Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 6.8e-72 273.9 136 100.0
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.2e-52 209.9 124 83.1
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 6.0e-52 207.6 124 83.1
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 3.3e-50 201.8 124 79.0
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 1.6e-49 199.5 124 77.4
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 3.6e-49 198.4 124 79.8
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 6.2e-49 197.6 124 77.4
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 1.4e-48 196.4 124 77.4
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 1.8e-48 196.1 124 76.6
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 3.1e-48 195.3 125 76.8
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 4.0e-48 194.9 124 76.6
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 6.9e-48 194.1 125 78.4
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 6.9e-48 194.1 124 77.4
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 6.9e-48 194.1 124 76.6
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 9.0e-48 193.7 125 73.6
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 9.0e-48 193.7 124 76.6
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 9.0e-48 193.7 124 76.6
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 1.2e-47 193.4 126 72.2
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 2.0e-47 192.6 124 75.8
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 2.6e-47 192.2 124 74.2
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 3.4e-47 191.8 124 75.8
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 3.4e-47 191.8 124 75.8
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 4.5e-47 191.4 124 76.6
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 7.6e-47 190.7 124 75.0
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 1.3e-46 189.9 124 75.0
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 3.8e-46 188.3 125 75.2
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 4.9e-46 188.0 124 75.8
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 1.4e-45 186.4 124 75.0
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 1.4e-45 186.4 132 69.7
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 1.9e-45 186.0 125 74.4
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.9e-45 186.0 124 71.0
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 3.2e-45 185.3 124 72.6
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 7.1e-45 184.1 124 72.6
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 7.1e-45 184.1 124 72.6
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 9.3e-45 183.7 124 74.2
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 9.3e-45 183.7 124 74.2
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.2e-44 183.3 124 74.2
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 1.6e-44 183.0 124 72.6
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 3.5e-44 181.8 124 71.8
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 6.0e-44 181.0 125 72.8
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 7.9e-44 180.6 124 71.8
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 1.0e-43 180.3 124 71.0
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 1.3e-43 179.9 124 72.6
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 2.3e-43 179.1 125 72.0
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 3.0e-43 178.7 125 69.6
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 3.9e-43 178.3 124 69.4
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 5.1e-43 177.9 117 76.1
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 6.7e-43 177.6 159 59.7
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 2.8e-41 172.2 124 67.7
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 4.8e-41 171.4 125 67.2
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 4.8e-41 171.4 121 68.6
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 4.8e-41 171.4 124 66.9
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 3.1e-40 168.7 124 66.1
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 3.1e-40 168.7 124 66.1
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 4.0e-40 168.3 124 66.9
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 9.0e-40 167.2 124 66.1
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 3.4e-39 165.2 124 64.5
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 3.4e-39 165.2 137 61.3
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 4.5e-39 164.9 124 66.9
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 4.5e-39 164.9 125 67.2
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.3e-38 163.3 124 63.7
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.3e-38 163.3 124 69.4
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 2.2e-38 162.5 125 65.6
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 2.9e-38 162.2 124 66.1
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 8.4e-38 160.6 124 65.3
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 8.4e-38 160.6 125 62.4
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 1.4e-37 159.8 124 64.5
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 1.4e-37 159.8 124 64.5
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 1.4e-37 159.8 124 64.5
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 2.4e-37 159.1 124 64.5
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 2.4e-37 159.1 124 64.5
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 3.2e-37 158.7 121 67.8
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 4.2e-37 158.3 124 64.5
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 5.5e-37 157.9 124 62.9
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 9.3e-37 157.1 121 67.8
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 1.6e-36 156.4 125 64.0
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 1.6e-36 156.4 125 64.0
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 2.7e-36 155.6 124 62.1
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 2.7e-36 155.6 124 63.7
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 3.5e-36 155.2 124 62.9
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 3.5e-36 155.2 124 63.7
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 4.6e-36 154.8 125 60.8
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 7.9e-36 154.1 124 61.3
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 1.8e-35 152.9 127 62.2
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 1.8e-35 152.9 127 62.2
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 1.8e-35 152.9 127 62.2
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 3.0e-35 152.1 124 60.5
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 8.7e-35 150.6 125 60.0
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 8.7e-35 150.6 124 60.5
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 1.1e-34 150.2 125 62.4
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 5.6e-34 147.9 130 60.8
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 1.3e-33 146.7 125 56.0
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 2.1e-33 146.0 125 60.8
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 4.8e-33 144.8 126 57.9
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 4.8e-33 144.8 125 56.8
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 2.4e-32 142.5 124 58.9
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 8.4e-30 134.0 124 56.5
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.2e-28 130.2 128 50.0
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-28 129.0 125 52.0
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 2.7e-28 129.0 82 78.0
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 3.3e-26 122.1 112 59.8
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 4.1e-24 115.2 128 53.1
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 4.1e-24 115.2 124 50.0
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 1.5e-23 113.2 75 70.7
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-23 112.1 132 51.5
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 5.9e-23 111.3 132 51.5
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 1.0e-22 110.5 72 75.0
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 1.7e-22 109.8 124 46.0
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 4.2e-21 105.1 148 43.9
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 4.6e-20 101.7 134 43.3
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 6.1e-20 101.3 75 68.0
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 1.0e-19 100.5 128 41.4
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-18 97.1 134 47.0
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-18 96.7 130 41.5
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-18 96.7 133 39.8
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 3.3e-18 95.5 133 41.4
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 1.3e-17 93.6 129 41.1
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 6.3e-17 91.3 71 67.6
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 3.1e-16 89.0 140 34.3
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 6.9e-16 87.8 129 41.1
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 9.1e-16 87.4 125 41.6
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 9.1e-16 87.4 128 36.7
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-15 87.0 125 41.6
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 2.0e-15 86.3 76 60.5
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-15 85.1 101 43.6
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 1.0e-14 84.0 124 38.7
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 5.0e-14 81.6 132 36.4
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-13 80.1 145 33.8
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 2.5e-13 79.3 132 35.6
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 2.5e-13 79.3 120 35.8
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 3.2e-13 79.0 134 35.1
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 7.2e-13 77.8 103 43.7
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 7.2e-13 77.8 123 39.0
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 2.1e-12 76.3 125 32.8
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 2.7e-12 75.9 75 50.7
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 1.1e-10 70.5 63 50.8
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 3.3e-10 68.9 136 33.1
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 3.3e-10 68.9 125 32.8
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 9.7e-10 67.4 114 37.7
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-09 67.0 126 33.3
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-08 63.9 125 31.2
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.8e-08 63.2 126 27.0
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-07 60.5 119 28.6
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-07 60.1 143 28.7
Atru.chr5.2738 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-07 59.3 124 31.5
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-07 59.3 66 53.0
Dinv01344 Davidia involucrata HOM05D065005 ORTHO05D005623 1.3e-06 57.0 30 80.0
Atru.chr6.94 Acer truncatum HOM05D004737 ORTHO05D005623 1.7e-06 56.6 64 50.0
Medtr5g038850 Medicago truncatula HOM05D004737 ORTHO05D005623 1.7e-06 56.6 128 31.2
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.2e-06 56.2 116 29.3
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 3.8e-06 55.5 92 32.6


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