Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0008520 Simmondsia chinensis HOM05D000560 ORTHO05D389480 7.5e-107 390.6 203 100.0
AT5G12080 Arabidopsis thaliana HOM05D000560 ORTHO05D000417 9.4e-09 64.7 118 34.7
CARHR201050 Cardamine hirsuta HOM05D000560 ORTHO05D000417 1.8e-07 60.5 149 28.2
Sed0011979 Sechium edule HOM05D000560 ORTHO05D000417 1.8e-07 60.5 107 39.3
C03p06290 Brassica napus HOM05D000560 ORTHO05D000417 3.0e-07 59.7 148 28.4
BolC3t13137H Brassica oleracea HOM05D000560 ORTHO05D000417 3.0e-07 59.7 148 28.4
A03p05400 Brassica napus HOM05D000560 ORTHO05D000417 6.7e-07 58.5 118 32.2
BraA03t09879Z Brassica rapa HOM05D000560 ORTHO05D000417 6.7e-07 58.5 118 32.2
Lj7A225T45 Lonicera japonica HOM05D000560 ORTHO05D000417 6.7e-07 58.5 93 33.3
Lj7A228T31 Lonicera japonica HOM05D000560 ORTHO05D000417 8.8e-07 58.2 90 34.4
Sed0004637 Sechium edule HOM05D000560 ORTHO05D000417 1.1e-06 57.8 99 37.4
Carub.0006s1059 Capsella rubella HOM05D000560 ORTHO05D000417 2.6e-06 56.6 118 31.4
ECA234G1451 Erigeron canadensis HOM05D000560 ORTHO05D000417 2.6e-06 56.6 117 31.6
Lj8A482T27 Lonicera japonica HOM05D000560 ORTHO05D000417 2.6e-06 56.6 145 29.0
MD15G1214500 Malus domestica HOM05D000560 ORTHO05D000417 3.3e-06 56.2 102 35.3
A02p01360 Brassica napus HOM05D000560 ORTHO05D000417 4.4e-06 55.8 103 34.0
C02p05600 Brassica napus HOM05D000560 ORTHO05D000417 4.4e-06 55.8 103 34.0
BolC2t06504H Brassica oleracea HOM05D000560 ORTHO05D000417 4.4e-06 55.8 103 34.0
CANSAT56G1003 Cannabis sativa HOM05D000560 ORTHO05D000417 7.4e-06 55.1 139 31.7
MD15G1214600 Malus domestica HOM05D000560 ORTHO05D000417 7.4e-06 55.1 102 36.3
BcaC03g13410 Brassica carinata HOM05D000560 ORTHO05D000417 9.7e-06 54.7 103 34.0
BraA02t05115Z Brassica rapa HOM05D000560 ORTHO05D000417 9.7e-06 54.7 103 34.0
ClCG05G015660 Citrullus lanatus HOM05D000560 ORTHO05D000417 9.7e-06 54.7 106 33.0
Sp6g31540 Schrenkiella parvula HOM05D000560 ORTHO05D000417 9.7e-06 54.7 110 30.0


User provided reference genes

Program Settings