Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0006000 Simmondsia chinensis HOM05D005337 ORTHO05D006567 3.8e-165 586.3 823 100.0
Ah.01g015050 Amaranthus hybridus HOM05D005337 ORTHO05D006567 5.8e-65 253.4 296 50.0
Dinv21523 Davidia involucrata HOM05D005337 ORTHO05D006567 1.7e-61 241.9 280 54.3
QL05p055125 Quercus lobata HOM05D005337 ORTHO05D006567 3.6e-59 234.2 147 78.9
Hund17688 Selenicereus undatus HOM05D005337 ORTHO05D006567 2.3e-58 231.5 278 50.0
Haze_05675 Corylus avellana HOM05D005337 ORTHO05D006567 3.1e-58 231.1 210 63.8
Manes.01G172900 Manihot esculenta HOM05D005337 ORTHO05D006567 5.2e-58 230.3 180 65.6
Cfa000901 Carpinus fangiana HOM05D005337 ORTHO05D006567 6.8e-58 229.9 146 76.7
Prupe.4G085500 Prunus persica HOM05D005337 ORTHO05D006567 1.5e-57 228.8 280 52.1
CiPaw.09G119800 Carya illinoinensis HOM05D005337 ORTHO05D006567 2.0e-57 228.4 146 77.4
EL10Ac9g22478 Beta vulgaris HOM05D005337 ORTHO05D006567 2.6e-57 228.0 263 47.9
Nn3g20334 Nelumbo nucifera HOM05D005337 ORTHO05D006567 3.4e-57 227.6 258 52.3
AUR62025016 Chenopodium quinoa HOM05D005337 ORTHO05D006567 6.4e-56 223.4 154 67.5
Ciclev10014263m.g Citrus clementina HOM05D005337 ORTHO05D006567 1.4e-55 222.2 196 60.2
MD10G1258300 Malus domestica HOM05D005337 ORTHO05D006567 1.4e-55 222.2 286 51.7
AUR62017465 Chenopodium quinoa HOM05D005337 ORTHO05D006567 3.2e-55 221.1 154 67.5
TWI73G0840 Tripterygium wilfordii HOM05D005337 ORTHO05D006567 4.1e-55 220.7 146 75.3
FAN21G3303 Fragaria x ananassa HOM05D005337 ORTHO05D006567 9.2e-55 219.5 285 48.4
Duzib235G0011 Durio zibethinus HOM05D005337 ORTHO05D006567 1.2e-54 219.2 177 64.4
COL.COLO4_31011 Corchorus olitorius HOM05D005337 ORTHO05D006567 2.1e-54 218.4 177 65.0
FAN25G3288 Fragaria x ananassa HOM05D005337 ORTHO05D006567 2.7e-54 218.0 283 48.8
Lj2C569T6 Lonicera japonica HOM05D005337 ORTHO05D006567 3.5e-54 217.6 151 72.2
Actinidia13442 Actinidia chinensis HOM05D005337 ORTHO05D006567 6.0e-54 216.9 170 65.3
TAR624G0614 Trochodendron aralioides HOM05D005337 ORTHO05D006567 1.3e-53 215.7 286 50.7
TAR624G0918 Trochodendron aralioides HOM05D005337 ORTHO05D006567 3.0e-53 214.5 282 51.1
FvH4_3g05050 Fragaria vesca HOM05D005337 ORTHO05D006567 5.1e-53 213.8 285 48.4
FAN11G3121 Fragaria x ananassa HOM05D005337 ORTHO05D006567 5.1e-53 213.8 285 48.4
FAN16G3117 Fragaria x ananassa HOM05D005337 ORTHO05D006567 6.6e-53 213.4 266 50.4
TPR.G4722 Trifolium pratense HOM05D005337 ORTHO05D006567 6.6e-53 213.4 156 67.9
DCAR_004624 Daucus carota HOM05D005337 ORTHO05D000307 8.6e-53 213.0 151 69.5
Sp1g26130 Schrenkiella parvula HOM05D005337 ORTHO05D006567 8.6e-53 213.0 156 67.3
Lj6g0017822 Lotus japonicus HOM05D005337 ORTHO05D006567 2.5e-52 211.5 150 68.7
BcaC05g27061 Brassica carinata HOM05D005337 ORTHO05D006567 5.6e-52 210.3 155 69.0
C05p29200 Brassica napus HOM05D005337 ORTHO05D006567 5.6e-52 210.3 155 69.0
BolC5t31652H Brassica oleracea HOM05D005337 ORTHO05D006567 5.6e-52 210.3 155 69.0
Atru.BG.302.p Acer truncatum HOM05D005337 ORTHO05D006567 7.3e-52 209.9 125 79.2
Aa31LG6G5450 Aethionema arabicum HOM05D005337 ORTHO05D006567 7.3e-52 209.9 156 68.6
Thhalv10006807m.g Eutrema salsugineum HOM05D005337 ORTHO05D006567 7.3e-52 209.9 156 67.3
Glyma.15G090700 Glycine max HOM05D005337 ORTHO05D006567 9.6e-52 209.5 160 65.6
Gorai.011G048000 Gossypium raimondii HOM05D005337 ORTHO05D006567 9.6e-52 209.5 179 62.0
RcHm_v2.0_Chr3g0490541 Rosa chinensis HOM05D005337 ORTHO05D006567 9.6e-52 209.5 127 79.5
Thecc.06G144500 Theobroma cacao HOM05D005337 ORTHO05D006567 1.6e-51 208.8 280 48.9
Gohir.D10G045100 Gossypium hirsutum HOM05D005337 ORTHO05D006567 2.8e-51 208.0 258 49.6
Phvul.006G168127 Phaseolus vulgaris HOM05D005337 ORTHO05D006567 4.7e-51 207.2 156 67.3
C05p29160 Brassica napus HOM05D005337 ORTHO05D006567 6.2e-51 206.8 234 53.4
CSS0008957 Camellia sinensis var. sinensis HOM05D005337 ORTHO05D006567 8.1e-51 206.5 156 69.2
Gohir.A10G043900 Gossypium hirsutum HOM05D005337 ORTHO05D006567 8.1e-51 206.5 260 49.6
Medtr2g018550 Medicago truncatula HOM05D005337 ORTHO05D006567 1.1e-50 206.1 231 50.2
BcaC05g27058 Brassica carinata HOM05D005337 ORTHO05D006567 1.4e-50 205.7 234 53.0
Glyma.13G221600 Glycine max HOM05D005337 ORTHO05D006567 1.4e-50 205.7 154 66.9
BolC5t31647H Brassica oleracea HOM05D005337 ORTHO05D006567 2.4e-50 204.9 234 53.0
BraA09t39143Z Brassica rapa HOM05D005337 ORTHO05D006567 2.4e-50 204.9 150 69.3
arahy.Tifrunner.gnm1.ann1.QR7D30 Arachis hypogaea HOM05D005337 ORTHO05D006567 6.9e-50 203.4 130 74.6
A09p36160 Brassica napus HOM05D005337 ORTHO05D006567 6.9e-50 203.4 150 68.0
VMungo0540G1354 Vigna mungo HOM05D005337 ORTHO05D006567 6.9e-50 203.4 181 60.8
AT1G30290 Arabidopsis thaliana HOM05D005337 ORTHO05D006567 9.0e-50 203.0 155 67.1
Carub.0001s2852 Capsella rubella HOM05D005337 ORTHO05D006567 1.2e-49 202.6 176 64.2
AL1G44240 Arabidopsis lyrata HOM05D005337 ORTHO05D006567 2.6e-49 201.4 154 66.9
CARHR029680 Cardamine hirsuta HOM05D005337 ORTHO05D006567 2.6e-49 201.4 265 47.5
Psat3g019680 Pisum sativum HOM05D005337 ORTHO05D006567 2.6e-49 201.4 152 65.1
CANSAT35G0686 Cannabis sativa HOM05D005337 ORTHO05D006567 4.4e-49 200.7 151 66.9
Cc11_g05070 Coffea canephora HOM05D005337 ORTHO05D006567 5.8e-49 200.3 159 64.8
PGR035G0002 Punica granatum HOM05D005337 ORTHO05D006567 7.6e-49 199.9 139 71.9
BcaB07g32639 Brassica carinata HOM05D005337 ORTHO05D006567 9.9e-49 199.5 179 66.5
MBI18_g11220_MAGBIO Magnolia biondii HOM05D005337 ORTHO05D006567 1.3e-48 199.1 148 68.9
Nitab4.5_0002071g0050 Nicotiana tabacum HOM05D005337 ORTHO05D006567 1.3e-48 199.1 292 45.9
Migut.M00881 Erythranthe guttata HOM05D005337 ORTHO05D006567 1.7e-48 198.7 150 65.3
Eucgr.E02454 Eucalyptus grandis HOM05D005337 ORTHO05D006567 2.9e-48 198.0 156 62.2
MSTRG.7512 Avicennia marina HOM05D005337 ORTHO05D006567 4.9e-48 197.2 155 64.5
THA.LOC104820664 Tarenaya hassleriana HOM05D005337 ORTHO05D006567 4.9e-48 197.2 182 61.0
Nitab4.5_0000315g0050 Nicotiana tabacum HOM05D005337 ORTHO05D006567 8.4e-48 196.4 188 56.4
Cfa000900 Carpinus fangiana HOM05D005337 ORTHO05D006567 1.1e-47 196.1 177 63.3
arahy.Tifrunner.gnm1.ann1.RN8PQ8 Arachis hypogaea HOM05D005337 ORTHO05D006567 4.2e-47 194.1 179 59.2
arahy.Tifrunner.gnm1.ann1.WGPX7I Arachis hypogaea HOM05D005337 ORTHO05D006567 4.2e-47 194.1 179 59.2
CDE05G0694 Ceratophyllum demersum HOM05D005337 ORTHO05D006567 4.2e-47 194.1 163 57.1
vmacro03433 Vaccinium macrocarpon HOM05D005337 ORTHO05D006567 7.1e-47 193.4 274 43.4
PSO384G4021 Papaver somniferum HOM05D005337 ORTHO05D006567 4.6e-46 190.7 154 62.3
QL07p034390 Quercus lobata HOM05D005337 ORTHO05D006567 6.0e-46 190.3 134 71.6
CDE02G1473 Ceratophyllum demersum HOM05D005337 ORTHO05D006567 7.8e-46 189.9 155 58.1
SalBow8G2351 Salvia bowleyana HOM05D005337 ORTHO05D006567 7.8e-46 189.9 256 46.9
Rhsim09G0050900 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.0e-45 189.5 124 73.4
CAN.G36.25 Capsicum annuum HOM05D005337 ORTHO05D006567 1.7e-45 188.7 161 60.2
Solyc08g023490.4 Solanum lycopersicum HOM05D005337 ORTHO05D006567 1.7e-45 188.7 183 56.8
Sopen08g008640 Solanum pennellii HOM05D005337 ORTHO05D006567 1.7e-45 188.7 195 54.4
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 3.0e-45 188.0 137 68.6
Peaxi162Scf00045g00242 Petunia axillaris HOM05D005337 ORTHO05D006567 6.6e-45 186.8 288 44.4
Sed0025020 Sechium edule HOM05D005337 ORTHO05D006567 1.1e-44 186.0 141 64.5
Potri.011G082300 Populus trichocarpa HOM05D005337 ORTHO05D006567 5.6e-44 183.7 132 68.2
Sabra11G0065300 Salix brachista HOM05D005337 ORTHO05D006567 5.6e-44 183.7 123 73.2
GSVIVG01021547001 Vitis vinifera HOM05D005337 ORTHO05D006567 1.3e-43 182.6 256 45.3
ClCG01G024880 Citrullus lanatus HOM05D005337 ORTHO05D006567 6.2e-43 180.3 283 46.6
PGSC0003DMG400002287 Solanum tuberosum HOM05D005337 ORTHO05D006567 6.2e-43 180.3 203 50.2
MELO3C007107.2 Cucumis melo HOM05D005337 ORTHO05D006567 1.4e-42 179.1 281 43.1
HPP92_001622 Vanilla planifolia HOM05D005337 ORTHO05D006567 3.1e-42 177.9 151 60.3
Aqoxy6G00107 Aquilegia oxysepala HOM05D005337 ORTHO05D006567 6.9e-42 176.8 288 44.4
SGA_v2.0_scaffold223G42824 Striga asiatica HOM05D005337 ORTHO05D006567 9.0e-42 176.4 127 69.3
CsaV3_6G052010 Cucumis sativus L. HOM05D005337 ORTHO05D006567 1.5e-41 175.6 282 43.6
SHI24905 Sapria himalayana HOM05D005337 ORTHO05D006567 2.0e-41 175.3 162 54.9
HanXRQChr04g0116581 Helianthus annuus HOM05D005337 ORTHO05D006567 6.4e-40 170.2 129 59.7
Lsat_1_v5_gn_7_27480 Lactuca sativa HOM05D005337 ORTHO05D006567 1.5e-36 159.1 117 62.4
ATR1098G077 Amborella trichopoda HOM05D005337 ORTHO05D006567 7.4e-36 156.8 148 56.1
Cpa.g.sc17.49 Carica papaya HOM05D005337 ORTHO05D006567 2.4e-34 151.8 97 76.3
Os12g0615600 Oryza sativa ssp. japonica HOM05D005337 ORTHO05D006567 3.4e-33 147.9 135 59.3
Oeu032720.1 Olea europaea HOM05D005337 ORTHO05D006567 2.2e-32 145.2 154 51.9
Zm00001eb134800 Zea mays HOM05D005337 ORTHO05D006567 2.9e-32 144.8 126 59.5
unitig_37.g12089 Utricularia gibba HOM05D005337 ORTHO05D006567 1.2e-30 139.4 109 61.5
Sc05g0005990 Simmondsia chinensis HOM05D005337 ORTHO05D006567 2.1e-30 138.7 81 80.2
RcHm_v2.0_Chr5g0014911 Rosa chinensis HOM05D005337 ORTHO05D006567 2.7e-30 138.3 105 64.8
FAN21G0118 Fragaria x ananassa HOM05D005337 ORTHO05D006567 6.0e-30 137.1 104 65.4
RcHm_v2.0_Chr3g0490551 Rosa chinensis HOM05D005337 ORTHO05D006567 3.9e-29 134.4 105 63.8
Rhsim13G0117400 Rhododendron simsii HOM05D005337 ORTHO05D006567 8.7e-29 133.3 101 64.4
CAN.G36.12 Capsicum annuum HOM05D005337 ORTHO05D006567 9.6e-28 129.8 107 59.8
ECA236G3236 Erigeron canadensis HOM05D005337 ORTHO05D006567 2.1e-27 128.6 109 59.6
TAR624G0810 Trochodendron aralioides HOM05D005337 ORTHO05D006567 6.5e-24 117.1 107 61.7
Nitab4.5_0000258g0100 Nicotiana tabacum HOM05D005337 ORTHO05D006567 1.4e-23 115.9 152 46.1
A09p36200 Brassica napus HOM05D005337 ORTHO05D006567 3.2e-23 114.8 99 56.6
Ca_00508_v3 Cicer arietinum L. HOM05D005337 ORTHO05D006567 7.1e-23 113.6 107 60.7
Lalb_Chr15g0086601 Lupinus albus HOM05D005337 ORTHO05D006567 6.0e-22 110.5 77 70.1
SEGI_37079 Sequoiadendron giganteum HOM05D005337 ORTHO05D006567 3.3e-20 104.8 107 49.5
BolC5t31646H Brassica oleracea HOM05D005337 ORTHO05D006567 1.1e-18 99.8 109 55.0
Atru.chr10.1089 Acer truncatum HOM05D005337 ORTHO05D006567 6.9e-18 97.1 71 66.2
Ca_18255_v3 Cicer arietinum L. HOM05D000068 ORTHO05D006567 1.9e-15 89.0 84 52.4
arahy.Tifrunner.gnm1.ann1.W21Z3V Arachis hypogaea HOM05D005337 ORTHO05D006567 3.2e-15 88.2 61 68.9
SEGI_28981 Sequoiadendron giganteum HOM05D005337 ORTHO05D006567 4.2e-15 87.8 80 52.5
MD05G1279600 Malus domestica HOM05D005337 ORTHO05D006567 9.3e-15 86.7 49 87.8
arahy.Tifrunner.gnm1.ann1.S6HMEC Arachis hypogaea HOM05D005337 ORTHO05D006567 1.2e-14 86.3 81 55.6
arahy.Tifrunner.gnm1.ann1.1U5Z8B Arachis hypogaea HOM05D005337 ORTHO05D006567 6.7e-13 80.5 95 46.3
BraA09t39145Z Brassica rapa HOM05D005337 ORTHO05D006567 8.7e-13 80.1 57 63.2
SEGI_04521 Sequoiadendron giganteum HOM05D005337 ORTHO05D009920 6.9e-10 70.5 109 33.0
AagrBONN_evm.TU.Sc2ySwM_344.1991 Anthoceros agrestis HOM05D004079 ORTHO05D008352 1.0e-08 66.6 134 29.1
CAN.G771.41 Capsicum annuum HOM05D006740 ORTHO05D008571 1.7e-08 65.9 109 29.4
Medtr2g018580 Medicago truncatula HOM05D005337 ORTHO05D006567 1.7e-08 65.9 57 57.9
Aqoxy2G00263 Aquilegia oxysepala HOM05D005973 ORTHO05D007285 2.9e-08 65.1 116 33.6
Dinv32060 Davidia involucrata HOM05D005973 ORTHO05D007285 5.0e-08 64.3 116 32.8
TAR623G1644 Trochodendron aralioides HOM05D005973 ORTHO05D007285 8.5e-08 63.5 116 33.6
TAR623G1677 Trochodendron aralioides HOM05D005973 ORTHO05D007285 2.5e-07 62.0 116 32.8
AagrBONN_evm.TU.Sc2ySwM_362.2678__2679 Anthoceros agrestis HOM05D006749 ORTHO05D008352 3.2e-07 61.6 101 37.6
CANSAT78G1021 Cannabis sativa HOM05D006926 ORTHO05D008863 9.4e-07 60.1 124 30.6
Peaxi162Scf00046g00155 Petunia axillaris HOM05D006740 ORTHO05D008571 9.4e-07 60.1 109 27.5
Solyc12g019290.1 Solanum lycopersicum HOM05D006740 ORTHO05D008571 9.4e-07 60.1 109 27.5
Sopen12g009600 Solanum pennellii HOM05D006740 ORTHO05D008571 9.4e-07 60.1 109 27.5
PGSC0003DMG400020392 Solanum tuberosum HOM05D006740 ORTHO05D008571 9.4e-07 60.1 109 27.5
Lj2C113T11 Lonicera japonica HOM05D006740 ORTHO05D008571 1.2e-06 59.7 109 27.5
Lj7A578T58 Lonicera japonica HOM05D005973 ORTHO05D007285 1.2e-06 59.7 116 31.0
Lsat_1_v5_gn_6_30921 Lactuca sativa HOM05D006740 ORTHO05D008571 1.6e-06 59.3 109 29.4
DCAR_017698 Daucus carota HOM05D006740 ORTHO05D008571 2.7e-06 58.5 109 26.6
TWI74G0655 Tripterygium wilfordii HOM05D006740 ORTHO05D008571 2.7e-06 58.5 131 26.7
AagrBONN_evm.TU.Sc2ySwM_228.1237 Anthoceros agrestis HOM05D006749 ORTHO05D008352 4.7e-06 57.8 97 32.0
MSTRG.19161 Avicennia marina HOM05D006740 ORTHO05D008571 4.7e-06 57.8 148 25.0
PSO339G1208 Papaver somniferum HOM05D005973 ORTHO05D007285 4.7e-06 57.8 116 29.3
SEGI_16657 Sequoiadendron giganteum HOM05D005337 ORTHO05D023551 4.7e-06 57.8 117 29.1
TWI15G0380 Tripterygium wilfordii HOM05D004079 ORTHO05D005437 4.7e-06 57.8 123 31.7
TAR623G1146 Trochodendron aralioides HOM05D005973 ORTHO05D007285 4.7e-06 57.8 116 31.9
Nitab4.5_0003215g0040 Nicotiana tabacum HOM05D006740 ORTHO05D008571 6.1e-06 57.4 109 24.8
PSO384G2338 Papaver somniferum HOM05D005973 ORTHO05D007285 6.1e-06 57.4 116 29.3
Dinv05038 Davidia involucrata HOM05D005973 ORTHO05D007285 7.9e-06 57.0 116 31.0


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