Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 8.6e-213 743.4 384 100.0
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 2.2e-120 436.4 381 58.0
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 9.1e-114 414.5 374 57.8
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 2.0e-108 396.7 445 49.9
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 1.8e-106 390.2 383 52.0
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 3.1e-106 389.4 397 51.1
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 5.4e-106 388.7 403 54.3
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 4.5e-105 385.6 380 51.8
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 8.6e-104 381.3 427 48.7
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 8.9e-101 371.3 375 51.7
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.2e-100 370.9 382 51.3
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 6.4e-99 365.2 379 50.1
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 2.0e-97 360.1 385 50.6
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 2.0e-97 360.1 374 50.5
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 8.6e-96 354.8 388 48.2
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 1.5e-95 354.0 388 48.5
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 7.3e-95 351.7 384 49.0
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.2e-94 350.9 381 49.9
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.0e-93 347.8 382 49.7
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 4.0e-93 345.9 371 49.1
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 5.2e-93 345.5 379 50.7
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 1.2e-92 344.4 378 46.3
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 1.2e-92 344.4 389 47.8
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 7.5e-92 341.7 382 47.9
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 9.8e-92 341.3 378 47.1
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.7e-91 340.5 373 49.1
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 2.4e-90 336.7 378 47.1
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 4.1e-90 335.9 384 47.7
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 3.5e-89 332.8 380 47.6
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 1.1e-87 327.8 347 50.1
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 5.6e-87 325.5 415 45.3
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 7.3e-87 325.1 382 44.5
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 7.3e-87 325.1 383 46.7
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 2.1e-86 323.6 373 45.0
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 4.7e-86 322.4 383 47.3
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 1.1e-85 321.2 384 45.1
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.4e-85 320.9 383 44.6
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 4.0e-85 319.3 375 48.3
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 5.2e-85 318.9 363 46.3
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 5.2e-85 318.9 368 46.2
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 8.9e-85 318.2 387 48.1
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.4e-84 315.8 381 44.1
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.3e-83 314.3 381 44.4
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.2e-83 313.5 338 46.4
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.9e-83 313.2 381 44.9
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 4.9e-83 312.4 381 44.6
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 3.2e-82 309.7 436 41.5
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 7.1e-82 308.5 381 44.6
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 9.2e-82 308.1 387 43.4
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 3.5e-81 306.2 380 44.7
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.7e-80 303.9 318 48.4
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 1.1e-79 301.2 378 45.8
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 7.3e-79 298.5 387 43.4
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.6e-78 297.4 319 48.0
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 2.3e-77 293.5 385 41.8
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 4.0e-77 292.7 535 34.2
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 1.2e-76 291.2 323 47.7
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 2.6e-76 290.0 385 43.9
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 4.4e-76 289.3 388 40.2
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 5.8e-76 288.9 379 41.2
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 5.8e-76 288.9 388 39.9
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 7.6e-76 288.5 391 40.2
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 9.9e-76 288.1 379 41.4
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 2.9e-75 286.6 263 54.8
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 6.4e-75 285.4 388 39.7
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 8.4e-75 285.0 388 39.4
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 5.4e-74 282.3 388 39.4
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 2.1e-73 280.4 314 47.8
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 6.0e-73 278.9 385 40.0
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 1.0e-72 278.1 393 39.4
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 1.3e-72 277.7 393 39.4
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.3e-72 277.7 318 45.6
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.0e-72 276.6 227 63.4
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 1.5e-71 274.2 379 38.8
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.9e-71 273.9 360 42.5
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 7.3e-71 271.9 382 41.4
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 2.4e-69 266.9 354 41.8
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.6e-68 263.5 231 58.0
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.6e-65 254.2 231 55.8
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 1.7e-64 250.8 300 48.3
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 6.6e-64 248.8 366 40.4
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 8.1e-62 241.9 246 51.2
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 1.1e-61 241.5 325 43.1
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 1.1e-61 241.5 302 45.4
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 1.4e-61 241.1 408 37.3
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 6.9e-61 238.8 265 48.3
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 9.3e-58 228.4 233 51.9
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 6.2e-54 215.7 232 48.7
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.4e-53 214.5 291 43.0
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 5.8e-52 209.1 408 35.0
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.3e-48 198.0 243 44.9
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 2.3e-48 197.2 236 41.9
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 5.6e-47 192.6 399 34.3
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 8.2e-46 188.7 229 42.4
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.3e-34 148.7 119 63.9
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.3e-34 148.7 111 65.8
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 2.5e-31 140.6 186 41.4
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.3e-30 138.3 217 37.3
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 4.5e-28 129.8 211 37.4
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 5.7e-23 112.8 260 30.8
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 4.8e-22 109.8 375 27.7
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 3.4e-20 103.6 211 31.3
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 3.4e-20 103.6 150 43.3
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.4e-16 91.7 121 39.7
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.2e-14 84.3 110 40.9
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 2.8e-14 84.0 156 31.4
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 1.1e-13 82.0 183 31.1
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.6e-12 78.2 181 29.3
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 2.2e-11 74.3 105 35.2
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 5.5e-10 69.7 251 27.9
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 3.6e-09 67.0 113 34.5
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 2.8e-06 57.4 77 39.0


User provided reference genes

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