Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.2e-196 689.9 396 100.0
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.2e-111 407.5 294 70.1
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 4.4e-111 405.6 293 70.3
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 4.8e-110 402.1 293 69.6
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 8.3e-110 401.4 293 68.6
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 1.6e-108 397.1 329 66.0
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 5.0e-107 392.1 344 61.9
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 1.9e-106 390.2 293 66.6
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.5e-106 389.8 329 65.3
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 5.5e-106 388.7 302 65.2
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 7.2e-106 388.3 298 66.8
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 2.1e-105 386.7 290 67.2
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 2.7e-105 386.3 329 65.0
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 8.0e-105 384.8 332 65.4
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.0e-104 384.4 329 65.7
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.0e-104 384.4 262 71.8
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 2.3e-104 383.3 294 66.7
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 5.2e-104 382.1 293 65.5
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 6.8e-104 381.7 335 63.6
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 6.8e-104 381.7 281 68.3
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 1.5e-103 380.6 293 65.9
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 7.5e-103 378.3 262 70.2
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 1.3e-102 377.5 322 62.7
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 6.3e-102 375.2 336 62.2
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 8.3e-102 374.8 285 66.7
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 1.8e-101 373.6 299 64.5
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 5.0e-99 365.5 262 69.5
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 5.0e-99 365.5 301 63.1
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 8.6e-99 364.8 268 66.4
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.5e-98 364.0 301 62.8
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.5e-98 363.2 278 69.4
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 3.3e-98 362.8 302 61.9
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 5.5e-98 362.1 239 71.1
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 9.5e-98 361.3 293 63.1
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 1.6e-97 360.5 260 65.8
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 3.6e-97 359.4 260 68.1
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 3.6e-97 359.4 301 64.5
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 3.6e-97 359.4 253 68.4
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 6.1e-97 358.6 286 69.9
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.0e-96 357.8 242 70.2
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.4e-96 357.5 311 58.5
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 1.4e-96 357.5 256 67.2
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 3.0e-96 356.3 283 67.5
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 4.0e-96 355.9 304 60.5
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.5e-95 354.0 240 73.8
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 5.7e-95 352.1 275 63.3
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 7.5e-95 351.7 337 55.5
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 7.5e-95 351.7 297 60.3
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 9.8e-95 351.3 283 61.8
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.3e-94 350.9 300 60.0
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.7e-94 350.5 283 61.5
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 2.2e-94 350.1 302 64.2
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 2.2e-94 350.1 237 70.5
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 4.9e-94 349.0 294 60.9
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 6.3e-94 348.6 250 68.0
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 6.3e-94 348.6 242 69.4
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 8.3e-94 348.2 294 60.5
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 8.3e-94 348.2 251 67.7
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.1e-93 347.8 250 68.0
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.1e-93 347.8 253 68.0
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 1.8e-93 347.1 257 73.2
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 4.1e-93 345.9 273 65.6
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 4.1e-93 345.9 236 70.8
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 9.2e-93 344.7 243 68.3
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 1.6e-92 344.0 250 67.6
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 4.5e-92 342.4 238 68.1
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 5.0e-91 339.0 303 57.1
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 7.3e-90 335.1 264 68.2
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 1.6e-89 334.0 322 56.2
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 3.1e-88 329.7 234 69.2
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 7.5e-87 325.1 253 63.2
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.7e-86 323.9 265 66.8
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 7.0e-85 318.5 239 65.3
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.1e-81 307.0 299 58.9
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 2.3e-80 303.5 300 50.7
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 5.8e-79 298.9 241 62.7
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.1e-77 294.7 275 55.6
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 3.2e-77 293.1 212 67.0
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 4.9e-70 269.2 161 79.5
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 8.6e-67 258.5 173 71.1
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 1.5e-63 247.7 167 70.1
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 2.1e-60 237.3 204 58.8
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 8.7e-59 231.9 250 49.6
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 3.3e-58 229.9 236 50.8
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 1.8e-56 224.2 167 65.3
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 5.8e-55 219.2 167 65.3
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 5.1e-51 206.1 157 65.0
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 4.5e-47 193.0 136 68.4
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 3.7e-41 173.3 243 39.9
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 3.7e-41 173.3 242 37.2
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 4.0e-40 169.9 235 46.4
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 9.6e-34 148.7 162 46.9
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.3e-32 142.9 115 74.8
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.2e-25 120.9 74 70.3


User provided reference genes

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