Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 5.7e-65 250.8 126 100.0
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 4.7e-35 151.4 101 77.2
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 9.2e-31 137.1 77 88.3
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 1.7e-29 132.9 76 88.2
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.3e-29 132.5 97 71.1
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 3.0e-29 132.1 77 83.1
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 3.9e-29 131.7 77 83.1
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-29 131.0 76 85.5
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 8.6e-29 130.6 77 83.1
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.1e-28 130.2 77 81.8
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.1e-28 130.2 77 83.1
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 1.5e-28 129.8 76 84.2
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.5e-28 129.8 77 84.4
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 3.3e-28 128.6 76 84.2
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.3e-28 128.3 77 81.8
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.3e-28 128.3 77 81.8
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 1.2e-27 126.7 77 81.8
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 1.6e-27 126.3 76 82.9
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 1.6e-27 126.3 75 82.7
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 6.2e-27 124.4 76 81.6
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 1.8e-26 122.9 76 81.6
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 1.8e-26 122.9 75 78.7
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 2.4e-26 122.5 76 78.9
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 5.2e-26 121.3 75 77.3
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 6.8e-26 120.9 76 78.9
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 6.8e-26 120.9 76 78.9
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 1.5e-25 119.8 76 77.6
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 4.4e-25 118.2 76 80.3
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 5.8e-25 117.9 77 76.6
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 7.6e-25 117.5 75 77.3
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 9.9e-25 117.1 76 77.6
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 1.3e-24 116.7 77 75.3
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 1.3e-24 116.7 77 75.3
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 2.9e-24 115.5 77 75.3
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 3.8e-24 115.2 85 71.8
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 4.9e-24 114.8 77 70.1
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 8.4e-24 114.0 77 71.4
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 8.4e-24 114.0 77 71.4
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 8.4e-24 114.0 77 71.4
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 8.4e-24 114.0 77 71.4
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 8.4e-24 114.0 77 71.4
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 8.4e-24 114.0 77 71.4
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 8.4e-24 114.0 77 71.4
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 8.4e-24 114.0 77 71.4
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 2.4e-23 112.5 77 71.4
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 5.4e-23 111.3 77 70.1
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 1.6e-22 109.8 74 74.3
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 2.1e-22 109.4 77 68.8
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 1.7e-21 106.3 86 65.1
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 2.3e-21 105.9 78 67.9
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 5.1e-21 104.8 77 70.1
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 1.9e-20 102.8 74 70.3
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 2.1e-19 99.4 60 80.0
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 8.1e-19 97.4 66 69.7
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 1.8e-18 96.3 75 64.0
Nn010s41437 Nelumbo nucifera HOM05D006976 ORTHO05D008761 3.1e-18 95.5 55 81.8
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 4.0e-18 95.1 62 72.6
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 5.3e-18 94.7 81 61.7
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 4.4e-17 91.7 68 66.2
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 7.6e-17 90.9 76 59.2
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.7e-16 89.7 77 59.7
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.9e-16 89.0 58 70.7
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 2.9e-16 89.0 76 57.9
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 8.4e-16 87.4 76 56.6
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.0e-13 80.5 53 69.8
C09p40410 Brassica napus HOM05D006976 ORTHO05D008761 1.3e-13 80.1 56 64.3
Gorai.004G088500 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.3e-11 73.6 77 55.8
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.4e-10 70.1 40 82.5
MD10G1104000 Malus domestica HOM05D006976 ORTHO05D008761 6.9e-10 67.8 49 67.3
Nn021s41537 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.2e-09 67.0 66 59.1
HanXRQChr02g0041581 Helianthus annuus HOM05D000806 ORTHO05D002324 2.9e-08 62.4 100 45.0
Oeu062852.1 Olea europaea HOM05D006976 ORTHO05D008761 3.8e-08 62.0 37 70.3
BraSC103t45465Z Brassica rapa HOM05D006976 ORTHO05D008761 6.0e-06 54.7 50 58.0


User provided reference genes

Program Settings