Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 1.7e-63 246.1 148 100.0
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 3.3e-43 178.7 138 86.2
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 1.3e-28 130.2 145 68.3
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 6.6e-28 127.9 149 63.8
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 1.9e-27 126.3 144 68.8
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 7.3e-27 124.4 145 59.3
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 4.7e-26 121.7 138 73.2
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 6.2e-26 121.3 144 52.1
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 3.1e-25 119.0 141 68.1
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 8.9e-25 117.5 144 66.7
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 2.6e-24 115.9 145 51.0
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 3.4e-24 115.5 145 52.4
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 4.4e-24 115.2 143 50.3
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 2.9e-23 112.5 149 49.7
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 3.7e-23 112.1 145 52.4
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 6.4e-23 111.3 152 46.7
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 6.4e-23 111.3 151 62.9
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 8.3e-23 110.9 143 63.6
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 8.3e-23 110.9 144 54.2
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 2.4e-22 109.4 150 52.0
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 3.2e-22 109.0 150 60.0
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 3.2e-22 109.0 143 49.0
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 5.4e-22 108.2 147 50.3
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.4e-22 108.2 143 65.0
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 7.0e-22 107.8 139 55.4
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.2e-21 107.1 143 64.3
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 1.6e-21 106.7 157 45.2
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 7.8e-21 104.4 150 47.3
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 1.3e-20 103.6 150 64.7
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 2.3e-20 102.8 156 45.5
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 3.9e-20 102.1 134 66.4
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 3.9e-20 102.1 138 47.1
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 5.1e-20 101.7 143 63.6
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 6.6e-20 101.3 136 53.7
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 3.3e-19 99.0 150 47.3
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 9.5e-19 97.4 147 65.3
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 9.5e-19 97.4 148 54.7
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 9.5e-19 97.4 147 47.6
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.2e-18 97.1 145 62.1
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 1.2e-18 97.1 143 62.2
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 2.8e-18 95.9 139 62.6
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 3.6e-18 95.5 149 44.3
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 4.7e-18 95.1 164 41.5
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 6.2e-18 94.7 143 61.5
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 1.1e-17 94.0 143 60.8
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 1.1e-17 94.0 143 60.8
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 1.1e-17 94.0 146 48.6
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 1.4e-17 93.6 149 46.3
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 1.4e-17 93.6 148 46.6
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 2.3e-17 92.8 138 62.3
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 3.1e-17 92.4 143 59.4
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 3.1e-17 92.4 158 44.3
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 4.0e-17 92.0 145 62.8
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 5.2e-17 91.7 149 53.0
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 5.2e-17 91.7 156 45.5
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 8.9e-17 90.9 147 59.2
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 8.9e-17 90.9 143 60.1
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.2e-16 90.5 143 60.1
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 3.4e-16 89.0 138 60.9
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 5.8e-16 88.2 143 55.9
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 4.9e-15 85.1 142 59.2
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 1.1e-14 84.0 72 66.7
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 9.2e-14 80.9 150 46.0
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 9.2e-14 80.9 141 44.7
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.2e-13 80.5 150 46.7
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 2.1e-13 79.7 153 51.0
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 2.7e-13 79.3 149 50.3
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 2.7e-13 79.3 144 39.6
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 4.6e-13 78.6 161 36.6
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 1.3e-12 77.0 148 41.9
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 3.0e-12 75.9 151 44.4
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.5e-11 73.6 71 60.6
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 2.5e-11 72.8 133 54.9
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 2.5e-11 72.8 133 54.9
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 2.5e-11 72.8 133 54.9
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 2.5e-11 72.8 147 51.7
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 5.6e-11 71.6 150 41.3
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 7.3e-11 71.2 146 41.8
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 7.3e-11 71.2 150 48.7
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 9.5e-11 70.9 147 43.5
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 2.1e-10 69.7 146 47.9
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 2.8e-10 69.3 144 44.4
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 8.1e-10 67.8 152 41.4
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 3.1e-09 65.9 151 50.3
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 5.2e-09 65.1 147 41.5
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 1.2e-08 63.9 154 40.3
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 3.4e-08 62.4 147 50.3
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 4.4e-08 62.0 153 35.3
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 4.4e-08 62.0 146 36.3
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 1.3e-07 60.5 147 51.7
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 1.7e-07 60.1 145 51.7
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 1.7e-07 60.1 155 49.7
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 2.2e-07 59.7 148 39.2
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 4.9e-07 58.5 147 49.0
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 4.2e-06 55.5 147 37.4
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 9.2e-06 54.3 143 37.1


User provided reference genes

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