Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0007800 Simmondsia chinensis HOM05D004480 ORTHO05D005546 7.9e-250 866.7 452 100.0
Manes.17G005700 Manihot esculenta HOM05D004480 ORTHO05D005546 6.2e-186 654.4 473 73.8
QL11p020579 Quercus lobata HOM05D004480 ORTHO05D005546 1.7e-183 646.4 482 70.7
GSVIVG01038269001 Vitis vinifera HOM05D004480 ORTHO05D005546 1.1e-182 643.7 483 71.4
Thecc.05G221800 Theobroma cacao HOM05D004480 ORTHO05D005546 1.4e-182 643.3 463 73.2
CiPaw.01G203500 Carya illinoinensis HOM05D004480 ORTHO05D005546 2.4e-182 642.5 487 70.2
CSS0010781 Camellia sinensis var. sinensis HOM05D004480 ORTHO05D005546 7.1e-182 641.0 483 70.6
PGR119G0799 Punica granatum HOM05D004480 ORTHO05D005546 7.1e-182 641.0 464 72.4
Hund12181 Selenicereus undatus HOM05D004480 ORTHO05D005546 9.2e-182 640.6 481 73.4
Cfa008538 Carpinus fangiana HOM05D004480 ORTHO05D005546 1.2e-181 640.2 479 71.0
CsaV3_3G003300 Cucumis sativus L. HOM05D004480 ORTHO05D005546 1.6e-181 639.8 477 71.9
Duzib128G0969 Durio zibethinus HOM05D004480 ORTHO05D005546 3.5e-181 638.6 453 73.7
MD01G1035500 Malus domestica HOM05D004480 ORTHO05D005546 1.0e-180 637.1 485 69.7
Actinidia18384 Actinidia chinensis HOM05D004480 ORTHO05D005546 1.3e-180 636.7 466 72.7
Gohir.A08G013400 Gossypium hirsutum HOM05D004480 ORTHO05D005546 2.3e-180 636.0 480 71.5
Gorai.004G019100 Gossypium raimondii HOM05D004480 ORTHO05D005546 2.3e-180 636.0 480 71.2
Gohir.D08G023800 Gossypium hirsutum HOM05D004480 ORTHO05D005546 5.1e-180 634.8 480 71.2
Hma1.2p1_0513F.1_g169740 Hydrangea macrophylla HOM05D004480 ORTHO05D005546 6.6e-180 634.4 473 72.5
MELO3C013997.2 Cucumis melo HOM05D004480 ORTHO05D005546 1.1e-179 633.6 477 71.3
MD15G1320300 Malus domestica HOM05D004480 ORTHO05D005546 9.5e-179 630.6 485 69.1
Prupe.5G084300 Prunus persica HOM05D004480 ORTHO05D005546 3.6e-178 628.6 490 69.0
Cc03_g16200 Coffea canephora HOM05D004480 ORTHO05D005546 4.7e-178 628.2 475 70.7
Glyma.18G043300 Glycine max HOM05D004480 ORTHO05D005546 1.4e-177 626.7 478 69.5
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 1.4e-177 626.7 480 70.8
PGR083G0026 Punica granatum HOM05D004480 ORTHO05D005546 1.4e-177 626.7 476 71.4
Sed0006001 Sechium edule HOM05D004480 ORTHO05D005546 1.8e-177 626.3 478 70.3
FvH4_4g10760 Fragaria vesca HOM05D004480 ORTHO05D005546 5.2e-177 624.8 453 70.2
FAN12G3644 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.5e-176 623.2 453 70.2
RcHm_v2.0_Chr1g0334711 Rosa chinensis HOM05D004480 ORTHO05D005546 2.0e-176 622.9 483 67.7
SGA_v2.0_scaffold19G08907 Striga asiatica HOM05D004480 ORTHO05D005546 2.6e-176 622.5 477 72.1
SGA_v2.0_scaffold25G11023 Striga asiatica HOM05D004480 ORTHO05D005546 2.6e-176 622.5 485 69.9
MSTRG.22059 Avicennia marina HOM05D004480 ORTHO05D005546 4.4e-176 621.7 490 68.6
SalBow1G2458 Salvia bowleyana HOM05D004480 ORTHO05D005546 5.8e-176 621.3 463 70.8
Atru.chr11.1453 Acer truncatum HOM05D004480 ORTHO05D005546 2.2e-175 619.4 472 69.1
Atru.chr11.1483 Acer truncatum HOM05D004480 ORTHO05D005546 2.2e-175 619.4 472 69.1
FAN01G1951 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.9e-175 619.0 479 68.5
RcHm_v2.0_Chr7g0210541 Rosa chinensis HOM05D004480 ORTHO05D005546 3.8e-175 618.6 483 67.1
Ca_17076_v3 Cicer arietinum L. HOM05D004480 ORTHO05D005546 6.4e-175 617.8 474 68.4
FAN03G0050 Fragaria x ananassa HOM05D004480 ORTHO05D005546 6.4e-175 617.8 483 67.7
MBI07_g30868_MAGBIO Magnolia biondii HOM05D004480 ORTHO05D005546 8.4e-175 617.5 503 66.4
TAR626G1520 Trochodendron aralioides HOM05D004480 ORTHO05D005546 3.2e-174 615.5 517 65.0
Migut.N03010 Erythranthe guttata HOM05D004480 ORTHO05D005546 4.1e-174 615.1 467 71.9
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 4.1e-174 615.1 469 71.0
Ciclev10008180m.g Citrus clementina HOM05D004480 ORTHO05D005546 5.4e-174 614.8 475 69.7
Lj1g0018422 Lotus japonicus HOM05D004480 ORTHO05D005546 5.4e-174 614.8 478 68.4
vmacro20035 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 7.8e-173 610.9 486 68.1
arahy.Tifrunner.gnm1.ann1.0BX3U4 Arachis hypogaea HOM05D004480 ORTHO05D005546 1.0e-172 610.5 455 70.3
Solyc01g007120.3 Solanum lycopersicum HOM05D004480 ORTHO05D005546 1.0e-172 610.5 472 69.9
Sopen01g003100 Solanum pennellii HOM05D004480 ORTHO05D005546 2.3e-172 609.4 464 70.5
TAR623G1647 Trochodendron aralioides HOM05D004480 ORTHO05D005546 2.3e-172 609.4 517 64.2
BraA03t13931Z Brassica rapa HOM05D004480 ORTHO05D005546 5.1e-172 608.2 466 68.7
TPR.G4936 Trifolium pratense HOM05D004480 ORTHO05D005546 5.1e-172 608.2 478 68.4
BcaB01g00536 Brassica carinata HOM05D004480 ORTHO05D005546 6.6e-172 607.8 460 70.9
Eucgr.H00240 Eucalyptus grandis HOM05D004480 ORTHO05D005546 6.6e-172 607.8 464 69.4
THA.LOC104827565 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 8.7e-172 607.4 470 70.4
A03p48230 Brassica napus HOM05D004480 ORTHO05D005546 1.5e-171 606.7 460 68.9
CANSAT21G2297 Cannabis sativa HOM05D004480 ORTHO05D005546 1.5e-171 606.7 481 69.2
Phvul.001G227600 Phaseolus vulgaris HOM05D004480 ORTHO05D005546 1.9e-171 606.3 461 70.7
BcaC06g33042 Brassica carinata HOM05D004480 ORTHO05D005546 5.6e-171 604.7 457 68.9
FAN12G1968 Fragaria x ananassa HOM05D004480 ORTHO05D005546 7.3e-171 604.4 436 70.4
vmacro00734 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 7.3e-171 604.4 513 64.9
Oeu019179.1 Olea europaea HOM05D004480 ORTHO05D005546 1.2e-170 603.6 536 62.3
Medtr4g094615 Medicago truncatula HOM05D004480 ORTHO05D005546 2.1e-170 602.8 466 68.0
Lalb_Chr08g0233091 Lupinus albus HOM05D004480 ORTHO05D005546 2.8e-170 602.4 482 66.6
A01p23550 Brassica napus HOM05D004480 ORTHO05D005546 8.1e-170 600.9 458 69.2
BraA01t02261Z Brassica rapa HOM05D004480 ORTHO05D005546 1.1e-169 600.5 485 66.0
PGSC0003DMG400021321 Solanum tuberosum HOM05D004480 ORTHO05D005546 1.1e-169 600.5 474 68.1
C07p46260 Brassica napus HOM05D004480 ORTHO05D005546 1.4e-169 600.1 459 68.4
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 1.4e-169 600.1 484 66.5
BraA09t39892Z Brassica rapa HOM05D004480 ORTHO05D005546 1.8e-169 599.7 467 68.3
Sed0005158 Sechium edule HOM05D004480 ORTHO05D005546 2.4e-169 599.4 390 77.9
A09p44300 Brassica napus HOM05D004480 ORTHO05D005546 9.0e-169 597.4 458 68.6
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.2e-168 597.0 466 67.6
VMungo1383G0315 Vigna mungo HOM05D004480 ORTHO05D005546 1.2e-168 597.0 461 69.6
BcaNung06395 Brassica carinata HOM05D004480 ORTHO05D005546 1.5e-168 596.7 455 70.1
C01p29210 Brassica napus HOM05D004480 ORTHO05D005546 1.5e-168 596.7 455 70.1
SalBow6G1632 Salvia bowleyana HOM05D004480 ORTHO05D005546 7.6e-168 594.3 468 69.7
THA.LOC104802357 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 9.9e-168 594.0 459 72.3
Dinv41802 Davidia involucrata HOM05D004480 ORTHO05D005546 1.7e-167 593.2 388 78.4
Sp5g10950 Schrenkiella parvula HOM05D004480 ORTHO05D005546 1.7e-167 593.2 466 68.5
AL5G31690 Arabidopsis lyrata HOM05D004480 ORTHO05D005546 2.2e-167 592.8 456 69.5
TWI74G1000 Tripterygium wilfordii HOM05D004480 ORTHO05D005546 2.2e-167 592.8 472 67.8
BolC1t02850H Brassica oleracea HOM05D004480 ORTHO05D005546 8.4e-167 590.9 481 66.1
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 1.4e-166 590.1 449 70.6
Dinv39175 Davidia involucrata HOM05D004480 ORTHO05D005546 1.9e-166 589.7 462 68.8
VMungo1309G1911 Vigna mungo HOM05D004480 ORTHO05D005546 4.2e-166 588.6 459 70.2
Carub.0005s1764 Capsella rubella HOM05D004480 ORTHO05D005546 9.3e-166 587.4 472 67.6
HanXRQChr14g0458331 Helianthus annuus HOM05D004480 ORTHO05D005546 9.3e-166 587.4 476 67.2
HanXRQChr15g0465141 Helianthus annuus HOM05D004480 ORTHO05D005546 1.6e-165 586.6 476 66.0
BolC7t45142H Brassica oleracea HOM05D004480 ORTHO05D005546 3.5e-165 585.5 473 66.8
BcaNung00392 Brassica carinata HOM05D004480 ORTHO05D005546 4.6e-165 585.1 458 69.7
CARHR160850 Cardamine hirsuta HOM05D004480 ORTHO05D005546 6.0e-165 584.7 465 68.6
Os01g0888700 Oryza sativa ssp. japonica HOM05D004480 ORTHO05D005546 1.5e-163 580.1 493 64.9
Glyma.11G213400 Glycine max HOM05D004480 ORTHO05D005546 1.9e-163 579.7 383 76.8
FvH4_7g06440 Fragaria vesca HOM05D004480 ORTHO05D005546 3.3e-163 578.9 386 75.9
ATR0743G007 Amborella trichopoda HOM05D004480 ORTHO05D005546 1.3e-162 577.0 483 64.6
COL.COLO4_23990 Corchorus olitorius HOM05D004480 ORTHO05D005546 1.6e-162 576.6 459 68.6
Nitab4.5_0002686g0020 Nicotiana tabacum HOM05D004480 ORTHO05D005546 1.8e-161 573.2 484 63.8
arahy.Tifrunner.gnm1.ann1.JT43NG Arachis hypogaea HOM05D004480 ORTHO05D005546 2.4e-161 572.8 454 68.1
Thhalv10010355m.g Eutrema salsugineum HOM05D004480 ORTHO05D005546 3.4e-160 568.9 478 64.4
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 3.4e-160 568.9 410 71.7
Zm00001eb145320 Zea mays HOM05D004480 ORTHO05D005546 2.9e-159 565.8 485 64.9
ECA248G1292 Erigeron canadensis HOM05D004480 ORTHO05D005546 8.4e-159 564.3 467 65.1
Psat7g090480 Pisum sativum HOM05D004480 ORTHO05D005546 1.1e-158 563.9 391 73.7
Rhsim09G0001300 Rhododendron simsii HOM05D004480 ORTHO05D005546 1.4e-158 563.5 443 68.4
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 5.4e-158 561.6 449 67.7
PSO675G8718 Papaver somniferum HOM05D004480 ORTHO05D005546 1.2e-157 560.5 469 67.2
Zm00001eb365940 Zea mays HOM05D004480 ORTHO05D005546 1.2e-157 560.5 482 64.9
PSO732G0488 Papaver somniferum HOM05D004480 ORTHO05D005546 1.6e-157 560.1 472 66.9
HanXRQChr15g0464981 Helianthus annuus HOM05D004480 ORTHO05D005546 3.9e-156 555.4 331 80.7
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 5.1e-156 555.1 466 64.6
C08p26540 Brassica napus HOM05D004480 ORTHO05D005546 6.7e-156 554.7 465 63.9
Haze_11102 Corylus avellana HOM05D004480 ORTHO05D005546 1.1e-155 553.9 458 65.9
AT3G51270 Arabidopsis thaliana HOM05D004480 ORTHO05D005546 3.3e-155 552.4 465 65.8
BolC8t50268H Brassica oleracea HOM05D004480 ORTHO05D005546 7.4e-155 551.2 478 63.2
AUR62001702 Chenopodium quinoa HOM05D004480 ORTHO05D005546 4.8e-154 548.5 454 67.0
DCAR_011737 Daucus carota HOM05D004480 ORTHO05D005546 6.2e-154 548.1 522 59.4
Cpa.g.sc9.237 Carica papaya HOM05D004480 ORTHO05D005546 4.0e-153 545.4 455 66.2
CAN.G574.17 Capsicum annuum HOM05D004480 ORTHO05D005546 5.6e-147 525.0 438 65.5
BcaC09g50090 Brassica carinata HOM05D004480 ORTHO05D005546 3.7e-146 522.3 392 69.1
Lju124A7T24 Lonicera japonica HOM05D004480 ORTHO05D005546 1.8e-145 520.0 279 89.2
Oeu061379.1 Olea europaea HOM05D004480 ORTHO05D005546 2.4e-145 519.6 274 90.9
unitig_62.g23773 Utricularia gibba HOM05D004480 ORTHO05D005546 9.0e-145 517.7 504 60.1
Duzib177G0198 Durio zibethinus HOM05D004480 ORTHO05D005546 1.4e-142 510.4 416 66.8
Mapoly0052s0036 Marchantia polymorpha HOM05D004480 ORTHO05D005546 1.6e-141 506.9 460 58.9
Lsat_1_v5_gn_5_33821 Lactuca sativa HOM05D004480 ORTHO05D005546 2.1e-141 506.5 461 64.2
SMO203G0211 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 1.3e-138 497.3 332 73.5
Aqoxy2G00126 Aquilegia oxysepala HOM05D004480 ORTHO05D005546 8.2e-138 494.6 500 55.6
Pp3c20_22360 Physcomitrium patens HOM05D004480 ORTHO05D005546 1.1e-134 484.2 458 58.3
CDE02G2467 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.1e-131 474.2 477 55.3
AagrBONN_evm.TU.Sc2ySwM_228.3019 Anthoceros agrestis HOM05D004480 ORTHO05D005546 9.7e-131 471.1 328 69.5
CDE09G0719 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 2.8e-130 469.5 394 62.9
SHI53263 Sapria himalayana HOM05D004480 ORTHO05D005546 9.1e-129 464.5 336 70.5
ClCG00G001030 Citrullus lanatus HOM05D004480 ORTHO05D005546 4.5e-128 462.2 393 64.9
ClCG10G003270 Citrullus lanatus HOM05D004480 ORTHO05D005546 1.9e-126 456.8 560 51.1
CDE09G0674 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 2.6e-123 446.4 436 58.0
AUR62020079 Chenopodium quinoa HOM05D004480 ORTHO05D005546 2.6e-123 446.4 475 56.8
CBR_g22944 Chara braunii HOM05D004480 ORTHO05D005546 1.3e-122 444.1 282 74.1
CDE02G0168 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 3.2e-118 429.5 354 62.1
CDE09G1409 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.0e-116 424.5 429 56.4
SEGI_41177 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 4.1e-105 386.0 387 56.1
MCO09G317 Micromonas commoda HOM05D004480 ORTHO05D005546 5.9e-104 382.1 336 58.0
PRCOL_00001861 Prasinoderma coloniale HOM05D004480 ORTHO05D005546 1.1e-102 377.9 351 56.4
CDE09G0134 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 2.6e-99 366.7 286 64.7
Migut.O00494 Erythranthe guttata HOM05D004480 ORTHO05D005546 6.4e-82 308.9 452 48.0
Cre03.g159900 Chlamydomonas reinhardtii HOM05D004480 ORTHO05D005546 8.0e-77 292.0 259 57.9
Ciclev10020879m.g Citrus clementina HOM05D004480 ORTHO05D005546 1.7e-55 221.1 467 37.7
Cfa009489 Carpinus fangiana HOM05D004480 ORTHO05D005546 1.6e-53 214.5 385 37.1
SMO327G0006 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 5.6e-38 162.9 120 70.0
ClCG00G000020 Citrullus lanatus HOM05D004480 ORTHO05D005546 1.6e-37 161.4 408 33.1
HPP92_020625 Vanilla planifolia HOM05D004480 ORTHO05D005546 1.1e-36 158.7 242 44.6
SEGI_14248 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 2.1e-29 134.4 81 79.0
Zm00001eb233680 Zea mays HOM05D009386 ORTHO05D011419 9.3e-25 119.0 155 46.5
Oeu061378.1 Olea europaea HOM05D004480 ORTHO05D005546 1.5e-19 101.7 181 44.2
Zm00001eb011520 Zea mays HOM05D009386 ORTHO05D011419 1.7e-18 98.2 113 46.0
Lju124A7T25 Lonicera japonica HOM05D004480 ORTHO05D005546 3.8e-18 97.1 206 39.3
Zm00001eb393850 Zea mays HOM05D009386 ORTHO05D011419 6.5e-18 96.3 125 45.6
FAN07G0363 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.5e-17 94.4 158 41.1
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 7.2e-09 66.2 292 22.9
Medtr4g087670 Medicago truncatula HOM05D004480 ORTHO05D263555 7.4e-06 56.2 44 54.5


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