Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0007190 Simmondsia chinensis HOM05D004452 ORTHO05D005358 7.2e-265 916.8 488 100.0
Sc15g0006090 Simmondsia chinensis HOM05D004452 ORTHO05D005358 6.2e-184 647.9 483 71.8
GSVIVG01009484001 Vitis vinifera HOM05D004452 ORTHO05D005358 4.6e-171 605.1 446 70.9
TAR381G1434 Trochodendron aralioides HOM05D004452 ORTHO05D005358 1.9e-169 599.7 477 66.2
CSS0026728 Camellia sinensis var. sinensis HOM05D004452 ORTHO05D005358 7.4e-169 597.8 487 66.5
COL.COLO4_26520 Corchorus olitorius HOM05D004452 ORTHO05D005358 9.7e-169 597.4 480 66.5
AUR62041892 Chenopodium quinoa HOM05D004452 ORTHO05D005358 4.8e-168 595.1 458 70.7
Gohir.A05G203100 Gossypium hirsutum HOM05D004452 ORTHO05D005358 4.8e-168 595.1 471 66.9
Actinidia23285 Actinidia chinensis HOM05D004452 ORTHO05D005358 6.3e-168 594.7 471 67.7
Duzib093G1704 Durio zibethinus HOM05D004452 ORTHO05D005358 8.2e-168 594.3 470 66.0
Dinv35952 Davidia involucrata HOM05D004452 ORTHO05D005358 3.1e-167 592.4 460 70.0
TWI56G0235 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 3.1e-167 592.4 485 67.8
Manes.18G038000 Manihot esculenta HOM05D004452 ORTHO05D005358 5.3e-167 591.7 479 65.6
Dinv39307 Davidia involucrata HOM05D004452 ORTHO05D005358 9.0e-167 590.9 485 66.6
Rhsim06G0050800 Rhododendron simsii HOM05D004452 ORTHO05D005358 9.0e-167 590.9 498 65.1
EL10Ac1g01836 Beta vulgaris HOM05D004452 ORTHO05D005358 2.0e-166 589.7 486 67.3
Thecc.08G005800 Theobroma cacao HOM05D004452 ORTHO05D005358 4.5e-166 588.6 464 65.9
vmacro21515 Vaccinium macrocarpon HOM05D004452 ORTHO05D005358 5.0e-165 585.1 475 66.7
Lj4A59T44 Lonicera japonica HOM05D004452 ORTHO05D005358 6.5e-165 584.7 485 65.2
Ciclev10000290m.g Citrus clementina HOM05D004452 ORTHO05D005358 4.2e-164 582.0 464 65.7
Prupe.1G434400 Prunus persica HOM05D004452 ORTHO05D005358 4.2e-164 582.0 472 65.0
Cfa018088 Carpinus fangiana HOM05D004452 ORTHO05D005358 5.5e-164 581.6 479 63.5
Hund23866 Selenicereus undatus HOM05D004452 ORTHO05D005358 9.4e-164 580.9 489 66.3
TWI36G0852 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 1.2e-163 580.5 477 67.7
QL02p004676 Quercus lobata HOM05D004452 ORTHO05D005358 1.0e-162 577.4 461 66.6
CiPaw.15G055600 Carya illinoinensis HOM05D004452 ORTHO05D005358 2.3e-162 576.2 472 64.0
ClCG05G019920 Citrullus lanatus HOM05D004452 ORTHO05D005358 3.9e-162 575.5 474 65.4
Cc10_g04060 Coffea canephora HOM05D004452 ORTHO05D005358 6.7e-162 574.7 472 64.2
CsaV3_4G034360 Cucumis sativus L. HOM05D004452 ORTHO05D005358 1.5e-161 573.5 474 65.2
MELO3C016756.2 Cucumis melo HOM05D004452 ORTHO05D005358 2.0e-161 573.2 474 65.2
Nn5g30286 Nelumbo nucifera HOM05D004452 ORTHO05D005358 2.0e-161 573.2 474 64.6
Potri.014G028100 Populus trichocarpa HOM05D004452 ORTHO05D005358 4.3e-161 572.0 472 63.3
Gohir.D05G206300 Gossypium hirsutum HOM05D004452 ORTHO05D005358 9.7e-161 570.9 427 69.8
Gorai.009G212700 Gossypium raimondii HOM05D004452 ORTHO05D005358 9.7e-161 570.9 427 69.8
Atru.chr13.704 Acer truncatum HOM05D004452 ORTHO05D005358 6.3e-160 568.2 481 63.6
PGR031G1897 Punica granatum HOM05D004452 ORTHO05D005358 6.3e-160 568.2 458 66.4
PSO170G2588 Papaver somniferum HOM05D004452 ORTHO05D005358 1.8e-159 566.6 483 65.0
RcHm_v2.0_Chr6g0308041 Rosa chinensis HOM05D004452 ORTHO05D005358 1.8e-159 566.6 478 63.8
CANSAT11G1000 Cannabis sativa HOM05D004452 ORTHO05D005358 2.4e-159 566.2 474 65.6
MBI06_g02568_MAGBIO Magnolia biondii HOM05D004452 ORTHO05D005358 2.4e-159 566.2 459 64.5
FAN15G1326 Fragaria x ananassa HOM05D004452 ORTHO05D005358 4.1e-159 565.5 478 64.9
MD15G1081700 Malus domestica HOM05D004452 ORTHO05D005358 1.2e-158 563.9 458 64.2
THA.LOC104822853 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 1.5e-158 563.5 472 65.3
FAN27G2914 Fragaria x ananassa HOM05D004452 ORTHO05D005358 2.6e-158 562.8 478 64.9
Sabra14G0019200 Salix brachista HOM05D004452 ORTHO05D005358 3.4e-158 562.4 472 62.1
Nitab4.5_0002760g0030 Nicotiana tabacum HOM05D004452 ORTHO05D005358 4.5e-158 562.0 473 66.2
FvH4_2g34320 Fragaria vesca HOM05D004452 ORTHO05D005358 1.0e-157 560.8 478 64.2
Nitab4.5_0000287g0200 Nicotiana tabacum HOM05D004452 ORTHO05D005358 1.3e-157 560.5 473 66.6
Sed0009272 Sechium edule HOM05D004452 ORTHO05D005358 2.2e-157 559.7 474 63.3
FAN20G1510 Fragaria x ananassa HOM05D004452 ORTHO05D005358 3.8e-157 558.9 478 64.9
Eucgr.F02336 Eucalyptus grandis HOM05D004452 ORTHO05D005358 6.5e-157 558.1 458 66.2
PSO210G0441 Papaver somniferum HOM05D004452 ORTHO05D005358 6.5e-157 558.1 483 64.2
PGSC0003DMG400007967 Solanum tuberosum HOM05D004452 ORTHO05D005358 1.1e-156 557.4 473 65.8
Lalb_Chr11g0062611 Lupinus albus HOM05D004452 ORTHO05D005358 1.9e-156 556.6 482 61.4
Glyma.06G040600 Glycine max HOM05D004452 ORTHO05D005358 3.2e-156 555.8 473 61.7
DCAR_019448 Daucus carota HOM05D004452 ORTHO05D005358 4.2e-156 555.4 473 64.7
arahy.Tifrunner.gnm1.ann1.UAD7VL Arachis hypogaea HOM05D004452 ORTHO05D005358 7.2e-156 554.7 464 65.1
Glyma.04G039400 Glycine max HOM05D004452 ORTHO05D005358 1.2e-155 553.9 473 61.9
CAN.G1030.10 Capsicum annuum HOM05D004452 ORTHO05D005358 1.6e-155 553.5 473 64.7
Oeu043579.4 Olea europaea HOM05D004452 ORTHO05D005358 2.1e-155 553.1 456 62.7
Cpa.g.sc49.27 Carica papaya HOM05D004452 ORTHO05D005358 2.7e-155 552.7 474 62.0
Solyc04g078830.3 Solanum lycopersicum HOM05D004452 ORTHO05D005358 6.1e-155 551.6 473 65.1
arahy.Tifrunner.gnm1.ann1.Y5ZCTQ Arachis hypogaea HOM05D004452 ORTHO05D005358 3.0e-154 549.3 464 64.7
Phvul.009G065600 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 2.6e-153 546.2 473 63.0
Aqoxy5G01224 Aquilegia oxysepala HOM05D004452 ORTHO05D005358 5.7e-153 545.0 473 60.5
CiPaw.16G042900 Carya illinoinensis HOM05D004452 ORTHO05D005358 1.7e-152 543.5 456 62.5
Migut.N02714 Erythranthe guttata HOM05D004452 ORTHO05D005358 1.7e-152 543.5 456 64.7
Lsat_1_v5_gn_1_21181 Lactuca sativa HOM05D004452 ORTHO05D005358 3.7e-152 542.3 490 59.6
TPR.G24198 Trifolium pratense HOM05D004452 ORTHO05D005358 1.4e-151 540.4 455 62.4
FAN24G0195 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.8e-151 540.0 527 58.4
MSTRG.24335 Avicennia marina HOM05D004452 ORTHO05D005358 5.3e-151 538.5 476 63.4
CDE08G0013 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 7.0e-151 538.1 474 59.3
HanXRQChr02g0039511 Helianthus annuus HOM05D004452 ORTHO05D005358 2.6e-150 536.2 488 61.9
Ca_15944_v3 Cicer arietinum L. HOM05D004452 ORTHO05D005358 3.5e-150 535.8 480 59.8
Peaxi162Scf00252g00221 Petunia axillaris HOM05D004452 ORTHO05D005358 4.5e-150 535.4 471 63.3
SGA_v2.0_scaffold28G11777 Striga asiatica HOM05D004452 ORTHO05D005358 7.7e-150 534.6 456 62.5
Psat5g042600 Pisum sativum HOM05D004452 ORTHO05D005358 1.0e-149 534.3 456 60.7
VMungo1309G1308 Vigna mungo HOM05D004452 ORTHO05D005358 1.0e-149 534.3 473 61.9
Lj1g0004160 Lotus japonicus HOM05D004452 ORTHO05D005358 2.5e-148 529.6 477 59.5
Medtr3g101790 Medicago truncatula HOM05D004452 ORTHO05D005358 4.2e-148 528.9 483 58.2
CANSAT11G0118 Cannabis sativa HOM05D004452 ORTHO05D005358 1.0e-146 524.2 468 60.7
ECA247G0253 Erigeron canadensis HOM05D004452 ORTHO05D005358 1.0e-146 524.2 493 60.4
ATR1126G044 Amborella trichopoda HOM05D004452 ORTHO05D005358 8.8e-146 521.2 464 59.9
BcaC06g31738 Brassica carinata HOM05D004452 ORTHO05D005358 5.7e-145 518.5 478 61.3
Lalb_Chr08g0245391 Lupinus albus HOM05D004452 ORTHO05D005358 2.8e-144 516.2 493 60.0
BcaC02g10792 Brassica carinata HOM05D004452 ORTHO05D005358 8.2e-144 514.6 477 62.5
C04p25060 Brassica napus HOM05D004452 ORTHO05D005358 8.2e-144 514.6 477 62.5
BolC4t24007H Brassica oleracea HOM05D004452 ORTHO05D005358 8.2e-144 514.6 477 62.5
AL8G17930 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 1.8e-143 513.5 465 60.9
CARHR181170 Cardamine hirsuta HOM05D004452 ORTHO05D005358 1.8e-143 513.5 465 62.6
BraA06t27686Z Brassica rapa HOM05D004452 ORTHO05D005358 9.1e-143 511.1 472 60.8
AT5G42920 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 1.6e-142 510.4 464 60.8
A06p48170 Brassica napus HOM05D004452 ORTHO05D005358 2.0e-142 510.0 472 60.4
Carub.0008s0587 Capsella rubella HOM05D004452 ORTHO05D005358 3.5e-142 509.2 479 60.1
Aa31LG9G12980 Aethionema arabicum HOM05D004452 ORTHO05D005358 1.3e-141 507.3 466 60.9
Oeu023860.1 Olea europaea HOM05D004452 ORTHO05D005358 1.3e-141 507.3 472 58.7
Thhalv10003147m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 6.5e-141 505.0 474 60.3
Hma1.2p1_2046F.1_g312410 Hydrangea macrophylla HOM05D004452 ORTHO05D005358 1.9e-140 503.4 502 57.2
Sp2g07660 Schrenkiella parvula HOM05D004452 ORTHO05D005358 4.2e-140 502.3 465 60.9
SHI08268 Sapria himalayana HOM05D004452 ORTHO05D005358 1.0e-138 497.7 470 58.3
Phvul.001G022500 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 4.0e-138 495.7 468 56.8
Glyma.14G083300 Glycine max HOM05D004452 ORTHO05D005358 5.2e-138 495.4 468 57.1
Glyma.17G241800 Glycine max HOM05D004452 ORTHO05D005358 2.0e-137 493.4 468 56.6
CDE04G2017 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 6.3e-136 488.4 414 61.8
VMungo0647G1811 Vigna mungo HOM05D004452 ORTHO05D005358 1.0e-133 481.1 466 56.4
arahy.Tifrunner.gnm1.ann1.IXK305 Arachis hypogaea HOM05D004452 ORTHO05D005358 2.9e-133 479.6 486 54.9
arahy.Tifrunner.gnm1.ann1.VB8FSW Arachis hypogaea HOM05D004452 ORTHO05D005358 2.9e-133 479.6 486 54.9
THA.LOC104812571 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 8.5e-133 478.0 481 57.4
Carub.0001s3568 Capsella rubella HOM05D004452 ORTHO05D005358 3.2e-132 476.1 460 55.9
AL1G52910 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 9.5e-132 474.6 471 55.2
Sp1g34090 Schrenkiella parvula HOM05D004452 ORTHO05D005358 4.7e-131 472.2 452 56.0
AT1G45233 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 8.8e-130 468.0 471 54.1
Thhalv10011479m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 2.6e-129 466.5 452 56.6
Os02g0767100 Oryza sativa ssp. japonica HOM05D004452 ORTHO05D005358 8.3e-128 461.5 486 53.9
Zm00001eb255990 Zea mays HOM05D004452 ORTHO05D005358 1.1e-127 461.1 489 56.6
MSTRG.25087 Avicennia marina HOM05D004452 ORTHO05D005358 5.9e-126 455.3 417 58.0
CARHR036370 Cardamine hirsuta HOM05D004452 ORTHO05D005358 1.7e-125 453.8 464 54.5
Sed0026470 Sechium edule HOM05D004452 ORTHO05D005358 3.3e-124 449.5 471 54.8
Mapoly0012s0112 Marchantia polymorpha HOM05D004452 ORTHO05D005358 2.8e-123 446.4 463 55.5
BraA10t42942Z Brassica rapa HOM05D004452 ORTHO05D005358 9.2e-119 431.4 452 52.4
A10p06900 Brassica napus HOM05D004452 ORTHO05D005358 4.6e-118 429.1 448 52.2
Aa31sc108G100 Aethionema arabicum HOM05D004452 ORTHO05D005358 1.3e-117 427.6 481 52.0
BolC6t35279H Brassica oleracea HOM05D004452 ORTHO05D005358 1.7e-112 410.6 465 50.1
BcaC08g42910 Brassica carinata HOM05D004452 ORTHO05D005358 1.1e-111 407.9 465 49.5
C06p01470 Brassica napus HOM05D004452 ORTHO05D005358 1.9e-111 407.1 465 49.5
unitig_26.g10021 Utricularia gibba HOM05D002518 ORTHO05D002630 1.7e-109 400.6 475 51.8
BcaB07g33871 Brassica carinata HOM05D004452 ORTHO05D005358 3.4e-105 386.3 454 49.1
SalBow8G0374 Salvia bowleyana HOM05D004452 ORTHO05D005358 1.2e-102 377.9 315 64.4
SalBow8G3632 Salvia bowleyana HOM05D004452 ORTHO05D005358 1.2e-102 377.9 315 64.4
AagrBONN_evm.TU.Sc2ySwM_228.4151 Anthoceros agrestis HOM05D004452 ORTHO05D005358 1.2e-99 367.9 457 46.6
Nn7g37344 Nelumbo nucifera HOM05D004452 ORTHO05D005358 1.1e-98 364.8 296 66.2
SMO356G0003 Selaginella moellendorffii HOM05D004452 ORTHO05D005358 9.9e-97 358.2 378 55.8
unitig_749.g13678 Utricularia gibba HOM05D004452 ORTHO05D005358 1.7e-96 357.5 441 48.1
Pp3c7_25670 Physcomitrium patens HOM05D004452 ORTHO05D005358 7.8e-94 348.6 470 44.0
SEGI_30975 Sequoiadendron giganteum HOM05D004452 ORTHO05D005358 1.7e-88 330.9 311 57.6
AagrBONN_evm.TU.Sc2ySwM_117.2784 Anthoceros agrestis HOM05D004452 ORTHO05D005358 1.3e-83 314.7 453 42.2
TAR625G1031 Trochodendron aralioides HOM05D004452 ORTHO05D005358 2.6e-73 280.4 274 59.1
Sopen04g032430 Solanum pennellii HOM05D004452 ORTHO05D005358 2.2e-72 277.3 233 65.2
AUR62038817 Chenopodium quinoa HOM05D004452 ORTHO05D005358 1.8e-69 267.7 171 74.3
HPP92_016717 Vanilla planifolia HOM05D004452 ORTHO05D005358 5.6e-68 262.7 408 40.0
Potri.002G125300 Populus trichocarpa HOM05D004452 ORTHO05D005358 2.1e-67 260.8 318 48.7
Nn3g17073 Nelumbo nucifera HOM05D004452 ORTHO05D005358 6.0e-62 242.7 220 61.8
MD08G1099200 Malus domestica HOM05D004452 ORTHO05D005358 1.1e-60 238.4 197 66.0
CBR_g24409 Chara braunii HOM05D004452 ORTHO05D005358 1.0e-56 225.3 405 36.5
MCO13G423 Micromonas commoda HOM05D004452 ORTHO05D005358 5.9e-49 199.5 453 33.3
Cre17.g705550 Chlamydomonas reinhardtii HOM05D004452 ORTHO05D005358 4.4e-44 183.3 455 31.6
MD08G1099300 Malus domestica HOM05D004452 ORTHO05D005358 1.2e-41 175.3 146 57.5
SalBow8G2832 Salvia bowleyana HOM05D004452 ORTHO05D005358 1.2e-41 175.3 163 63.2
SalBow8G5418 Salvia bowleyana HOM05D004452 ORTHO05D005358 1.2e-41 175.3 163 63.2
Aa31LG7G10550 Aethionema arabicum HOM05D004452 ORTHO05D005358 2.8e-27 127.5 88 65.9
Aa31LG7G10540 Aethionema arabicum HOM05D004452 ORTHO05D005358 2.5e-15 87.8 90 57.8
CARHR174670 Cardamine hirsuta HOM05D004452 ORTHO05D005358 1.8e-10 71.6 54 61.1
PRCOL_00004305 Prasinoderma coloniale HOM05D004452 ORTHO05D005358 2.0e-09 68.2 187 30.5


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