Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 7.0e-218 760.4 398 100.0
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 2.0e-204 715.7 398 92.7
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 2.9e-203 711.8 398 93.0
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 2.4e-202 708.8 398 93.0
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 1.6e-201 706.1 398 92.0
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 4.6e-201 704.5 398 91.7
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.0e-200 703.4 398 91.7
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 1.7e-200 702.6 397 91.7
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 3.0e-200 701.8 398 91.5
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 3.0e-200 701.8 398 91.5
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 3.9e-200 701.4 398 91.2
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 1.1e-199 699.9 398 91.7
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 1.1e-199 699.9 398 91.0
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 1.1e-199 699.9 398 91.5
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 1.5e-199 699.5 398 90.2
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 1.5e-199 699.5 398 90.2
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 1.9e-199 699.1 398 91.2
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 1.9e-199 699.1 398 91.2
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.9e-199 699.1 398 91.0
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 3.3e-199 698.4 398 91.2
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 2.1e-198 695.7 398 90.7
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 3.6e-198 694.9 398 90.2
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 3.6e-198 694.9 398 90.5
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 4.7e-198 694.5 398 91.0
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 4.7e-198 694.5 398 90.5
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 4.7e-198 694.5 398 89.7
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 4.7e-198 694.5 398 89.7
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 6.2e-198 694.1 398 90.7
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.1e-197 693.3 398 90.5
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.1e-197 693.3 398 90.5
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 1.4e-197 693.0 398 90.2
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 1.4e-197 693.0 398 89.4
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 1.8e-197 692.6 398 89.2
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 8.9e-197 690.3 398 89.9
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 1.2e-196 689.9 398 88.9
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.5e-196 689.5 398 90.2
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 2.0e-196 689.1 398 90.2
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 2.6e-196 688.7 398 89.9
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 2.6e-196 688.7 401 89.8
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 2.6e-196 688.7 398 88.7
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 4.4e-196 688.0 398 88.9
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 4.4e-196 688.0 399 90.2
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 5.8e-196 687.6 398 89.7
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 1.3e-195 686.4 398 88.2
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 3.8e-195 684.9 398 89.4
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 3.8e-195 684.9 398 88.4
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 8.4e-195 683.7 398 89.2
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 8.4e-195 683.7 399 89.0
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 1.1e-194 683.3 398 89.2
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.4e-194 682.9 398 88.4
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 1.4e-194 682.9 398 88.2
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 1.9e-194 682.6 398 88.9
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 2.4e-194 682.2 403 88.8
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 4.2e-194 681.4 398 88.2
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 4.2e-194 681.4 398 88.7
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 9.2e-194 680.2 398 87.9
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 1.2e-193 679.9 398 88.2
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 1.6e-193 679.5 398 88.7
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 6.0e-193 677.6 398 87.4
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 1.3e-192 676.4 399 88.5
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.3e-192 676.4 399 88.5
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 1.3e-192 676.4 398 87.2
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 3.9e-192 674.9 399 88.2
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 5.1e-192 674.5 398 88.2
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 1.1e-191 673.3 398 87.9
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 1.9e-191 672.5 398 88.2
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 3.3e-191 671.8 398 86.4
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 5.6e-191 671.0 398 87.7
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 5.6e-191 671.0 398 86.7
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 4.7e-190 667.9 399 87.2
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 1.2e-188 663.3 398 85.7
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 1.5e-188 662.9 398 86.2
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 5.8e-188 661.0 406 84.2
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 5.8e-188 661.0 398 85.7
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 7.6e-188 660.6 398 85.7
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 7.6e-188 660.6 400 85.0
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 2.9e-187 658.7 398 84.9
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 4.9e-187 657.9 398 85.4
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 6.4e-187 657.5 398 87.4
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 1.4e-186 656.4 398 86.2
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 1.4e-186 656.4 398 85.2
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 1.4e-186 656.4 398 85.2
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 1.9e-186 656.0 398 84.9
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 7.1e-186 654.1 398 85.2
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 7.1e-186 654.1 398 85.2
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 7.1e-186 654.1 398 85.2
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 1.2e-185 653.3 398 84.9
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 2.1e-185 652.5 398 84.4
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 3.5e-185 651.7 398 84.9
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 3.5e-185 651.7 398 84.9
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 1.0e-184 650.2 398 84.7
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 1.0e-184 650.2 398 84.7
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 1.0e-184 650.2 398 84.7
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 3.0e-184 648.7 501 72.3
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 6.6e-184 647.5 402 84.1
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 1.5e-183 646.4 440 78.2
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 3.3e-183 645.2 490 73.5
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 3.6e-182 641.7 477 73.8
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 1.4e-181 639.8 392 85.2
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 4.0e-181 638.3 398 84.4
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 7.6e-180 634.0 398 83.4
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 1.7e-179 632.9 437 79.2
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 5.4e-178 627.9 398 82.9
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 9.3e-178 627.1 418 80.9
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 3.5e-177 625.2 355 91.0
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.8e-176 622.9 439 78.4
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 5.6e-175 617.8 398 80.4
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 1.6e-174 616.3 354 91.2
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 2.1e-174 615.9 398 79.9
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 8.1e-174 614.0 368 87.5
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 4.5e-172 608.2 431 77.3
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 7.6e-172 607.4 398 77.4
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 1.9e-170 602.8 354 88.4
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 1.9e-167 592.8 387 81.9
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 1.6e-166 589.7 398 75.6
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 4.0e-165 585.1 397 73.8
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 7.6e-164 580.9 398 73.4
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 1.2e-153 547.0 398 75.6
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 3.7e-150 535.4 398 74.1
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 1.8e-149 533.1 396 69.2
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 2.8e-142 509.2 347 77.2
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 6.5e-139 498.0 423 67.1
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 3.3e-135 485.7 271 92.3
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 1.1e-125 454.1 312 76.9
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 1.4e-112 410.6 395 54.9
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 9.8e-111 404.4 229 91.7
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 6.6e-107 391.7 401 52.6
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 4.9e-102 375.6 219 90.0
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 1.9e-90 337.0 401 48.4
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 6.8e-88 328.6 214 79.4
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 3.5e-84 316.2 214 77.6
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 5.6e-66 255.8 150 90.0
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.8e-64 250.8 150 88.0
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.1e-58 231.5 319 42.6
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 1.1e-53 214.9 183 66.7
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 1.3e-49 201.4 146 70.5
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 2.0e-39 167.5 203 44.3
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 1.7e-38 164.5 243 47.3
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 6.7e-35 152.5 94 83.0
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 6.7e-35 152.5 94 83.0
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 6.5e-14 82.8 49 73.5
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 1.5e-13 81.6 77 62.3
arahy.Tifrunner.gnm1.ann1.2K5AT5 Arachis hypogaea HOM05D005164 ORTHO05D006398 4.8e-09 66.6 53 66.0
ECA240G1489 Erigeron canadensis HOM05D001185 ORTHO05D003777 9.1e-08 62.4 331 23.9
CsaV3_2G017820 Cucumis sativus L. HOM05D001185 ORTHO05D003777 3.8e-06 57.0 404 22.5


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