Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 3.0e-199 698.4 359 100.0
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.8e-141 505.8 299 82.6
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.1e-140 503.8 299 81.9
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 5.0e-138 495.0 298 81.5
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 1.0e-135 487.3 298 79.9
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.5e-134 483.4 298 78.2
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 2.6e-131 472.6 298 76.2
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 4.5e-131 471.9 298 75.8
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 7.7e-131 471.1 296 77.4
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.0e-130 470.7 308 74.0
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.0e-130 470.7 300 76.0
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.8e-130 468.8 308 74.0
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 2.5e-129 466.1 298 74.5
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 4.2e-129 465.3 298 76.8
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 4.2e-129 465.3 329 70.8
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 4.2e-129 465.3 297 74.7
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 5.5e-129 464.9 298 76.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 3.6e-128 462.2 290 76.2
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 4.7e-128 461.8 298 74.8
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 6.1e-128 461.5 287 77.0
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 6.1e-128 461.5 294 75.2
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 6.1e-128 461.5 298 74.5
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 8.0e-128 461.1 301 73.4
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.8e-127 459.9 352 67.9
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 2.3e-127 459.5 298 74.5
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 3.9e-127 458.8 292 74.3
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 5.2e-127 458.4 298 74.5
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 6.7e-127 458.0 307 72.6
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 8.8e-127 457.6 287 76.7
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 1.1e-126 457.2 297 72.7
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.5e-126 456.8 287 76.0
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 2.0e-126 456.4 298 74.2
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 3.3e-126 455.7 308 72.7
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 3.3e-126 455.7 298 73.8
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 7.4e-126 454.5 289 75.4
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 7.4e-126 454.5 298 73.8
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 7.4e-126 454.5 290 75.2
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 9.7e-126 454.1 301 76.7
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 9.7e-126 454.1 290 75.2
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.3e-125 453.8 298 73.2
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 2.2e-125 453.0 298 71.8
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.7e-125 452.2 298 73.5
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 4.8e-125 451.8 298 74.2
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 4.8e-125 451.8 300 73.0
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 6.3e-125 451.4 289 75.4
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 6.3e-125 451.4 290 75.2
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 8.2e-125 451.1 298 71.5
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.8e-124 449.9 289 75.1
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.8e-124 449.9 297 71.4
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.8e-124 449.9 302 73.8
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.8e-124 449.9 302 73.8
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.4e-124 449.5 290 74.5
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 2.4e-124 449.5 302 73.8
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 3.1e-124 449.1 298 73.5
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 3.1e-124 449.1 298 73.5
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 5.3e-124 448.4 298 73.5
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.0e-124 448.0 302 73.5
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 9.1e-124 447.6 296 73.0
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.2e-123 447.2 304 73.4
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 1.2e-123 447.2 298 73.5
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 1.2e-123 447.2 298 73.5
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.6e-123 446.8 287 74.9
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 1.6e-123 446.8 325 69.5
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 4.5e-123 445.3 281 74.4
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 5.9e-123 444.9 293 71.7
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 5.9e-123 444.9 301 71.8
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 5.9e-123 444.9 298 71.1
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 7.7e-123 444.5 298 71.5
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.3e-122 443.7 293 72.7
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.3e-122 443.7 290 73.1
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.2e-122 443.0 295 73.9
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 2.9e-122 442.6 297 72.1
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.9e-122 442.6 291 73.9
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 3.8e-122 442.2 291 73.5
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.5e-121 439.5 298 71.5
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 5.5e-121 438.3 290 72.1
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 2.1e-120 436.4 298 70.5
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 4.7e-120 435.3 325 68.6
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 6.1e-120 434.9 289 70.9
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 8.0e-120 434.5 296 69.6
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.8e-119 433.3 301 70.4
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 5.2e-119 431.8 301 70.4
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 8.8e-119 431.0 296 70.3
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.0e-118 429.9 296 70.3
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 2.8e-117 426.0 289 68.9
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 2.8e-117 426.0 289 68.9
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.8e-117 426.0 296 69.9
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 2.8e-117 426.0 288 69.8
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 3.7e-117 425.6 290 71.0
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.8e-117 425.2 296 69.9
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 3.1e-116 422.5 317 66.2
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 7.0e-116 421.4 292 70.2
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 2.0e-115 419.9 416 55.8
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 4.5e-115 418.7 303 68.6
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 4.5e-115 418.7 300 69.3
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 6.5e-114 414.8 283 71.4
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 4.2e-113 412.1 287 70.0
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 8.0e-112 407.9 293 66.2
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 7.0e-108 394.8 302 67.5
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 5.0e-106 388.7 263 71.9
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 2.5e-105 386.3 295 61.4
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 6.1e-104 381.7 291 63.2
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 8.0e-104 381.3 284 65.5
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 8.0e-104 381.3 301 61.5
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 6.8e-103 378.3 292 63.4
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 2.1e-96 356.7 288 58.0
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.4e-95 354.0 288 57.6
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.3e-95 353.2 320 55.3
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 7.8e-91 338.2 224 72.3
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.5e-89 334.0 203 78.3
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.2e-88 330.9 289 54.0
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 4.7e-88 328.9 196 81.1
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 3.1e-87 326.2 298 57.0
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.7e-85 320.5 301 58.1
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 4.6e-83 312.4 220 70.9
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 7.8e-83 311.6 298 55.7
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 1.1e-76 291.2 300 55.3
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 2.8e-72 276.6 235 57.0
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 3.3e-65 253.1 160 76.2
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 2.4e-63 246.9 325 42.2
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.4e-30 136.7 103 66.0
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 6.5e-29 132.5 98 64.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 1.1e-28 131.7 99 65.7
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 7.7e-22 109.0 88 63.6
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.4e-15 87.4 50 82.0
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 8.8e-10 68.9 91 46.2


User provided reference genes

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