Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.9e-60 235.7 126 100.0
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.9e-60 235.7 126 100.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 4.3e-44 181.4 118 84.7
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 2.7e-38 162.2 118 72.9
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.3e-37 159.8 103 83.5
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.5e-36 156.4 99 85.9
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.3e-36 154.8 118 73.7
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 1.6e-35 152.9 118 71.2
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 2.8e-35 152.1 100 83.0
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 4.7e-35 151.4 98 81.6
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 6.2e-35 151.0 118 70.3
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 1.1e-34 150.2 116 72.4
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 1.4e-34 149.8 118 69.5
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 5.2e-34 147.9 119 69.7
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 8.9e-34 147.1 119 69.7
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 8.9e-34 147.1 119 69.7
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 2.6e-33 145.6 118 68.6
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 2.6e-33 145.6 118 68.6
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.8e-33 144.4 99 81.8
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 3.7e-32 141.7 119 69.7
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 1.1e-31 140.2 120 67.5
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 4.1e-31 138.3 118 68.6
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 5.4e-31 137.9 100 76.0
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 5.4e-31 137.9 119 67.2
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 7.1e-31 137.5 95 82.1
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 7.1e-31 137.5 119 64.7
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 9.2e-31 137.1 119 67.2
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 2.1e-30 136.0 119 68.1
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 3.5e-30 135.2 120 66.7
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 6.0e-30 134.4 119 67.2
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 6.0e-30 134.4 119 67.2
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 7.8e-30 134.0 119 67.2
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 1.7e-29 132.9 120 65.8
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 2.3e-29 132.5 119 65.5
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 3.0e-29 132.1 120 66.7
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 5.1e-29 131.3 119 63.9
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 5.1e-29 131.3 118 64.4
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 8.6e-29 130.6 119 66.4
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-28 130.2 119 65.5
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-28 130.2 119 65.5
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.9e-28 129.4 119 64.7
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 2.5e-28 129.0 100 76.0
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.5e-28 129.0 119 63.9
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.3e-28 128.6 119 65.5
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 4.3e-28 128.3 120 65.0
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 4.3e-28 128.3 122 64.8
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 5.6e-28 127.9 119 63.9
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 5.6e-28 127.9 120 65.0
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 9.6e-28 127.1 119 63.9
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 1.2e-27 126.7 107 68.2
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 1.6e-27 126.3 120 63.3
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 1.6e-27 126.3 119 63.9
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.8e-27 125.6 120 63.3
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.8e-27 125.6 120 66.7
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 2.8e-27 125.6 100 70.0
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.8e-27 125.6 120 65.0
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 3.6e-27 125.2 121 65.3
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 3.6e-27 125.2 119 63.9
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 4.7e-27 124.8 120 65.0
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 6.2e-27 124.4 119 63.0
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 6.2e-27 124.4 119 62.2
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 6.2e-27 124.4 119 62.2
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 8.1e-27 124.0 121 62.8
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 8.1e-27 124.0 120 62.5
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 8.1e-27 124.0 120 62.5
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 1.1e-26 123.6 119 63.0
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.1e-26 123.6 119 63.0
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.1e-26 123.6 119 63.0
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.1e-26 123.6 119 63.0
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.4e-26 123.2 122 61.5
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 1.4e-26 123.2 120 62.5
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.4e-26 123.2 100 74.0
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 1.4e-26 123.2 100 73.0
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 2.4e-26 122.5 118 63.6
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 3.1e-26 122.1 121 62.8
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 3.1e-26 122.1 119 63.9
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 4.0e-26 121.7 118 63.6
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 4.0e-26 121.7 119 62.2
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 4.0e-26 121.7 120 62.5
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 4.0e-26 121.7 119 62.2
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 5.2e-26 121.3 119 62.2
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 5.2e-26 121.3 120 60.8
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 8.9e-26 120.6 119 60.5
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.2e-25 120.2 107 65.4
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.2e-25 120.2 81 82.7
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.5e-25 119.8 120 61.7
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 1.5e-25 119.8 120 61.7
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.5e-25 119.8 120 61.7
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 2.0e-25 119.4 109 65.1
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 2.0e-25 119.4 120 61.7
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 2.0e-25 119.4 119 63.0
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.0e-25 119.4 107 64.5
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.4e-25 118.6 121 61.2
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 7.6e-25 117.5 140 55.7
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 7.6e-25 117.5 94 74.5
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 7.6e-25 117.5 120 60.0
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 1.3e-24 116.7 122 63.1
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 1.7e-24 116.3 117 61.5
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 2.2e-24 115.9 108 65.7
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.2e-24 115.9 120 60.0
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 2.2e-24 115.9 120 60.0
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 2.2e-24 115.9 118 60.2
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.9e-24 115.5 100 67.0
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.8e-24 115.2 120 60.8
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 4.9e-24 114.8 120 60.0
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 8.4e-24 114.0 120 59.2
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 8.4e-24 114.0 120 59.2
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 8.4e-24 114.0 120 59.2
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 8.4e-24 114.0 120 59.2
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 8.4e-24 114.0 120 59.2
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 8.4e-24 114.0 121 61.2
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 1.4e-23 113.2 120 59.2
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.4e-23 113.2 120 59.2
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 1.4e-23 113.2 123 61.0
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.4e-23 113.2 108 63.9
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.4e-23 113.2 120 60.0
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.4e-23 113.2 121 61.2
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.9e-23 112.8 123 61.8
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 1.9e-23 112.8 119 58.8
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.4e-23 112.5 120 59.2
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 2.4e-23 112.5 123 61.0
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 2.4e-23 112.5 120 59.2
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 3.2e-23 112.1 123 61.0
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 3.2e-23 112.1 119 59.7
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 3.2e-23 112.1 108 61.1
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 4.2e-23 111.7 120 58.3
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.2e-23 111.7 121 60.3
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 4.2e-23 111.7 123 61.0
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 7.1e-23 110.9 120 58.3
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 7.1e-23 110.9 121 58.7
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 7.1e-23 110.9 122 58.2
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 7.1e-23 110.9 119 57.1
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 9.3e-23 110.5 123 59.3
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 9.3e-23 110.5 122 55.7
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 1.2e-22 110.2 108 62.0
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 2.1e-22 109.4 120 57.5
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.1e-22 109.4 119 59.7
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.1e-22 109.4 122 54.9
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 2.7e-22 109.0 120 57.5
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 2.7e-22 109.0 123 60.2
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 4.6e-22 108.2 107 59.8
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 7.8e-22 107.5 101 62.4
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.7e-21 106.3 109 62.4
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.7e-21 106.3 119 58.0
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 2.3e-21 105.9 119 58.0
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 5.1e-21 104.8 119 58.0
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 5.1e-21 104.8 119 58.0
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 5.1e-21 104.8 119 58.0
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 5.1e-21 104.8 119 58.0
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 2.5e-20 102.4 119 57.1
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 2.5e-20 102.4 123 55.3
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 7.3e-20 100.9 124 54.8
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.1e-19 99.4 119 55.5
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 2.8e-19 99.0 120 54.2
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 6.9e-18 94.4 119 55.5
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 9.0e-18 94.0 81 67.9
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.2e-17 93.6 129 51.2
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 4.4e-17 91.7 76 71.1
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 4.4e-17 91.7 77 70.1
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.4e-17 91.7 88 62.5
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 7.6e-17 90.9 77 66.2
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 1.7e-16 89.7 79 68.4
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 2.2e-16 89.4 83 66.3
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.8e-16 88.6 105 56.2
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 1.4e-15 86.7 77 67.5
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 2.4e-15 85.9 104 58.7
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.4e-15 85.9 72 61.1
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 2.7e-14 82.4 46 84.8
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 2.7e-14 82.4 107 54.2
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 3.5e-14 82.0 123 48.0
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 1.7e-13 79.7 90 57.8
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 3.3e-12 75.5 107 53.3
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 7.4e-12 74.3 42 83.3
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 9.0e-10 67.4 45 77.8
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 2.6e-09 65.9 55 60.0
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 4.5e-09 65.1 118 43.2
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 9.9e-09 63.9 118 43.2
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 2.2e-08 62.8 118 41.5
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 9.3e-07 57.4 78 47.4
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 6.0e-06 54.7 41 65.9


User provided reference genes

Program Settings