Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.1e-216 754.2 400 100.0
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.1e-216 754.2 400 100.0
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.3e-166 590.1 330 97.0
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.3e-157 558.1 330 92.4
SalBow1G5399 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.8e-79 298.9 166 95.2
SalBow1G8419 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.5e-77 292.4 245 72.2
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 1.6e-65 254.2 332 51.5
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 7.4e-58 228.8 323 50.8
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 1.3e-57 228.0 323 50.8
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 5.9e-55 219.2 291 50.9
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 1.3e-54 218.0 327 48.6
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 9.4e-53 211.8 260 54.2
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 1.6e-52 211.1 256 54.7
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 4.6e-52 209.5 253 53.8
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 2.3e-51 207.2 326 47.5
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 4.4e-50 203.0 282 51.1
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 5.7e-50 202.6 285 50.2
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 1.3e-49 201.4 255 52.9
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 1.1e-48 198.4 309 47.9
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 9.1e-48 195.3 255 51.4
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 4.5e-47 193.0 311 46.9
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 4.5e-47 193.0 275 49.8
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 2.9e-46 190.3 298 48.7
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 5.0e-46 189.5 267 50.6
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 6.5e-46 189.1 247 52.2
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 8.5e-46 188.7 285 47.0
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 1.9e-45 187.6 255 51.0
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 3.2e-45 186.8 216 54.2
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 9.4e-45 185.3 255 50.2
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 9.4e-45 185.3 255 50.2
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 9.4e-45 185.3 255 50.2
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 9.4e-45 185.3 255 50.2
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 7.9e-44 182.2 344 39.5
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 5.2e-43 179.5 230 53.9
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 8.8e-43 178.7 340 40.3
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 1.7e-41 174.5 255 49.4
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 2.8e-41 173.7 285 44.6
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 3.7e-41 173.3 255 48.6
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 8.2e-41 172.2 278 44.2
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 1.1e-40 171.8 251 49.0
SalBow1G7440 Salvia bowleyana HOM05D003467 ORTHO05D004220 2.4e-40 170.6 97 97.9
SalBow1G8430 Salvia bowleyana HOM05D003467 ORTHO05D004220 2.4e-40 170.6 97 97.9
SalBow8G0101 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.3e-40 169.5 97 96.9
SalBow6G1894 Salvia bowleyana HOM05D003467 ORTHO05D004220 7.0e-40 169.1 97 96.9
SalBow3G0400 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.2e-39 168.3 97 96.9
SalBow5G0161 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.2e-39 168.3 97 96.9
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 2.6e-39 167.2 239 49.8
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 4.5e-39 166.4 288 41.7
SalBow3G3302 Salvia bowleyana HOM05D000482 ORTHO05D000349 7.7e-39 165.6 97 95.9
SalBow1G5674 Salvia bowleyana HOM05D000482 ORTHO05D000349 1.0e-38 165.2 97 95.9
SalBow2G3554 Salvia bowleyana HOM05D000482 ORTHO05D004220 2.2e-38 164.1 97 93.8
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 2.5e-37 160.6 287 41.1
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 4.2e-37 159.8 275 45.8
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-36 158.3 253 45.5
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 2.1e-36 157.5 247 48.2
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 3.6e-36 156.8 294 44.2
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 4.7e-36 156.4 245 43.7
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 4.7e-36 156.4 209 50.7
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 4.7e-36 156.4 276 45.7
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 8.0e-36 155.6 245 43.3
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 1.4e-35 154.8 268 43.7
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 4.0e-35 153.3 253 45.5
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 4.0e-35 153.3 207 53.6
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.7e-35 152.5 211 47.9
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-34 150.6 218 50.0
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 2.6e-34 150.6 364 36.0
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 9.7e-34 148.7 247 45.7
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 2.2e-33 147.5 256 39.1
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 4.8e-33 146.4 229 47.6
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 8.2e-33 145.6 325 37.5
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-32 145.2 229 45.9
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.4e-32 144.8 280 42.5
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 4.1e-32 143.3 296 39.2
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.0e-32 142.5 287 39.7
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 7.0e-32 142.5 225 44.4
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 7.0e-32 142.5 258 45.0
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 2.7e-31 140.6 259 38.6
SalBow1G0056 Salvia bowleyana HOM05D003467 ORTHO05D004220 2.7e-31 140.6 80 92.5
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 5.9e-31 139.4 242 45.0
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-30 137.9 252 45.2
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-30 137.1 238 43.3
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 8.5e-30 135.6 193 53.4
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 1.1e-29 135.2 245 38.4
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 1.9e-29 134.4 202 45.0
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.9e-29 134.4 203 45.3
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-29 134.4 225 42.7
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 7.2e-29 132.5 319 32.9
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 1.4e-27 128.3 199 47.2
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-27 127.5 231 42.0
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 5.2e-27 126.3 212 49.1
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-26 124.0 210 42.9
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 5.7e-26 122.9 198 47.0
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 4.8e-25 119.8 290 39.7
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 1.1e-24 118.6 126 59.5
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 4.1e-24 116.7 396 31.6
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 9.1e-24 115.5 151 51.0
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-23 114.4 150 56.7
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 2.7e-23 114.0 151 56.3
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 4.5e-23 113.2 135 56.3
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 4.5e-23 113.2 132 53.8
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 1.3e-22 111.7 134 51.5
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-21 107.8 213 41.3
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.5e-21 107.5 229 38.9
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 7.2e-21 105.9 231 37.2
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 6.1e-20 102.8 122 54.1
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 4.0e-19 100.1 147 46.9
ATR0660G011 Amborella trichopoda HOM05D003467 ORTHO05D004220 1.2e-18 98.6 109 55.0
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 2.0e-18 97.8 122 53.3
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 2.0e-18 97.8 231 35.5
Phvul.008G005400 Phaseolus vulgaris HOM05D003467 ORTHO05D004220 2.0e-18 97.8 231 38.5
Lsat_1_v5_gn_4_83901 Lactuca sativa HOM05D003467 ORTHO05D004220 2.6e-18 97.4 233 36.1
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 5.7e-18 96.3 231 35.1
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 5.7e-18 96.3 237 35.4
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 7.5e-18 95.9 230 37.0
VMungo1383G2739 Vigna mungo HOM05D003467 ORTHO05D004220 2.8e-17 94.0 235 37.0
Lsat_1_v5_gn_5_114100 Lactuca sativa HOM05D003467 ORTHO05D004220 3.7e-17 93.6 141 41.8
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 4.9e-17 93.2 142 49.3
SHI44577 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-17 92.8 107 54.2
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-16 92.0 158 44.9
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-16 90.9 106 56.6
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 4.1e-16 90.1 227 37.0
Lsat_1_v5_gn_5_163900 Lactuca sativa HOM05D003467 ORTHO05D004220 1.6e-15 88.2 138 41.3
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-15 87.8 178 38.8
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-15 87.8 238 35.3
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 3.5e-15 87.0 248 34.7
Lsat_1_v5_gn_7_88480 Lactuca sativa HOM05D003467 ORTHO05D004220 4.5e-15 86.7 257 33.1
Medtr7g007070 Medicago truncatula HOM05D003467 ORTHO05D004220 1.7e-14 84.7 229 35.4
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 2.9e-14 84.0 200 37.5
SHI42502 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-13 82.0 80 60.0
Lsat_1_v5_gn_8_11861 Lactuca sativa HOM05D003467 ORTHO05D004220 4.3e-13 80.1 224 29.5
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.3e-13 80.1 107 49.5
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 7.3e-13 79.3 250 35.2
SEGI_40930 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 9.5e-13 79.0 283 30.4
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 1.2e-12 78.6 130 45.4
Lsat_1_v5_gn_3_81380 Lactuca sativa HOM05D003467 ORTHO05D004220 1.6e-12 78.2 129 41.1
Psat3g204920 Pisum sativum HOM05D003467 ORTHO05D004220 3.6e-12 77.0 186 38.2
SHI43969 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-11 75.5 94 51.1
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-11 74.3 136 46.3
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 3.0e-11 73.9 153 40.5
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.6e-10 70.9 134 41.8
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 3.4e-10 70.5 150 41.3
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 4.4e-10 70.1 199 33.7
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 4.4e-10 70.1 103 49.5
SGA_v2.0_scaffold361G49910 Striga asiatica HOM05D003467 ORTHO05D004220 9.8e-10 68.9 76 57.9
Lj1g0022622 Lotus japonicus HOM05D003467 ORTHO05D004220 1.7e-09 68.2 220 31.8
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 8.3e-09 65.9 155 37.4
Lsat_1_v5_gn_1_70701 Lactuca sativa HOM05D003467 ORTHO05D004220 1.1e-08 65.5 78 51.3
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 1.4e-08 65.1 82 51.2
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-08 65.1 119 43.7
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 2.4e-08 64.3 82 50.0
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 2.4e-08 64.3 82 50.0
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-08 64.3 98 42.9
Lsat_1_v5_gn_3_78181 Lactuca sativa HOM05D003467 ORTHO05D004220 4.1e-08 63.5 77 46.8
Lsat_1_v5_gn_7_5320 Lactuca sativa HOM05D003467 ORTHO05D004220 4.1e-08 63.5 60 53.3
TPR.G9704 Trifolium pratense HOM05D003467 ORTHO05D004220 1.6e-07 61.6 83 45.8
Lsat_1_v5_gn_5_28101 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-06 58.5 303 26.1
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.3e-06 58.5 90 43.3
SHI34617 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-06 57.8 59 59.3
SalBow7G4536 Salvia bowleyana HOM05D000482 ORTHO05D000349 3.0e-06 57.4 31 90.3
Lsat_1_v5_gn_9_41861 Lactuca sativa HOM05D003467 ORTHO05D004220 3.9e-06 57.0 191 32.5
Lsat_1_v5_gn_4_71160 Lactuca sativa HOM05D003467 ORTHO05D004220 5.0e-06 56.6 34 76.5
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 8.6e-06 55.8 129 40.3


User provided reference genes

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