Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4279 Salvia bowleyana HOM05D008392 ORTHO05D010441 7.2e-195 683.7 342 100.0
Dinv24467 Davidia involucrata HOM05D008392 ORTHO05D010441 4.8e-58 229.2 339 41.3
SGA_v2.0_scaffold4G01973 Striga asiatica HOM05D008392 ORTHO05D010441 2.7e-56 223.4 298 45.3
Peaxi162Scf01061g00127 Petunia axillaris HOM05D008392 ORTHO05D010441 2.5e-54 216.9 357 40.6
CAN.G1076.23 Capsicum annuum HOM05D008392 ORTHO05D010441 4.0e-52 209.5 327 40.1
Actinidia35516 Actinidia chinensis HOM05D008392 ORTHO05D010441 1.3e-50 204.5 343 39.4
Cc02_g35180 Coffea canephora HOM05D008392 ORTHO05D010441 1.3e-50 204.5 332 39.5
Oeu053741.2 Olea europaea HOM05D008392 ORTHO05D010441 8.3e-50 201.8 400 36.5
Sopen01g044120 Solanum pennellii HOM05D008392 ORTHO05D010441 3.5e-48 196.4 334 37.4
Solyc01g100620.3 Solanum lycopersicum HOM05D008392 ORTHO05D010441 3.0e-44 183.3 323 39.9
Nitab4.5_0004525g0010 Nicotiana tabacum HOM05D008392 ORTHO05D010441 6.0e-40 169.1 331 36.6
Migut.B00948 Erythranthe guttata HOM05D008392 ORTHO05D010441 1.1e-38 164.9 202 51.0
vmacro01573 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 3.6e-37 159.8 352 36.1
TAR362G1147 Trochodendron aralioides HOM05D001261 ORTHO05D010441 1.8e-36 157.5 393 32.6
Nitab4.5_0001338g0070 Nicotiana tabacum HOM05D008392 ORTHO05D010441 1.5e-35 154.5 365 34.8
Rhsim11G0096300 Rhododendron simsii HOM05D008392 ORTHO05D010441 2.9e-34 150.2 330 34.2
DCAR_005422 Daucus carota HOM05D008392 ORTHO05D010441 1.6e-32 144.4 354 33.9
DCAR_025288 Daucus carota HOM05D008392 ORTHO05D010441 8.6e-31 138.7 348 34.2
Nn5g30235 Nelumbo nucifera HOM05D001261 ORTHO05D010441 9.5e-30 135.2 353 30.9
QL03p014198 Quercus lobata HOM05D008392 ORTHO05D010441 4.7e-29 132.9 335 33.4
CANSAT54G2036 Cannabis sativa HOM05D008392 ORTHO05D010441 1.4e-28 131.3 282 32.6
Lsat_1_v5_gn_5_40160 Lactuca sativa HOM05D008392 ORTHO05D010441 1.8e-28 131.0 247 36.0
Prupe.6G312100 Prunus persica HOM05D008392 ORTHO05D010441 1.5e-27 127.9 266 33.8
Aqoxy2G02705 Aquilegia oxysepala HOM05D001261 ORTHO05D010441 2.0e-27 127.5 351 29.3
MD04G1192900 Malus domestica HOM05D008392 ORTHO05D010441 4.1e-25 119.8 275 32.4
MD12G1204900 Malus domestica HOM05D008392 ORTHO05D010441 7.8e-24 115.5 272 33.1
VMungo0720G2188 Vigna mungo HOM05D008392 ORTHO05D010441 1.3e-23 114.8 320 27.5
MD12G1205000 Malus domestica HOM05D008392 ORTHO05D010441 6.6e-23 112.5 298 33.2
Psat6g152920 Pisum sativum HOM05D008392 ORTHO05D010441 6.6e-23 112.5 312 31.4
Lj5g0025247 Lotus japonicus HOM05D008392 ORTHO05D010441 8.6e-23 112.1 266 31.6
Lalb_Chr19g0129211 Lupinus albus HOM05D008392 ORTHO05D010441 7.3e-22 109.0 277 30.0
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 4.7e-21 106.3 341 29.6
Phvul.007G202100 Phaseolus vulgaris HOM05D008392 ORTHO05D010441 4.7e-21 106.3 288 28.5
Psat6g152960 Pisum sativum HOM05D008392 ORTHO05D010441 4.0e-20 103.2 320 29.7
Ca_10178_v3 Cicer arietinum L. HOM05D008392 ORTHO05D010441 1.5e-19 101.3 245 29.8
Glyma.20G096200 Glycine max HOM05D008392 ORTHO05D010441 1.3e-18 98.2 310 27.4
arahy.Tifrunner.gnm1.ann1.S3TC9P Arachis hypogaea HOM05D008392 ORTHO05D010441 1.1e-17 95.1 237 28.7
arahy.Tifrunner.gnm1.ann1.DRX87E Arachis hypogaea HOM05D008392 ORTHO05D010441 1.9e-17 94.4 235 28.5
Medtr5g080030 Medicago truncatula HOM05D008392 ORTHO05D010441 4.2e-17 93.2 258 27.1
Medtr5g095070 Medicago truncatula HOM05D008392 ORTHO05D010441 1.2e-16 91.7 256 28.5
Lalb_Chr06g0167451 Lupinus albus HOM05D008392 ORTHO05D010441 1.3e-15 88.2 263 30.0
RcHm_v2.0_Chr3g0457251 Rosa chinensis HOM05D008392 ORTHO05D010441 1.7e-15 87.8 330 26.4
ATR0693G224 Amborella trichopoda HOM05D001261 ORTHO05D001130 6.6e-15 85.9 359 25.9
Lj1g0008102 Lotus japonicus HOM05D008392 ORTHO05D010441 1.5e-14 84.7 256 25.8
MBI19_g03251_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 4.3e-14 83.2 141 39.0
Migut.B00949 Erythranthe guttata HOM05D008392 ORTHO05D010441 2.8e-13 80.5 73 60.3
Glyma.10G146432 Glycine max HOM05D008392 ORTHO05D010441 8.1e-13 79.0 97 39.2
FAN02G4301 Fragaria x ananassa HOM05D001457 ORTHO05D010441 1.1e-12 78.6 344 27.0
FAN05G3611 Fragaria x ananassa HOM05D008392 ORTHO05D010441 4.0e-12 76.6 330 26.1
CDE08G0491 Ceratophyllum demersum HOM05D008392 ORTHO05D010441 9.0e-12 75.5 320 25.0
FAN14G5205 Fragaria x ananassa HOM05D001457 ORTHO05D010441 1.5e-11 74.7 109 40.4
FvH4_6g07580 Fragaria vesca HOM05D008392 ORTHO05D010441 3.4e-11 73.6 344 26.5
Psat0s3339g0160 Pisum sativum HOM05D008392 ORTHO05D010441 9.9e-11 72.0 105 37.1
HPP92_009907 Vanilla planifolia HOM05D001261 ORTHO05D001130 1.7e-10 71.2 362 23.8
Lalb_Chr21g0307471 Lupinus albus HOM05D001261 ORTHO05D001130 4.9e-10 69.7 387 25.8
Actinidia16864 Actinidia chinensis HOM05D008392 ORTHO05D010441 2.4e-09 67.4 212 33.0
AUR62013853 Chenopodium quinoa HOM05D001261 ORTHO05D001130 7.1e-09 65.9 282 24.5
AUR62036749 Chenopodium quinoa HOM05D001261 ORTHO05D001130 7.1e-09 65.9 281 24.6
Actinidia17023 Actinidia chinensis HOM05D001261 ORTHO05D001130 9.3e-09 65.5 225 24.9
CiPaw.01G121000 Carya illinoinensis HOM05D001261 ORTHO05D001130 1.2e-08 65.1 337 23.1
CDE02G4389 Ceratophyllum demersum HOM05D001261 ORTHO05D001130 1.2e-08 65.1 261 25.7
Medtr1g116180 Medicago truncatula HOM05D001261 ORTHO05D001130 2.1e-08 64.3 368 25.5
Actinidia15468 Actinidia chinensis HOM05D001261 ORTHO05D001130 2.7e-08 63.9 263 24.7
EL10Ac3g07478 Beta vulgaris HOM05D001261 ORTHO05D001130 6.0e-08 62.8 318 23.0
Lj1g0017531 Lotus japonicus HOM05D001261 ORTHO05D001130 3.0e-07 60.5 309 23.6
PSO210G5207 Papaver somniferum HOM05D001261 ORTHO05D001130 3.9e-07 60.1 271 25.1
SMO367G0512 Selaginella moellendorffii HOM05D001261 ORTHO05D001130 5.1e-07 59.7 279 25.4
Manes.15G053800 Manihot esculenta HOM05D001261 ORTHO05D001130 6.6e-07 59.3 344 23.3
PSO170G1184 Papaver somniferum HOM05D001261 ORTHO05D001130 6.6e-07 59.3 270 24.4
Thecc.04G201600 Theobroma cacao HOM05D001261 ORTHO05D001130 1.1e-06 58.5 85 37.6
CAN.G401.4 Capsicum annuum HOM05D001261 ORTHO05D001130 1.5e-06 58.2 235 25.5
Lsat_1_v5_gn_9_46720 Lactuca sativa HOM05D001261 ORTHO05D001130 1.9e-06 57.8 273 24.9
TPR.G15603 Trifolium pratense HOM05D001261 ORTHO05D001130 1.9e-06 57.8 329 24.3
Cfa016960 Carpinus fangiana HOM05D001261 ORTHO05D001130 2.5e-06 57.4 263 24.7
SGA_v2.0_scaffold145G36109 Striga asiatica HOM05D001261 ORTHO05D001130 2.5e-06 57.4 237 25.7
Cpa.g.sc26.248 Carica papaya HOM05D001261 ORTHO05D001130 3.3e-06 57.0 268 24.6
Lj4A16T126 Lonicera japonica HOM05D001261 ORTHO05D001130 3.3e-06 57.0 236 23.7
Medtr7g005970 Medicago truncatula HOM05D001261 ORTHO05D001130 3.3e-06 57.0 331 24.8
Nn5g30869 Nelumbo nucifera HOM05D001261 ORTHO05D001130 3.3e-06 57.0 336 23.8
Ciclev10001816m.g Citrus clementina HOM05D001261 ORTHO05D001130 4.3e-06 56.6 263 25.9
Solyc12g094440.2 Solanum lycopersicum HOM05D001261 ORTHO05D001130 5.6e-06 56.2 223 25.6
Sopen12g031330 Solanum pennellii HOM05D001261 ORTHO05D001130 7.3e-06 55.8 232 26.3
Actinidia16865 Actinidia chinensis HOM05D008392 ORTHO05D010441 9.6e-06 55.5 92 37.0
ECA232G0527 Erigeron canadensis HOM05D001261 ORTHO05D001130 9.6e-06 55.5 251 24.3


User provided reference genes

Program Settings