Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 3.1e-101 371.7 173 100.0
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 5.8e-60 234.6 175 66.3
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.1e-55 220.3 177 61.6
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 3.1e-53 212.2 171 59.1
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 5.3e-53 211.5 174 59.2
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 7.6e-52 207.6 174 58.0
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.3e-51 206.8 174 58.6
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.1e-50 203.8 175 57.1
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.3e-48 196.8 142 64.1
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 2.3e-48 196.1 175 56.6
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.3e-48 196.1 174 56.9
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 5.1e-48 194.9 174 54.6
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 5.1e-48 194.9 174 54.6
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.5e-47 193.4 174 55.2
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 3.3e-47 192.2 173 55.5
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.3e-47 191.8 174 54.6
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 4.3e-47 191.8 149 60.4
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 7.4e-47 191.0 174 54.6
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 1.6e-46 189.9 174 53.4
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 3.7e-46 188.7 141 59.6
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 6.3e-46 188.0 150 59.3
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 8.2e-46 187.6 149 59.1
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.8e-45 186.4 174 53.4
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.8e-45 186.4 175 50.9
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 2.4e-45 186.0 175 53.7
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 3.1e-45 185.7 174 54.6
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 6.9e-45 184.5 176 54.5
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 6.9e-45 184.5 176 54.5
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 9.0e-45 184.1 176 54.5
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.2e-44 183.7 170 53.5
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 2.0e-44 183.0 174 52.9
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 4.5e-44 181.8 159 54.1
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 1.0e-43 180.6 163 54.6
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.0e-43 180.6 176 52.3
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.7e-43 179.9 214 45.3
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 2.2e-43 179.5 173 50.9
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 2.2e-43 179.5 173 50.9
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 2.2e-43 179.5 173 50.9
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 2.2e-43 179.5 173 50.9
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 2.2e-43 179.5 173 50.9
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 2.2e-43 179.5 158 53.8
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 2.9e-43 179.1 176 51.7
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 5.0e-43 178.3 174 53.4
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 6.5e-43 177.9 173 51.4
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 6.5e-43 177.9 167 53.9
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 1.4e-42 176.8 173 50.9
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.4e-42 176.8 176 50.6
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 2.5e-42 176.0 167 53.3
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 7.2e-42 174.5 165 52.1
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 7.2e-42 174.5 174 50.0
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 9.4e-42 174.1 134 56.0
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 1.6e-41 173.3 174 49.4
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.6e-41 173.3 186 48.9
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.6e-41 173.3 148 54.1
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.1e-41 172.9 163 50.9
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 2.7e-41 172.6 173 49.1
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 3.6e-41 172.2 147 55.8
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 3.6e-41 172.2 151 55.0
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 4.6e-41 171.8 173 49.1
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 4.6e-41 171.8 173 49.1
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 4.6e-41 171.8 168 48.8
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 6.1e-41 171.4 173 48.0
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 6.1e-41 171.4 154 52.6
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.0e-40 170.6 173 52.6
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 1.8e-40 169.9 174 50.6
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.8e-40 169.9 134 56.0
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 3.0e-40 169.1 173 50.3
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 3.9e-40 168.7 161 50.9
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 3.9e-40 168.7 148 53.4
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 5.1e-40 168.3 131 57.3
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 5.1e-40 168.3 145 53.8
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 8.8e-40 167.5 134 53.0
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.5e-39 166.8 174 49.4
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 2.0e-39 166.4 164 47.6
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.0e-39 166.4 173 48.6
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 2.5e-39 166.0 173 46.8
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.5e-39 166.0 149 49.7
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 3.3e-39 165.6 173 46.8
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 9.7e-39 164.1 174 48.9
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.3e-38 163.7 175 51.4
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.7e-38 163.3 148 50.7
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 2.2e-38 162.9 148 50.7
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 3.7e-38 162.2 164 50.0
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 3.7e-38 162.2 155 52.9
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 3.7e-38 162.2 164 51.2
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 6.3e-38 161.4 173 46.2
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 6.3e-38 161.4 165 48.5
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 6.3e-38 161.4 81 81.5
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 8.2e-38 161.0 173 46.8
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 2.4e-37 159.5 142 51.4
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 6.9e-37 157.9 192 43.8
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 9.1e-37 157.5 174 46.0
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 1.5e-36 156.8 215 42.3
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 5.9e-36 154.8 150 52.0
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.0e-35 154.1 155 52.3
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.2e-35 152.9 148 51.4
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 5.0e-35 151.8 78 78.2
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.1e-34 150.6 77 77.9
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.5e-34 149.4 77 77.9
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.5e-34 149.4 78 74.4
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 3.2e-34 149.1 191 43.5
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.6e-33 146.7 147 50.3
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.1e-31 140.6 88 70.5
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 7.7e-28 127.9 151 45.0
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 1.3e-27 127.1 122 50.0
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 6.1e-25 118.2 173 40.5
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.0e-24 117.5 131 49.6
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.4e-24 117.1 122 49.2
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.2e-22 109.8 130 49.2
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.8e-21 106.7 130 48.5
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 3.1e-21 105.9 139 44.6
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 6.5e-19 98.2 135 34.8
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.1e-18 97.4 126 45.2
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.0e-16 90.9 123 44.7
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.0e-16 90.9 123 44.7
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 6.8e-16 88.2 125 44.0
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 8.8e-16 87.8 130 43.8
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 1.1e-10 70.9 133 36.1
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 4.2e-10 68.9 36 77.8
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.6e-09 67.0 102 36.3
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 3.7e-06 55.8 64 48.4


User provided reference genes

Program Settings