Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3724 Salvia bowleyana HOM05D005691 ORTHO05D007096 1.1e-72 276.6 138 100.0
SalBow7G1588 Salvia bowleyana HOM05D005691 ORTHO05D007096 3.6e-44 181.8 97 91.8
Migut.M00032 Erythranthe guttata HOM05D005691 ORTHO05D007096 5.0e-30 134.8 102 62.7
MSTRG.6644 Avicennia marina HOM05D005691 ORTHO05D007096 3.6e-28 128.6 99 59.6
Dinv07866 Davidia involucrata HOM05D005691 ORTHO05D007096 1.8e-27 126.3 102 56.9
PGSC0003DMG400006150 Solanum tuberosum HOM05D005691 ORTHO05D007096 2.9e-25 119.0 99 55.6
Nitab4.5_0000441g0080 Nicotiana tabacum HOM05D005691 ORTHO05D007096 2.4e-24 115.9 99 54.5
Nitab4.5_0009877g0010 Nicotiana tabacum HOM05D005691 ORTHO05D007096 2.4e-24 115.9 99 55.6
Peaxi162Scf00776g00233 Petunia axillaris HOM05D005691 ORTHO05D007096 2.4e-24 115.9 99 54.5
GSVIVG01030051001 Vitis vinifera HOM05D005691 ORTHO05D007096 4.1e-24 115.2 100 56.0
Sopen07g024300 Solanum pennellii HOM05D005691 ORTHO05D007096 9.2e-24 114.0 99 54.5
Thecc.01G191500 Theobroma cacao HOM05D005691 ORTHO05D007096 1.2e-23 113.6 102 51.0
CAN.G854.9 Capsicum annuum HOM05D005691 ORTHO05D007096 1.6e-23 113.2 99 51.5
Manes.12G061100 Manihot esculenta HOM05D005691 ORTHO05D007096 7.8e-23 110.9 102 52.9
Hma1.2p1_0133F.1_g061370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 1.3e-22 110.2 105 53.3
TWI18G1215 Tripterygium wilfordii HOM05D005691 ORTHO05D007096 2.3e-22 109.4 102 51.0
QL08p028494 Quercus lobata HOM05D005691 ORTHO05D007096 2.9e-22 109.0 94 58.5
TAR626G0169 Trochodendron aralioides HOM05D005691 ORTHO05D007096 2.9e-22 109.0 98 53.1
HanXRQChr03g0075241 Helianthus annuus HOM05D005691 ORTHO05D007096 3.9e-22 108.6 97 54.6
Oeu029977.1 Olea europaea HOM05D005691 ORTHO05D007096 3.9e-22 108.6 97 52.6
CSS0040753 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 6.6e-22 107.8 99 50.5
Lj8A134T75 Lonicera japonica HOM05D005691 ORTHO05D007096 8.6e-22 107.5 97 52.6
Atru.chr6.3368 Acer truncatum HOM05D005691 ORTHO05D007096 1.5e-21 106.7 102 50.0
CiPaw.03G279200 Carya illinoinensis HOM05D005691 ORTHO05D007096 1.9e-21 106.3 97 52.6
CSS0009966 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 3.3e-21 105.5 96 51.0
SGA_v2.0_scaffold73G24511 Striga asiatica HOM05D005691 ORTHO05D007096 3.3e-21 105.5 99 53.5
ECA240G2675 Erigeron canadensis HOM05D005691 ORTHO05D007096 7.3e-21 104.4 96 54.2
Hma1.2p1_0133F.1_g061380 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 9.5e-21 104.0 98 54.1
Sc21g0000790 Simmondsia chinensis HOM05D005691 ORTHO05D007096 9.5e-21 104.0 98 52.0
AUR62015058 Chenopodium quinoa HOM05D005691 ORTHO05D007096 1.2e-20 103.6 100 47.0
Actinidia21444 Actinidia chinensis HOM05D005691 ORTHO05D007096 1.6e-20 103.2 99 49.5
Gohir.A07G191000 Gossypium hirsutum HOM05D005691 ORTHO05D007096 1.6e-20 103.2 103 47.6
PSO675G5893 Papaver somniferum HOM05D005691 ORTHO05D007096 2.1e-20 102.8 96 49.0
Prupe.3G200800 Prunus persica HOM05D005691 ORTHO05D007096 2.1e-20 102.8 97 47.4
THA.LOC104815358 Tarenaya hassleriana HOM05D005691 ORTHO05D007096 2.1e-20 102.8 100 48.0
BcaB06g26838 Brassica carinata HOM05D005691 ORTHO05D007096 2.8e-20 102.4 96 47.9
AUR62017514 Chenopodium quinoa HOM05D005691 ORTHO05D007096 3.6e-20 102.1 100 46.0
Haze_12684 Corylus avellana HOM05D005691 ORTHO05D007096 8.0e-20 100.9 97 50.5
Lsat_1_v5_gn_9_104801 Lactuca sativa HOM05D005691 ORTHO05D007096 8.0e-20 100.9 99 51.5
MBI16_g26390_MAGBIO Magnolia biondii HOM05D005691 ORTHO05D007096 8.0e-20 100.9 102 44.1
unitig_746.g26642 Utricularia gibba HOM05D005691 ORTHO05D007096 8.0e-20 100.9 99 50.5
CsaV3_7G002600 Cucumis sativus L. HOM05D005691 ORTHO05D007096 1.0e-19 100.5 102 48.0
Cc00_g04460 Coffea canephora HOM05D005691 ORTHO05D007096 1.4e-19 100.1 100 47.0
Nn1g07449 Nelumbo nucifera HOM05D005691 ORTHO05D007096 1.4e-19 100.1 95 51.6
Sp3g23610 Schrenkiella parvula HOM05D005691 ORTHO05D007096 1.8e-19 99.8 100 48.0
vmacro09398 Vaccinium macrocarpon HOM05D005691 ORTHO05D007096 2.3e-19 99.4 87 51.7
MELO3C024202.2 Cucumis melo HOM05D005691 ORTHO05D007096 4.0e-19 98.6 99 48.5
Sed0003649 Sechium edule HOM05D005691 ORTHO05D007096 4.0e-19 98.6 99 48.5
DCAR_019708 Daucus carota HOM05D005691 ORTHO05D007096 6.8e-19 97.8 92 50.0
Ciclev10014054m.g Citrus clementina HOM05D005691 ORTHO05D007096 8.9e-19 97.4 102 45.1
EL10Ac9g22718 Beta vulgaris HOM05D005691 ORTHO05D007096 1.2e-18 97.1 102 45.1
ClCG02G002780 Citrullus lanatus HOM05D005691 ORTHO05D007096 2.6e-18 95.9 99 47.5
SGA_v2.0_scaffold292G47412 Striga asiatica HOM05D005691 ORTHO05D007096 3.4e-18 95.5 103 51.5
BcaB08g34496 Brassica carinata HOM05D005691 ORTHO05D007096 7.5e-18 94.4 96 44.8
Cpa.g.sc211.12 Carica papaya HOM05D005691 ORTHO05D007096 7.5e-18 94.4 89 49.4
CANSAT64G0049 Cannabis sativa HOM05D005691 ORTHO05D007096 9.8e-18 94.0 99 45.5
Thhalv10003521m.g Eutrema salsugineum HOM05D005691 ORTHO05D007096 1.3e-17 93.6 99 45.5
FvH4_6g40930 Fragaria vesca HOM05D005691 ORTHO05D007096 1.7e-17 93.2 91 46.2
FAN14G0170 Fragaria x ananassa HOM05D005691 ORTHO05D007096 1.7e-17 93.2 91 46.2
FAN09G3499 Fragaria x ananassa HOM05D005691 ORTHO05D007096 2.2e-17 92.8 89 46.1
Rhsim04G0038700 Rhododendron simsii HOM05D005691 ORTHO05D007096 2.2e-17 92.8 98 44.9
Hund01594 Selenicereus undatus HOM05D005691 ORTHO05D007096 2.2e-17 92.8 89 48.3
MD17G1113600 Malus domestica HOM05D005691 ORTHO05D007096 3.7e-17 92.0 97 41.2
AL3G42730 Arabidopsis lyrata HOM05D005691 ORTHO05D007096 6.4e-17 91.3 98 43.9
RcHm_v2.0_Chr2g0156551 Rosa chinensis HOM05D005691 ORTHO05D007096 8.3e-17 90.9 97 44.3
Carub.0003s2665 Capsella rubella HOM05D005691 ORTHO05D007096 1.1e-16 90.5 98 44.9
Lalb_Chr10g0107611 Lupinus albus HOM05D005691 ORTHO05D007096 1.4e-16 90.1 103 37.9
Phvul.008G284900 Phaseolus vulgaris HOM05D005691 ORTHO05D007096 1.4e-16 90.1 87 44.8
Sabra02G0169100 Salix brachista HOM05D005691 ORTHO05D007096 1.4e-16 90.1 93 45.2
VMungo0647G0393 Vigna mungo HOM05D005691 ORTHO05D007096 1.9e-16 89.7 87 46.0
Glyma.02G305200 Glycine max HOM05D005691 ORTHO05D007096 2.4e-16 89.4 87 43.7
FAN05G1189 Fragaria x ananassa HOM05D005691 ORTHO05D007096 3.2e-16 89.0 86 45.3
Glyma.14G008200 Glycine max HOM05D005691 ORTHO05D007096 5.4e-16 88.2 87 43.7
Potri.002G221300 Populus trichocarpa HOM05D005691 ORTHO05D007096 1.2e-15 87.0 80 48.8
arahy.Tifrunner.gnm1.ann1.2CK2M8 Arachis hypogaea HOM05D005691 ORTHO05D007096 2.0e-15 86.3 99 40.4
FAN02G1659 Fragaria x ananassa HOM05D005691 ORTHO05D007096 2.0e-15 86.3 88 44.3
ATR1149G135 Amborella trichopoda HOM05D005691 ORTHO05D007096 1.0e-14 84.0 81 53.1
arahy.Tifrunner.gnm1.ann1.5BD1HA Arachis hypogaea HOM05D005691 ORTHO05D007096 1.0e-14 84.0 99 39.4
Eucgr.A01048 Eucalyptus grandis HOM05D005691 ORTHO05D007096 1.0e-14 84.0 102 41.2
LjContig00081g0016683 Lotus japonicus HOM05D005691 ORTHO05D007096 2.3e-14 82.8 103 37.9
PGR042G3586 Punica granatum HOM05D005691 ORTHO05D007096 3.9e-14 82.0 93 44.1
SGA_v2.0_scaffold292G47401 Striga asiatica HOM05D005691 ORTHO05D007096 5.0e-14 81.6 101 47.5
A03p44570 Brassica napus HOM05D005691 ORTHO05D007096 6.6e-14 81.3 92 42.4
BraA03t13590Z Brassica rapa HOM05D005691 ORTHO05D007096 6.6e-14 81.3 92 42.4
C03p55370 Brassica napus HOM05D005691 ORTHO05D007096 8.6e-14 80.9 92 42.4
Aqoxy4G02218 Aquilegia oxysepala HOM05D005691 ORTHO05D007096 1.5e-13 80.1 92 43.5
BcaC01g03178 Brassica carinata HOM05D005691 ORTHO05D007096 1.9e-13 79.7 92 41.3
BolC3t17809H Brassica oleracea HOM05D005691 ORTHO05D007096 1.9e-13 79.7 92 41.3
Ca_06452_v3 Cicer arietinum L. HOM05D005691 ORTHO05D007096 3.3e-13 79.0 94 43.6
TPR.G1235 Trifolium pratense HOM05D005691 ORTHO05D007096 2.1e-12 76.3 93 37.6
Zm00001eb399630 Zea mays HOM05D005691 ORTHO05D007096 3.6e-12 75.5 89 42.7
BcaC06g35896 Brassica carinata HOM05D005691 ORTHO05D007096 4.7e-12 75.1 87 42.5
Os03g0225500 Oryza sativa ssp. japonica HOM05D005691 ORTHO05D007096 4.7e-12 75.1 90 43.3
Psat2g005000 Pisum sativum HOM05D005691 ORTHO05D007096 8.1e-12 74.3 88 42.0
CDE04G3337 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 1.1e-11 73.9 93 39.8
Medtr5g097260 Medicago truncatula HOM05D005691 ORTHO05D007096 1.1e-11 73.9 92 39.1
SEGI_38606 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 1.4e-11 73.6 92 39.1
HPP92_000880 Vanilla planifolia HOM05D005691 ORTHO05D007096 3.1e-11 72.4 100 36.0
Mapoly0061s0124 Marchantia polymorpha HOM05D005691 ORTHO05D007096 1.7e-06 56.6 87 32.2
Gohir.D07G197400 Gossypium hirsutum HOM05D005691 ORTHO05D007096 2.3e-06 56.2 51 47.1
Gorai.001G221100 Gossypium raimondii HOM05D005691 ORTHO05D007096 8.6e-06 54.3 51 45.1


User provided reference genes

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