Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 3076.2 1646 100.0
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1910.6 1716 65.6
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1871.3 1732 64.6
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1636.7 1730 58.8
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1614.0 1724 58.6
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1443.3 1713 54.6
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1431.4 1786 52.1
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1426.4 1785 52.5
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1395.9 1717 53.7
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1383.6 1725 53.4
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1379.8 1654 53.3
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1376.7 1759 51.6
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1375.5 1717 53.8
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1373.6 1735 52.0
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1373.2 1773 50.9
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1371.7 1721 52.6
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1368.6 1752 52.5
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1357.4 1729 52.5
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1354.0 1755 51.0
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1337.8 1737 50.4
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1332.0 1740 51.4
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1326.2 1747 50.8
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1318.9 1757 51.0
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1308.5 1757 51.4
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1294.3 1830 49.0
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1286.2 1415 57.0
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1284.2 1744 48.5
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1283.9 1749 49.8
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1278.5 1748 48.5
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1277.3 1743 48.6
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1275.4 1675 50.5
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1274.6 1750 49.1
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1268.4 1739 49.6
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1261.5 1757 48.2
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1261.5 1746 48.8
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1260.7 1744 49.1
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1260.7 1732 49.2
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1259.2 1725 49.3
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1256.9 1744 49.0
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1239.6 1725 48.4
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1238.0 1489 54.6
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1238.0 1748 48.1
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1231.9 1950 45.1
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1229.5 1663 50.6
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1226.8 1717 48.8
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1226.8 1751 47.9
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1225.3 1761 47.7
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1225.3 1686 48.9
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1224.9 1762 48.8
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1216.8 1800 47.4
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1215.7 1764 47.9
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1211.4 1710 48.2
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1209.1 1754 47.3
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1206.8 1746 47.1
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1206.4 1741 47.3
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1204.1 1746 47.0
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1201.0 1747 47.2
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1194.9 1814 47.8
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1187.6 1517 52.2
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1186.8 1680 48.6
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1172.9 1785 46.3
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1167.9 1242 59.7
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1162.9 1251 59.2
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1149.4 1635 48.5
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1147.1 1540 50.4
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 1145.6 1477 52.4
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1112.8 1227 57.0
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1089.7 1459 49.2
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 3.3e-306 1055.8 1243 55.1
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 1.7e-302 1043.5 957 63.3
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 5.0e-302 1042.0 1250 54.7
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 1.6e-295 1020.4 1331 50.0
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 6.3e-289 998.4 1301 52.7
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 6.1e-284 981.9 1138 55.0
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 2.4e-280 969.9 1136 54.4
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 1.5e-277 960.7 1726 41.4
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.4e-275 954.1 1019 60.4
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.5e-263 912.9 952 57.1
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 2.1e-260 903.7 831 62.1
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 4.0e-259 899.4 1261 48.9
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 9.9e-242 841.6 1484 43.3
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.4e-227 794.7 1557 39.4
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 3.0e-222 776.9 1214 45.6
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 3.7e-180 637.1 1060 45.6
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 6.8e-158 563.1 872 42.5
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 1.1e-131 476.1 752 45.1
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.5e-128 464.9 577 50.4
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.2e-125 456.1 514 54.5
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.3e-119 436.0 1151 32.4
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.1e-110 406.4 751 41.8
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 1.2e-82 313.2 737 38.7
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.5e-75 288.9 667 37.3
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 5.4e-70 271.2 258 57.8
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 9.5e-59 233.8 518 37.1
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 5.7e-56 224.6 229 54.6
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 7.5e-56 224.2 474 36.9
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 2.1e-50 206.1 207 56.5
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 2.0e-48 199.5 193 57.0
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 8.6e-36 157.5 170 54.7
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 6.2e-34 151.4 173 50.9
unitig_37.g12720 Utricularia gibba HOM05D001674 ORTHO05D008599 1.4e-33 150.2 266 37.6
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.2e-32 147.1 154 60.4
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.3e-31 143.7 1254 24.0
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.0e-28 134.0 167 50.3
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.5e-27 130.2 280 35.4
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 1.5e-24 120.2 264 31.1
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 4.4e-24 118.6 243 34.6
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-21 108.6 106 54.7
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 6.6e-20 104.8 163 45.4
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 1.1e-19 104.0 279 27.2
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.6e-19 101.7 174 39.1
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 1.3e-15 90.5 113 48.7
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 2.7e-13 82.8 58 69.0
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-12 79.3 61 54.1
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 6.6e-12 78.2 148 44.6
Actinidia09210 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.7e-07 63.5 196 31.6


User provided reference genes

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