Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 7.1e-56 220.7 141 100.0
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 4.6e-55 218.0 139 100.0
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 1.3e-54 216.5 139 99.3
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 1.0e-41 173.7 141 80.9
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 2.7e-39 165.6 138 78.3
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 7.9e-39 164.1 134 78.4
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 7.4e-37 157.5 135 77.0
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 4.8e-36 154.8 132 76.5
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 6.3e-36 154.5 141 72.3
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 1.4e-35 153.3 137 74.5
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 1.4e-35 153.3 137 74.5
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.4e-35 153.3 140 72.1
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 3.1e-35 152.1 141 71.6
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 6.9e-35 151.0 141 68.8
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 2.0e-34 149.4 140 71.4
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 3.4e-34 148.7 141 67.4
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 3.4e-34 148.7 138 61.6
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 5.9e-34 147.9 138 70.3
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 5.9e-34 147.9 133 71.4
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 1.0e-33 147.1 141 69.5
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.7e-33 146.4 138 71.7
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.7e-33 146.4 138 71.7
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 5.0e-33 144.8 141 70.2
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 5.0e-33 144.8 134 50.0
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 6.5e-33 144.4 141 70.9
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 8.5e-33 144.1 140 69.3
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.1e-32 143.7 140 70.7
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 1.4e-32 143.3 133 72.2
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 3.2e-32 142.1 137 70.1
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 4.2e-32 141.7 141 68.8
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 4.2e-32 141.7 137 70.8
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 4.2e-32 141.7 137 71.5
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 5.5e-32 141.4 141 68.1
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 7.2e-32 141.0 132 72.7
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 2.1e-31 139.4 138 69.6
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 2.1e-31 139.4 138 68.8
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 2.7e-31 139.0 138 67.4
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 2.7e-31 139.0 140 52.9
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 2.7e-31 139.0 134 72.4
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 3.6e-31 138.7 134 73.1
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 4.6e-31 138.3 139 64.7
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 4.6e-31 138.3 141 66.7
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 4.6e-31 138.3 140 67.9
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 7.9e-31 137.5 132 72.0
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 1.0e-30 137.1 141 67.4
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 1.3e-30 136.7 140 67.1
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 2.3e-30 136.0 133 66.9
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 3.0e-30 135.6 139 64.0
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 3.0e-30 135.6 139 66.9
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 3.9e-30 135.2 137 61.3
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 3.9e-30 135.2 139 66.2
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 8.7e-30 134.0 141 69.5
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 8.7e-30 134.0 133 58.6
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 1.1e-29 133.7 127 73.2
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 1.5e-29 133.3 137 68.6
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 1.9e-29 132.9 130 60.8
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.9e-29 132.9 134 70.9
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 1.9e-29 132.9 139 67.6
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 5.7e-29 131.3 139 64.7
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 5.7e-29 131.3 134 69.4
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 5.7e-29 131.3 134 67.9
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 9.7e-29 130.6 139 65.5
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 1.6e-28 129.8 131 63.4
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 2.2e-28 129.4 138 63.0
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 2.2e-28 129.4 139 63.3
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 2.8e-28 129.0 134 68.7
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 2.8e-28 129.0 139 64.7
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 6.3e-28 127.9 88 65.9
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 2.4e-27 125.9 138 63.0
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 4.1e-27 125.2 124 48.4
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 6.9e-27 124.4 129 68.2
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 1.5e-26 123.2 138 63.0
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 3.4e-26 122.1 138 61.6
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 3.4e-26 122.1 138 61.6
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 1.0e-25 120.6 138 60.9
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 1.0e-25 120.6 137 55.5
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 2.2e-25 119.4 122 70.5
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 2.9e-25 119.0 127 63.8
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 3.8e-25 118.6 123 68.3
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 5.0e-25 118.2 138 60.1
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 8.5e-25 117.5 79 68.4
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 1.1e-24 117.1 132 55.3
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 1.4e-24 116.7 139 64.7
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 1.4e-24 116.7 138 59.4
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 1.9e-24 116.3 90 57.8
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 4.2e-24 115.2 120 71.7
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 7.2e-24 114.4 119 67.2
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 9.4e-24 114.0 84 56.0
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 9.4e-24 114.0 138 58.0
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 2.7e-23 112.5 137 38.7
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 7.9e-23 110.9 140 40.0
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 1.0e-22 110.5 140 57.9
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 8.8e-22 107.5 135 59.3
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 1.1e-21 107.1 135 58.5
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 1.5e-21 106.7 135 58.5
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 3.3e-21 105.5 128 60.2
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 4.4e-21 105.1 116 67.2
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 4.4e-21 105.1 126 61.1
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 4.8e-20 101.7 137 54.7
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 4.8e-20 101.7 135 57.0
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 1.1e-19 100.5 111 46.8
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 3.1e-19 99.0 78 50.0
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 4.1e-19 98.6 119 57.1
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 1.2e-18 97.1 117 60.7
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 1.2e-18 97.1 121 56.2
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 1.5e-18 96.7 128 56.2
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 1.5e-18 96.7 128 60.2
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 1.5e-18 96.7 128 60.2
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 2.6e-18 95.9 132 43.9
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 3.8e-17 92.0 101 72.3
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 1.1e-16 90.5 131 51.9
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 3.2e-16 89.0 136 56.6
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 1.0e-14 84.0 128 52.3
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 1.4e-14 83.6 96 59.4
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 1.8e-14 83.2 118 48.3
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 1.8e-14 83.2 122 36.9
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 3.3e-13 79.0 119 35.3
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 3.3e-13 79.0 119 35.3
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 3.3e-13 79.0 119 35.3
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 5.7e-13 78.2 69 52.2
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 7.4e-13 77.8 119 34.5
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 7.4e-13 77.8 119 34.5
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 7.4e-13 77.8 126 48.4
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 9.7e-13 77.4 123 33.3
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 4.1e-11 72.0 59 57.6
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 1.2e-10 70.5 142 33.8
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 1.3e-09 67.0 140 40.0
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 2.2e-09 66.2 94 51.1
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.9e-08 63.2 105 29.5
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 2.1e-07 59.7 73 39.7
SGA_v2.0_scaffold130G34329 Striga asiatica HOM05D001969 ORTHO05D009003 6.7e-06 54.7 33 75.8


User provided reference genes

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