Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2289 Salvia bowleyana HOM05D003792 ORTHO05D003195 3.2e-119 431.8 220 100.0
MSTRG.25091 Avicennia marina HOM05D003792 ORTHO05D003195 3.2e-39 166.0 220 48.6
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 6.5e-32 141.7 226 42.0
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 2.1e-30 136.7 189 49.2
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 3.4e-28 129.4 201 42.8
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 3.8e-24 115.9 197 39.1
Migut.C00575 Erythranthe guttata HOM05D003792 ORTHO05D003195 3.3e-23 112.8 201 43.8
Oeu049982.1 Olea europaea HOM05D003792 ORTHO05D003195 1.6e-22 110.5 167 41.9
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 2.8e-22 109.8 213 34.3
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 2.8e-22 109.8 223 36.8
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 2.3e-21 106.7 125 45.6
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 5.2e-21 105.5 213 34.7
Actinidia38059 Actinidia chinensis HOM05D004168 ORTHO05D004999 4.4e-20 102.4 204 36.8
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 4.4e-20 102.4 188 37.8
Sc02g0007160 Simmondsia chinensis HOM05D003792 ORTHO05D003195 9.8e-20 101.3 210 36.7
ECA246G0047 Erigeron canadensis HOM05D003792 ORTHO05D003195 1.3e-19 100.9 177 37.9
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 1.7e-19 100.5 188 36.2
Lsat_1_v5_gn_4_125741 Lactuca sativa HOM05D003792 ORTHO05D003195 1.7e-19 100.5 191 37.2
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 2.2e-19 100.1 187 36.4
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 2.9e-19 99.8 203 33.5
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 8.3e-19 98.2 240 31.7
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 1.8e-18 97.1 183 36.6
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 2.4e-18 96.7 222 36.0
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 2.4e-18 96.7 178 37.6
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 2.4e-18 96.7 201 36.3
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 4.1e-18 95.9 192 35.4
Peaxi162Scf00252g00410 Petunia axillaris HOM05D003792 ORTHO05D003195 4.1e-18 95.9 188 34.6
PGSC0003DMG402007970 Solanum tuberosum HOM05D003792 ORTHO05D003195 4.1e-18 95.9 177 32.8
Ah.11g043080 Amaranthus hybridus HOM05D003792 ORTHO05D003195 5.4e-18 95.5 116 43.1
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 5.4e-18 95.5 182 34.6
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 7.0e-18 95.1 181 35.9
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 1.2e-17 94.4 207 34.8
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 1.2e-17 94.4 225 35.1
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 1.6e-17 94.0 182 31.9
Sopen04g032480 Solanum pennellii HOM05D003792 ORTHO05D003195 3.5e-17 92.8 189 31.7
Cc10_g04110 Coffea canephora HOM05D003792 ORTHO05D003195 5.9e-17 92.0 179 36.9
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 7.8e-17 91.7 181 33.1
Rhsim07G0228200 Rhododendron simsii HOM05D003792 ORTHO05D003195 7.8e-17 91.7 125 38.4
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 1.0e-16 91.3 219 32.0
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 3.9e-16 89.4 203 32.5
Solyc04g078880.3 Solanum lycopersicum HOM05D003792 ORTHO05D003195 3.9e-16 89.4 186 32.8
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 5.0e-16 89.0 200 34.5
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.1e-15 87.8 207 32.4
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 1.5e-15 87.4 204 30.4
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.5e-15 87.4 223 30.9
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 1.5e-15 87.4 184 35.9
GSVIVG01024176001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.5e-15 87.4 123 41.5
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.9e-15 87.0 155 35.5
ECA232G3551 Erigeron canadensis HOM05D003792 ORTHO05D003195 3.3e-15 86.3 208 33.7
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 3.3e-15 86.3 174 33.3
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.3e-15 86.3 171 35.1
Thhalv10003264m.g Eutrema salsugineum HOM05D003792 ORTHO05D003195 4.3e-15 85.9 128 41.4
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 4.3e-15 85.9 165 36.4
Lsat_1_v5_gn_6_111920 Lactuca sativa HOM05D003792 ORTHO05D003195 5.6e-15 85.5 171 35.7
Lalb_Chr22g0355111 Lupinus albus HOM05D003792 ORTHO05D003195 5.6e-15 85.5 198 32.8
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 5.6e-15 85.5 124 39.5
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 5.6e-15 85.5 124 39.5
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 5.6e-15 85.5 102 39.2
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 7.3e-15 85.1 177 34.5
SGA_v2.0_scaffold28G11774 Striga asiatica HOM05D000207 ORTHO05D000606 7.3e-15 85.1 195 35.9
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 9.5e-15 84.7 155 34.8
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 1.2e-14 84.3 188 33.0
Sed0003020 Sechium edule HOM05D003792 ORTHO05D003195 1.6e-14 84.0 182 34.1
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 2.1e-14 83.6 214 31.3
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 2.8e-14 83.2 202 33.2
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.8e-14 83.2 165 35.2
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 3.6e-14 82.8 180 31.7
Hund23000 Selenicereus undatus HOM05D003792 ORTHO05D003195 3.6e-14 82.8 115 39.1
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 3.6e-14 82.8 116 37.1
Carub.0008s0601 Capsella rubella HOM05D003792 ORTHO05D003195 4.7e-14 82.4 204 32.4
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 4.7e-14 82.4 199 30.7
THA.LOC104812575 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 4.7e-14 82.4 222 31.1
THA.LOC104822850 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 4.7e-14 82.4 194 32.0
HanXRQChr05g0150801 Helianthus annuus HOM05D003792 ORTHO05D003195 6.2e-14 82.0 170 35.3
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 8.0e-14 81.6 178 34.3
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 1.0e-13 81.3 215 33.5
MELO3C016754.2 Cucumis melo HOM05D003792 ORTHO05D003195 1.0e-13 81.3 168 33.3
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 1.4e-13 80.9 237 32.1
Gohir.D01G108300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.4e-13 80.9 157 35.0
Gorai.002G132500 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.4e-13 80.9 149 36.2
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 1.4e-13 80.9 195 30.8
CsaV3_4G034340 Cucumis sativus L. HOM05D003792 ORTHO05D003195 1.8e-13 80.5 193 32.1
Phvul.001G022200 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 1.8e-13 80.5 188 36.2
TPR.G3791 Trifolium pratense HOM05D003792 ORTHO05D003195 1.8e-13 80.5 171 36.8
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.3e-13 80.1 155 34.2
Lj5g0016368 Lotus japonicus HOM05D003792 ORTHO05D003195 2.3e-13 80.1 187 32.6
Medtr1g019360 Medicago truncatula HOM05D003792 ORTHO05D003195 2.3e-13 80.1 163 35.0
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 2.3e-13 80.1 236 28.8
Lalb_Chr14g0368651 Lupinus albus HOM05D003792 ORTHO05D003195 3.1e-13 79.7 208 28.8
Sabra02G0098600 Salix brachista HOM05D000207 ORTHO05D003195 4.0e-13 79.3 131 39.7
EL10As7g23733 Beta vulgaris HOM05D003792 ORTHO05D003195 6.8e-13 78.6 124 33.9
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 6.8e-13 78.6 117 43.6
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 8.9e-13 78.2 191 32.5
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 8.9e-13 78.2 191 32.5
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 8.9e-13 78.2 203 31.5
Sc15g0006120 Simmondsia chinensis HOM05D004168 ORTHO05D003195 8.9e-13 78.2 185 37.3
Gohir.A01G120000 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.5e-12 77.4 163 33.1
BcaC02g10794 Brassica carinata HOM05D003792 ORTHO05D003195 3.4e-12 76.3 125 37.6
C04p25040 Brassica napus HOM05D003792 ORTHO05D003195 3.4e-12 76.3 125 37.6
BolC4t24005H Brassica oleracea HOM05D003792 ORTHO05D003195 3.4e-12 76.3 125 37.6
A06p48190 Brassica napus HOM05D003792 ORTHO05D003195 4.4e-12 75.9 133 37.6
BraA06t27688Z Brassica rapa HOM05D003792 ORTHO05D003195 4.4e-12 75.9 133 37.6
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 4.4e-12 75.9 106 35.8
BcaB07g31033 Brassica carinata HOM05D003792 ORTHO05D003195 5.8e-12 75.5 197 33.5
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 7.5e-12 75.1 197 29.4
Psat6g012520 Pisum sativum HOM05D003792 ORTHO05D003195 9.8e-12 74.7 168 31.0
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 1.3e-11 74.3 175 31.4
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 1.7e-11 73.9 193 32.1
PGR083G2840 Punica granatum HOM05D003792 ORTHO05D003195 2.2e-11 73.6 112 39.3
Ciclev10002531m.g Citrus clementina HOM05D003792 ORTHO05D003195 2.9e-11 73.2 161 31.7
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 6.4e-11 72.0 201 31.8
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 1.4e-10 70.9 188 34.0
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.4e-10 70.9 171 32.2
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.9e-10 70.5 182 30.2
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 4.1e-10 69.3 192 29.7
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 5.4e-10 68.9 148 29.7
SGA_v2.0_scaffold14G07003 Striga asiatica HOM05D000207 ORTHO05D000606 5.4e-10 68.9 75 50.7
HanXRQChr14g0439641 Helianthus annuus HOM05D003792 ORTHO05D003195 7.8e-09 65.1 186 30.1
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 1.0e-08 64.7 234 25.2
MBI03_g13463_MAGBIO Magnolia biondii HOM05D003792 ORTHO05D003195 1.0e-08 64.7 181 34.3
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 1.3e-08 64.3 186 30.1
Haze_17521 Corylus avellana HOM05D000207 ORTHO05D000606 1.7e-08 63.9 190 33.2
Zm00001eb006310 Zea mays HOM05D003792 ORTHO05D003195 3.9e-08 62.8 174 31.6
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 5.0e-08 62.4 186 26.3
AUR62042730 Chenopodium quinoa HOM05D043499 ORTHO05D003195 5.0e-08 62.4 199 27.6
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 8.6e-08 61.6 138 32.6
A09p20080 Brassica napus HOM05D003792 ORTHO05D003195 1.5e-07 60.8 207 30.0
BraA09t37621Z Brassica rapa HOM05D003792 ORTHO05D003195 1.5e-07 60.8 207 30.0
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 1.5e-07 60.8 188 25.5
vmacro04447 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.5e-07 60.8 138 34.8
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 1.9e-07 60.5 124 33.9
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 4.3e-07 59.3 181 29.3
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 5.6e-07 58.9 97 30.9
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.6e-06 57.4 75 40.0
BcaC04g21959 Brassica carinata HOM05D003792 ORTHO05D003195 2.1e-06 57.0 51 52.9
THA.LOC104814167 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 2.1e-06 57.0 212 31.1
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 3.6e-06 56.2 200 27.5
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 6.2e-06 55.5 205 25.9
C09p25480 Brassica napus HOM05D003792 ORTHO05D003195 8.1e-06 55.1 46 54.3
CDE08G1351 Ceratophyllum demersum HOM05D003792 ORTHO05D003195 8.1e-06 55.1 90 34.4


User provided reference genes

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