Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1851 Salvia bowleyana HOM05D008726 ORTHO05D003723 1.7e-176 622.5 297 100.0
SalBow6G4675 Salvia bowleyana HOM05D003151 ORTHO05D003723 9.5e-26 121.7 236 38.1
SalBow7G2940 Salvia bowleyana HOM05D008726 ORTHO05D350675 2.3e-16 90.5 62 79.0
SalBow3G2988 Salvia bowleyana HOM05D008726 ORTHO05D358580 5.8e-15 85.9 112 50.9
SalBow1G3802 Salvia bowleyana HOM05D008726 ORTHO05D363083 7.5e-15 85.5 112 50.9
SalBow7G0118 Salvia bowleyana HOM05D008726 ORTHO05D362361 7.5e-15 85.5 112 50.9
SalBow8G2248 Salvia bowleyana HOM05D008726 ORTHO05D354177 9.8e-15 85.1 118 49.2
SalBow8G4970 Salvia bowleyana HOM05D008726 ORTHO05D360550 9.8e-15 85.1 118 49.2
SalBow7G2499 Salvia bowleyana HOM05D008726 ORTHO05D354053 2.2e-14 84.0 112 50.0
Nitab4.5_0008958g0010 Nicotiana tabacum HOM05D003151 ORTHO05D003723 4.9e-14 82.8 118 42.4
Peaxi162Scf00354g00026 Petunia axillaris HOM05D003151 ORTHO05D003723 6.4e-14 82.4 136 39.0
SalBow3G0363 Salvia bowleyana HOM05D008726 ORTHO05D354882 1.1e-13 81.6 79 62.0
SalBow3G1509 Salvia bowleyana HOM05D008726 ORTHO05D357121 2.4e-13 80.5 79 60.8
Cc06_g11280 Coffea canephora HOM05D003151 ORTHO05D003723 4.1e-13 79.7 103 47.6
Nitab4.5_0006935g0010 Nicotiana tabacum HOM05D003151 ORTHO05D003723 5.4e-13 79.3 102 46.1
Nitab4.5_0010222g0030 Nicotiana tabacum HOM05D003151 ORTHO05D003723 5.4e-13 79.3 102 46.1
SalBow3G1171 Salvia bowleyana HOM05D008726 ORTHO05D363760 7.0e-13 79.0 83 57.8
SalBow4G3057 Salvia bowleyana HOM05D008726 ORTHO05D363091 7.0e-13 79.0 83 57.8
SalBow5G2205 Salvia bowleyana HOM05D008726 ORTHO05D351125 7.0e-13 79.0 83 57.8
SalBow6G1270 Salvia bowleyana HOM05D008726 ORTHO05D352376 7.0e-13 79.0 83 57.8
PGSC0003DMG400007756 Solanum tuberosum HOM05D003151 ORTHO05D003723 7.0e-13 79.0 97 45.4
MSTRG.19521 Avicennia marina HOM05D003151 ORTHO05D003723 9.2e-13 78.6 67 62.7
SalBow8G1505 Salvia bowleyana HOM05D008726 ORTHO05D357190 9.2e-13 78.6 83 57.8
Solyc07g021750.1 Solanum lycopersicum HOM05D003151 ORTHO05D003723 9.2e-13 78.6 98 46.9
Sopen07g011620 Solanum pennellii HOM05D003151 ORTHO05D003723 9.2e-13 78.6 98 46.9
MSTRG.17772 Avicennia marina HOM05D003151 ORTHO05D003723 6.0e-12 75.9 98 48.0
SalBow1G8702 Salvia bowleyana HOM05D008726 ORTHO05D355440 7.8e-12 75.5 83 56.6
SalBow3G3575 Salvia bowleyana HOM05D001787 ORTHO05D007379 1.0e-11 75.1 69 59.4
Migut.J00599 Erythranthe guttata HOM05D003151 ORTHO05D003723 1.3e-11 74.7 97 45.4
SalBow1G5151 Salvia bowleyana HOM05D025718 ORTHO05D362513 1.3e-11 74.7 48 79.2
SalBow5G2622 Salvia bowleyana HOM05D008726 ORTHO05D360805 1.3e-11 74.7 83 56.6
SalBow1G6697 Salvia bowleyana HOM05D008726 ORTHO05D352045 2.3e-11 73.9 75 57.3
CAN.G771.2 Capsicum annuum HOM05D003151 ORTHO05D003723 3.0e-11 73.6 100 46.0
SalBow1G6062 Salvia bowleyana HOM05D008726 ORTHO05D355755 3.0e-11 73.6 82 56.1
SalBow5G4294 Salvia bowleyana HOM05D008726 ORTHO05D353963 5.0e-11 72.8 91 50.5
Sc08g0008410 Simmondsia chinensis HOM05D003151 ORTHO05D003723 1.9e-10 70.9 102 40.2
Oeu006976.1 Olea europaea HOM05D003151 ORTHO05D003723 2.5e-10 70.5 98 41.8
SGA_v2.0_scaffold62G21599 Striga asiatica HOM05D003151 ORTHO05D003723 4.3e-10 69.7 101 41.6
MSTRG.6051 Avicennia marina HOM05D003151 ORTHO05D003723 7.3e-10 68.9 88 50.0
BcaB03g16745 Brassica carinata HOM05D003151 ORTHO05D003723 7.3e-10 68.9 162 37.7
A07p01170 Brassica napus HOM05D003151 ORTHO05D003723 7.3e-10 68.9 164 37.2
SalBow2G1431 Salvia bowleyana HOM05D008726 ORTHO05D357065 7.3e-10 68.9 63 61.9
DCAR_024687 Daucus carota HOM05D003151 ORTHO05D003723 9.5e-10 68.6 146 32.9
Lalb_Chr05g0223631 Lupinus albus HOM05D003151 ORTHO05D003723 9.5e-10 68.6 101 42.6
Glyma.05G222300 Glycine max HOM05D003151 ORTHO05D003723 1.2e-09 68.2 102 43.1
BcaC06g36600 Brassica carinata HOM05D003151 ORTHO05D003723 1.6e-09 67.8 164 37.2
C07p02310 Brassica napus HOM05D003151 ORTHO05D003723 1.6e-09 67.8 164 37.2
BolC7t40640H Brassica oleracea HOM05D003151 ORTHO05D003723 1.6e-09 67.8 164 37.2
CAN.G371.125 Capsicum annuum HOM05D003151 ORTHO05D003723 1.6e-09 67.8 140 37.9
Dinv36756 Davidia involucrata HOM05D003151 ORTHO05D003723 1.6e-09 67.8 103 42.7
HanXRQChr10g0319261 Helianthus annuus HOM05D003151 ORTHO05D003723 1.6e-09 67.8 98 42.9
Duzib168G0375 Durio zibethinus HOM05D003151 ORTHO05D003723 2.1e-09 67.4 102 42.2
Lsat_1_v5_gn_7_37501 Lactuca sativa HOM05D003151 ORTHO05D003723 2.1e-09 67.4 98 41.8
unitig_27.g24726 Utricularia gibba HOM05D003151 ORTHO05D003723 2.1e-09 67.4 101 40.6
Aqoxy7G01240 Aquilegia oxysepala HOM05D003151 ORTHO05D003723 2.8e-09 67.0 100 42.0
CARHR110010 Cardamine hirsuta HOM05D003151 ORTHO05D003723 2.8e-09 67.0 138 40.6
ECA234G2307 Erigeron canadensis HOM05D003151 ORTHO05D003723 2.8e-09 67.0 97 41.2
Lsat_1_v5_gn_5_145481 Lactuca sativa HOM05D003151 ORTHO05D003723 2.8e-09 67.0 93 44.1
Sabra18G0058900 Salix brachista HOM05D003151 ORTHO05D003723 2.8e-09 67.0 101 42.6
SabraUnG0005300 Salix brachista HOM05D003151 ORTHO05D003723 2.8e-09 67.0 101 42.6
BcaC06g36599 Brassica carinata HOM05D003151 ORTHO05D003723 4.7e-09 66.2 121 41.3
Glyma.08G029000 Glycine max HOM05D003151 ORTHO05D003723 4.7e-09 66.2 105 40.0
Rhsim03G0233200 Rhododendron simsii HOM05D003151 ORTHO05D003723 4.7e-09 66.2 98 42.9
Thecc.09G091100 Theobroma cacao HOM05D003151 ORTHO05D003723 4.7e-09 66.2 102 41.2
Cfa003099 Carpinus fangiana HOM05D003151 ORTHO05D003723 6.2e-09 65.9 101 42.6
ClCG03G015690 Citrullus lanatus HOM05D003151 ORTHO05D003723 8.0e-09 65.5 126 34.1
Haze_25901 Corylus avellana HOM05D003151 ORTHO05D003723 8.0e-09 65.5 101 42.6
Thhalv10023108m.g Eutrema salsugineum HOM05D003151 ORTHO05D003723 8.0e-09 65.5 125 39.2
CSS0011012 Camellia sinensis var. sinensis HOM05D003151 ORTHO05D003723 1.1e-08 65.1 103 40.8
Sabra06G0119300 Salix brachista HOM05D003151 ORTHO05D003723 1.1e-08 65.1 104 41.3
Actinidia25258 Actinidia chinensis HOM05D003151 ORTHO05D003723 1.4e-08 64.7 102 40.2
TAR626G1007 Trochodendron aralioides HOM05D003151 ORTHO05D003723 1.4e-08 64.7 103 38.8
Carub.0003s3386 Capsella rubella HOM05D003151 ORTHO05D003723 1.8e-08 64.3 120 40.8
MD15G1205500 Malus domestica HOM05D003151 ORTHO05D003723 1.8e-08 64.3 105 39.0
Oeu034043.1 Olea europaea HOM05D003151 ORTHO05D003723 1.8e-08 64.3 102 38.2
TAR383G0148 Trochodendron aralioides HOM05D003151 ORTHO05D003723 1.8e-08 64.3 124 36.3
AT2G19570 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 2.3e-08 63.9 124 39.5
Potri.006G150600 Populus trichocarpa HOM05D003151 ORTHO05D003723 2.3e-08 63.9 104 41.3
Sp3g32950 Schrenkiella parvula HOM05D003151 ORTHO05D003723 2.3e-08 63.9 165 35.2
PSO063G1447 Papaver somniferum HOM05D003151 ORTHO05D003723 3.1e-08 63.5 102 38.2
CSS0013498 Camellia sinensis var. sinensis HOM05D003151 ORTHO05D003723 4.0e-08 63.2 103 39.8
Gorai.013G228000 Gossypium raimondii HOM05D003151 ORTHO05D003723 4.0e-08 63.2 99 42.4
Potri.018G066400 Populus trichocarpa HOM05D003151 ORTHO05D003723 4.0e-08 63.2 100 41.0
GSVIVG01015216001 Vitis vinifera HOM05D003151 ORTHO05D003723 4.0e-08 63.2 121 35.5
MD02G1076800 Malus domestica HOM05D003151 ORTHO05D003723 5.2e-08 62.8 105 39.0
Nn8g38896 Nelumbo nucifera HOM05D003151 ORTHO05D003723 5.2e-08 62.8 101 41.6
CDE05G0195 Ceratophyllum demersum HOM05D003151 ORTHO05D003723 6.8e-08 62.4 100 39.0
Aa31LG2G20920 Aethionema arabicum HOM05D003151 ORTHO05D003723 8.9e-08 62.0 163 34.4
AL3G48670 Arabidopsis lyrata HOM05D003151 ORTHO05D003723 8.9e-08 62.0 121 38.8
Gohir.A13G193500 Gossypium hirsutum HOM05D003151 ORTHO05D003723 8.9e-08 62.0 99 41.4
Duzib187G1696 Durio zibethinus HOM05D003151 ORTHO05D003723 1.2e-07 61.6 103 39.8
Phvul.002G304000 Phaseolus vulgaris HOM05D003151 ORTHO05D003723 1.2e-07 61.6 99 41.4
Lj2g0012329 Lotus japonicus HOM05D003151 ORTHO05D003723 1.5e-07 61.2 99 39.4
Manes.05G000800 Manihot esculenta HOM05D003151 ORTHO05D003723 1.5e-07 61.2 98 44.9
SEGI_35809 Sequoiadendron giganteum HOM05D003151 ORTHO05D003723 1.5e-07 61.2 97 37.1
vmacro06284 Vaccinium macrocarpon HOM05D003151 ORTHO05D003723 1.5e-07 61.2 104 38.5
PSO832G3392 Papaver somniferum HOM05D003151 ORTHO05D003723 2.0e-07 60.8 101 37.6
Sp7g27430 Schrenkiella parvula HOM05D003151 ORTHO05D003723 2.0e-07 60.8 116 39.7
C07p57040 Brassica napus HOM05D003151 ORTHO05D003723 2.6e-07 60.5 141 33.3
MELO3C015459.2 Cucumis melo HOM05D003151 ORTHO05D003723 2.6e-07 60.5 98 36.7
CsaV3_1G040320 Cucumis sativus L. HOM05D003151 ORTHO05D003723 2.6e-07 60.5 98 36.7
Glyma.07G129300 Glycine max HOM05D003151 ORTHO05D003723 2.6e-07 60.5 90 42.2
Gohir.A08G245300 Gossypium hirsutum HOM05D003151 ORTHO05D003723 2.6e-07 60.5 95 42.1
Gohir.D08G266301 Gossypium hirsutum HOM05D003151 ORTHO05D003723 2.6e-07 60.5 95 42.1
Gohir.D13G199300 Gossypium hirsutum HOM05D003151 ORTHO05D003723 2.6e-07 60.5 99 41.4
Gorai.004G284000 Gossypium raimondii HOM05D003151 ORTHO05D003723 2.6e-07 60.5 95 42.1
QL02p062866 Quercus lobata HOM05D003151 ORTHO05D003723 2.6e-07 60.5 98 39.8
A03p59000 Brassica napus HOM05D003151 ORTHO05D003723 3.4e-07 60.1 98 40.8
THA.LOC104801882 Tarenaya hassleriana HOM05D003151 ORTHO05D003723 3.4e-07 60.1 100 40.0
Aa31LG8G16580 Aethionema arabicum HOM05D003151 ORTHO05D003723 4.4e-07 59.7 119 37.0
BcaNung00481 Brassica carinata HOM05D003151 ORTHO05D003723 4.4e-07 59.7 98 39.8
BolC7t46173H Brassica oleracea HOM05D003151 ORTHO05D003723 4.4e-07 59.7 141 33.3
AT4G29610 Arabidopsis thaliana HOM05D003151 ORTHO05D003723 5.8e-07 59.3 175 29.7
CARHR237490 Cardamine hirsuta HOM05D003151 ORTHO05D003723 5.8e-07 59.3 99 40.4
Medtr8g101570 Medicago truncatula HOM05D003151 ORTHO05D003723 5.8e-07 59.3 99 38.4
Atru.chr7.1575 Acer truncatum HOM05D003151 ORTHO05D003723 7.5e-07 58.9 68 51.5
BraA03t14959Z Brassica rapa HOM05D003151 ORTHO05D003723 9.8e-07 58.5 98 39.8
Prupe.7G211600 Prunus persica HOM05D003151 ORTHO05D003723 9.8e-07 58.5 102 35.3
AagrBONN_evm.TU.Sc2ySwM_368.3134 Anthoceros agrestis HOM05D003151 ORTHO05D003723 1.3e-06 58.2 91 38.5
Dinv42311 Davidia involucrata HOM05D003151 ORTHO05D003723 1.3e-06 58.2 94 43.6
Psat7g020200 Pisum sativum HOM05D003151 ORTHO05D003723 1.3e-06 58.2 98 37.8
PGR142G4167 Punica granatum HOM05D003151 ORTHO05D003723 1.3e-06 58.2 97 38.1
SalBow7G3193 Salvia bowleyana HOM05D008726 ORTHO05D355767 1.3e-06 58.2 62 56.5
SMO367G0845 Selaginella moellendorffii HOM05D003151 ORTHO05D003723 1.3e-06 58.2 95 38.9
SalBow3G4152 Salvia bowleyana HOM05D008726 ORTHO05D361208 2.2e-06 57.4 68 52.9
SalBow5G4340 Salvia bowleyana HOM05D008726 ORTHO05D356927 2.2e-06 57.4 33 84.8
SalBow6G4909 Salvia bowleyana HOM05D008726 ORTHO05D361303 2.2e-06 57.4 46 73.9
Eucgr.C00902 Eucalyptus grandis HOM05D003151 ORTHO05D003723 2.9e-06 57.0 101 41.6
FvH4_1g07230 Fragaria vesca HOM05D003151 ORTHO05D003723 2.9e-06 57.0 98 35.7
SalBow7G1443 Salvia bowleyana HOM05D008726 ORTHO05D353506 3.7e-06 56.6 69 46.4
EL10Ac8g19236 Beta vulgaris HOM05D003151 ORTHO05D003723 4.9e-06 56.2 72 43.1
Lj4g0006501 Lotus japonicus HOM05D003151 ORTHO05D003723 4.9e-06 56.2 100 39.0
Peaxi162Scf01318g00001 Petunia axillaris HOM05D003151 ORTHO05D003723 4.9e-06 56.2 138 34.1
TPR.G25452 Trifolium pratense HOM05D003151 ORTHO05D003723 4.9e-06 56.2 99 37.4
CANSAT56G1065 Cannabis sativa HOM05D003151 ORTHO05D003723 6.4e-06 55.8 97 35.1
CANSAT56G2773 Cannabis sativa HOM05D003151 ORTHO05D003723 6.4e-06 55.8 97 35.1
SalBow5G3141 Salvia bowleyana HOM05D008726 ORTHO05D355847 6.4e-06 55.8 33 84.8
FAN28G1682 Fragaria x ananassa HOM05D003151 ORTHO05D003723 8.3e-06 55.5 91 38.5


User provided reference genes

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