Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 5.9e-135 484.2 242 100.0
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 1.6e-124 449.5 242 89.7
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 2.6e-122 442.2 242 88.8
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 5.6e-117 424.5 272 80.1
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 6.4e-113 411.0 242 83.5
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 1.1e-112 410.2 242 82.6
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 4.6e-111 404.8 239 80.8
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.8e-111 404.1 242 81.0
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.7e-110 402.9 236 80.5
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.9e-110 401.7 242 80.6
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 6.6e-110 401.0 247 78.5
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.1e-109 400.2 237 80.6
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 3.3e-109 398.7 232 84.5
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 4.3e-109 398.3 242 79.8
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 5.6e-109 397.9 232 84.1
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 5.6e-109 397.9 232 83.6
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 9.5e-109 397.1 240 80.8
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.6e-108 395.2 240 80.4
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 6.2e-108 394.4 244 79.1
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.3e-107 392.5 241 80.1
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 3.1e-107 392.1 237 79.3
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 5.2e-107 391.3 232 81.5
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 5.2e-107 391.3 232 81.5
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 6.8e-107 391.0 236 77.5
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 6.8e-107 391.0 234 80.8
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 8.9e-107 390.6 238 81.1
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 1.2e-106 390.2 235 80.0
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.2e-106 390.2 233 81.1
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.5e-106 389.8 237 79.3
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.6e-106 389.0 238 80.3
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 1.3e-105 386.7 252 77.0
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 2.2e-105 386.0 238 79.4
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 2.9e-105 385.6 237 77.2
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 3.7e-105 385.2 228 82.0
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 3.7e-105 385.2 242 79.8
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 6.4e-105 384.4 232 80.6
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.9e-104 382.9 239 77.8
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 2.4e-104 382.5 235 77.9
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 3.2e-104 382.1 237 78.9
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 4.1e-104 381.7 237 78.1
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 5.4e-104 381.3 232 79.3
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 5.4e-104 381.3 237 77.2
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 7.1e-104 380.9 232 78.0
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 2.1e-103 379.4 232 77.6
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 2.7e-103 379.0 242 76.4
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 3.5e-103 378.6 235 77.4
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 4.6e-103 378.3 232 79.7
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.3e-102 376.7 232 76.7
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.7e-102 376.3 236 75.8
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 2.3e-102 375.9 232 77.2
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 3.9e-102 375.2 235 75.7
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 6.6e-102 374.4 232 76.7
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 6.6e-102 374.4 252 74.2
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 8.6e-102 374.0 256 72.3
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 1.1e-101 373.6 235 75.3
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.5e-101 373.2 232 75.9
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.5e-101 373.2 232 77.2
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.9e-101 372.9 230 77.0
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 1.2e-100 370.2 232 75.9
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 2.1e-100 369.4 232 75.4
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 2.1e-100 369.4 232 75.4
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 2.1e-100 369.4 232 75.4
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 4.7e-100 368.2 243 74.9
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.7e-100 368.2 239 74.1
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.7e-100 368.2 239 74.1
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 4.7e-100 368.2 237 73.8
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 2.3e-99 365.9 241 70.5
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.3e-99 365.9 239 73.6
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 4.0e-99 365.2 235 73.6
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 2.0e-98 362.8 223 77.6
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.3e-97 360.1 229 74.2
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 2.9e-97 359.0 229 74.2
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 4.9e-97 358.2 241 70.5
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.4e-96 356.7 234 70.9
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.1e-96 355.1 239 75.7
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.0e-95 351.3 237 70.9
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 1.0e-94 350.5 227 73.1
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.7e-94 349.7 232 74.6
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 6.6e-94 347.8 242 72.3
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 8.6e-94 347.4 242 70.2
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.9e-93 346.3 242 69.0
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.5e-93 345.9 242 69.8
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.6e-92 342.0 260 65.8
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 1.8e-91 339.7 278 63.3
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.4e-90 335.5 207 79.7
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 5.8e-90 334.7 264 64.4
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.7e-89 333.2 238 69.3
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.2e-89 332.8 201 81.1
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.9e-88 329.7 273 61.9
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.0e-83 312.0 266 62.0
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 4.0e-83 312.0 196 80.6
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 6.9e-83 311.2 239 62.8
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 8.4e-81 304.3 226 63.3
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 5.4e-80 301.6 235 67.2
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 2.1e-79 299.7 196 74.0
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.9e-78 295.4 191 73.8
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 6.6e-78 294.7 205 71.7
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 3.3e-77 292.4 230 64.3
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 4.9e-73 278.5 297 52.5
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 2.4e-72 276.2 151 85.4
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.1e-71 273.1 243 54.3
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 5.1e-70 268.5 194 69.6
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.9e-64 250.0 220 53.6
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 3.2e-64 249.2 225 54.2
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.3e-62 243.0 161 69.6
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.5e-61 240.4 222 58.1
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.8e-60 235.3 194 63.4
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 9.0e-59 231.1 165 68.5
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 9.0e-59 231.1 165 68.5
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.3e-57 227.3 142 76.8
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 5.5e-56 221.9 221 48.9
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.6e-47 193.7 123 78.0
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.1e-40 171.0 128 65.6
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 1.1e-37 161.0 164 52.4
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.7e-36 157.1 122 66.4
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.5e-32 142.1 93 74.2
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.7e-28 130.6 83 77.1
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 4.5e-26 122.5 90 65.6
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 5.9e-26 122.1 63 92.1
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 3.8e-25 119.4 71 77.5
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 2.3e-22 110.2 107 61.7
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 2.8e-20 103.2 55 81.8
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 3.2e-16 89.7 65 73.8
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 7.5e-13 78.6 152 31.6
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 5.0e-09 65.9 65 52.3
Cre14.g619613 Chlamydomonas reinhardtii HOM05D006316 ORTHO05D008032 5.6e-08 62.4 156 27.6


User provided reference genes

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