Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 2.5e-78 295.4 153 100.0
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 7.0e-25 117.9 113 55.8
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 1.3e-23 113.6 115 56.5
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 1.7e-23 113.2 113 54.9
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 1.7e-23 113.2 113 54.0
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 1.7e-23 113.2 113 59.3
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 5.0e-23 111.7 113 53.1
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 1.9e-22 109.8 113 49.6
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 4.3e-22 108.6 125 46.4
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 5.6e-22 108.2 113 55.8
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 6.2e-21 104.8 113 47.8
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 6.2e-21 104.8 113 48.7
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 3.1e-20 102.4 114 50.9
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 2.0e-19 99.8 115 51.3
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 9.8e-19 97.4 113 53.1
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.7e-18 96.7 113 48.7
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 1.7e-18 96.7 113 46.9
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 2.2e-18 96.3 115 55.7
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 2.2e-18 96.3 115 52.2
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 3.7e-18 95.5 113 52.2
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 3.7e-18 95.5 111 50.5
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 4.9e-18 95.1 115 47.8
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 4.9e-18 95.1 113 49.6
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 7.1e-17 91.3 114 51.8
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 1.2e-16 90.5 114 47.4
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 1.2e-16 90.5 111 47.7
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.1e-16 89.7 120 45.0
ClCG08G010060 Citrullus lanatus HOM05D005515 ORTHO05D006620 3.5e-16 89.0 87 54.0
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 4.6e-16 88.6 115 47.8
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 6.0e-16 88.2 113 48.7
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 1.3e-15 87.0 113 48.7
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 6.6e-15 84.7 111 48.6
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 8.6e-15 84.3 120 45.0
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 1.1e-14 84.0 113 46.0
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.1e-14 84.0 118 44.9
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 1.1e-14 84.0 114 47.4
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.5e-14 83.6 113 47.8
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 2.5e-14 82.8 111 46.8
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 2.5e-14 82.8 80 55.0
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 2.5e-14 82.8 136 44.1
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 3.3e-14 82.4 112 48.2
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 3.3e-14 82.4 111 46.8
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 4.3e-14 82.0 113 46.9
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.3e-14 82.0 96 49.0
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 4.3e-14 82.0 113 48.7
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 4.3e-14 82.0 113 49.6
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 5.6e-14 81.6 120 45.8
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 5.6e-14 81.6 114 49.1
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 5.6e-14 81.6 117 44.4
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 9.5e-14 80.9 92 50.0
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 9.5e-14 80.9 113 47.8
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 9.5e-14 80.9 113 45.1
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 9.5e-14 80.9 113 45.1
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 1.2e-13 80.5 113 47.8
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 1.2e-13 80.5 111 46.8
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 1.2e-13 80.5 113 50.4
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.6e-13 80.1 113 48.7
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 1.6e-13 80.1 113 46.0
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 2.1e-13 79.7 113 48.7
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 2.1e-13 79.7 113 47.8
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 2.1e-13 79.7 115 43.5
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.1e-13 79.7 113 44.2
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 2.1e-13 79.7 115 40.9
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.6e-13 79.0 114 47.4
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 3.6e-13 79.0 119 44.5
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 4.7e-13 78.6 113 45.1
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.7e-13 78.6 113 47.8
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.7e-13 78.6 113 46.9
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 4.7e-13 78.6 113 46.0
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 1.4e-12 77.0 114 48.2
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 1.8e-12 76.6 114 46.5
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.8e-12 76.6 114 43.0
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.8e-12 76.6 113 45.1
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.8e-12 76.6 113 46.9
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 1.8e-12 76.6 113 46.9
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 1.8e-12 76.6 120 45.0
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.8e-12 76.6 113 46.9
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.3e-12 76.3 113 43.4
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.3e-12 76.3 114 43.0
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 2.3e-12 76.3 110 43.6
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 3.1e-12 75.9 120 42.5
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.1e-12 75.9 113 46.9
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.1e-12 75.9 114 43.9
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 3.1e-12 75.9 113 41.6
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 5.2e-12 75.1 83 48.2
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 8.9e-12 74.3 113 46.9
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 1.2e-11 73.9 114 41.2
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 1.2e-11 73.9 113 41.6
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 1.5e-11 73.6 113 46.0
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 1.5e-11 73.6 113 46.0
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 1.5e-11 73.6 90 46.7
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 1.5e-11 73.6 113 46.0
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.5e-11 73.6 114 46.5
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 2.6e-11 72.8 84 46.4
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 2.6e-11 72.8 113 43.4
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 5.8e-11 71.6 114 44.7
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 5.8e-11 71.6 113 44.2
CSS0003202 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 7.6e-11 71.2 73 53.4
CSS0037049 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 7.6e-11 71.2 73 53.4
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 7.6e-11 71.2 184 35.3
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 7.6e-11 71.2 113 44.2
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 2.2e-10 69.7 113 43.4
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 6.4e-10 68.2 78 44.9
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 1.4e-09 67.0 114 43.0
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 7.1e-09 64.7 124 40.3
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 7.1e-09 64.7 91 45.1
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 9.2e-09 64.3 113 41.6
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 9.2e-09 64.3 70 48.6
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.2e-08 63.9 70 48.6
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 1.2e-08 63.9 113 36.3
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 1.2e-08 63.9 70 47.1
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 1.6e-08 63.5 70 47.1
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 4.6e-08 62.0 114 37.7
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 7.8e-08 61.2 109 39.4
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 1.5e-06 57.0 70 41.4
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.9e-06 56.6 85 40.0
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 2.5e-06 56.2 137 33.6
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 2.5e-06 56.2 81 45.7
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 9.6e-06 54.3 70 44.3


User provided reference genes

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