Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0897 Salvia bowleyana HOM05D005453 ORTHO05D006520 1.7e-157 559.3 283 100.0
SalBow2G2835 Salvia bowleyana HOM05D005453 ORTHO05D006520 1.7e-40 170.6 224 47.3
SalBow8G4900 Salvia bowleyana HOM05D005453 ORTHO05D006520 1.9e-28 130.6 71 93.0
MSTRG.666 Avicennia marina HOM05D005453 ORTHO05D006520 1.2e-22 111.3 230 34.8
SGA_v2.0_scaffold163G38065 Striga asiatica HOM05D005453 ORTHO05D006520 8.7e-21 105.1 230 32.2
THA.LOC104822093 Tarenaya hassleriana HOM05D005453 ORTHO05D006520 1.3e-16 91.3 55 70.9
Duzib268G1123 Durio zibethinus HOM05D005453 ORTHO05D006520 1.7e-16 90.9 55 70.9
MSTRG.7832 Avicennia marina HOM05D005453 ORTHO05D006520 2.9e-16 90.1 55 70.9
Gorai.005G189700 Gossypium raimondii HOM05D005453 ORTHO05D006520 2.9e-16 90.1 55 72.7
Rhsim12G0129300 Rhododendron simsii HOM05D005453 ORTHO05D006520 2.9e-16 90.1 227 32.2
Thecc.02G232200 Theobroma cacao HOM05D005453 ORTHO05D006520 2.9e-16 90.1 55 70.9
Ca_07371_v3 Cicer arietinum L. HOM05D005453 ORTHO05D006520 3.8e-16 89.7 78 53.8
Migut.L01350 Erythranthe guttata HOM05D005453 ORTHO05D006520 6.5e-16 89.0 214 31.8
COL.COLO4_36184 Corchorus olitorius HOM05D005453 ORTHO05D006520 1.1e-15 88.2 55 69.1
Nitab4.5_0000679g0110 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.1e-15 88.2 233 30.0
Solyc01g010470.2 Solanum lycopersicum HOM05D005453 ORTHO05D006520 1.1e-15 88.2 59 64.4
ClCG05G024670 Citrullus lanatus HOM05D005453 ORTHO05D006520 1.4e-15 87.8 102 47.1
COL.COLO4_34957 Corchorus olitorius HOM05D005453 ORTHO05D006520 1.4e-15 87.8 55 69.1
MELO3C012058.2 Cucumis melo HOM05D005453 ORTHO05D006520 1.4e-15 87.8 102 46.1
CsaV3_5G032260 Cucumis sativus L. HOM05D005453 ORTHO05D006520 1.4e-15 87.8 102 46.1
Cc11_g13580 Coffea canephora HOM05D005453 ORTHO05D006520 1.9e-15 87.4 55 65.5
Sopen01g006070 Solanum pennellii HOM05D005453 ORTHO05D006520 1.9e-15 87.4 55 67.3
PSO478G0523 Papaver somniferum HOM05D005453 ORTHO05D006520 2.5e-15 87.0 55 65.5
PGSC0003DMG400017617 Solanum tuberosum HOM05D005453 ORTHO05D006520 2.5e-15 87.0 55 69.1
Ciclev10031079m.g Citrus clementina HOM05D005453 ORTHO05D006520 3.2e-15 86.7 55 65.5
Haze_12074 Corylus avellana HOM05D005453 ORTHO05D006520 3.2e-15 86.7 55 67.3
PSO017G4002 Papaver somniferum HOM05D005453 ORTHO05D006520 3.2e-15 86.7 55 65.5
QL03p065960 Quercus lobata HOM05D005453 ORTHO05D006520 3.2e-15 86.7 54 66.7
Sabra10G0030200 Salix brachista HOM05D005453 ORTHO05D006520 3.2e-15 86.7 75 54.7
Hund05918 Selenicereus undatus HOM05D005453 ORTHO05D006520 3.2e-15 86.7 55 67.3
Zm00001eb217200 Zea mays HOM05D005453 ORTHO05D006520 3.2e-15 86.7 55 67.3
EL10Ac6g13139 Beta vulgaris HOM05D005453 ORTHO05D006520 4.2e-15 86.3 55 69.1
DCAR_031056 Daucus carota HOM05D005453 ORTHO05D006520 4.2e-15 86.3 55 65.5
FAN22G2419 Fragaria x ananassa HOM05D005453 ORTHO05D006520 4.2e-15 86.3 55 63.6
MBI05_g12576_MAGBIO Magnolia biondii HOM05D005453 ORTHO05D006520 4.2e-15 86.3 55 67.3
Potri.010G034600 Populus trichocarpa HOM05D005453 ORTHO05D006520 4.2e-15 86.3 55 67.3
PGR102G2554 Punica granatum HOM05D005453 ORTHO05D006520 4.2e-15 86.3 55 65.5
FvH4_4g32100 Fragaria vesca HOM05D005453 ORTHO05D006520 5.5e-15 85.9 55 63.6
FAN12G1353 Fragaria x ananassa HOM05D005453 ORTHO05D006520 5.5e-15 85.9 55 63.6
Potri.008G194300 Populus trichocarpa HOM05D005453 ORTHO05D006520 5.5e-15 85.9 53 66.0
RcHm_v2.0_Chr4g0440791 Rosa chinensis HOM05D005453 ORTHO05D006520 5.5e-15 85.9 55 63.6
Cfa009044 Carpinus fangiana HOM05D005453 ORTHO05D006520 7.2e-15 85.5 55 65.5
Oeu001597.1 Olea europaea HOM05D005453 ORTHO05D006520 7.2e-15 85.5 53 69.8
TWI75G0114 Tripterygium wilfordii HOM05D005453 ORTHO05D006520 7.2e-15 85.5 53 64.2
Peaxi162Scf00026g02226 Petunia axillaris HOM05D005453 ORTHO05D006520 9.4e-15 85.1 55 65.5
Sabra08G0147800 Salix brachista HOM05D005453 ORTHO05D006520 9.4e-15 85.1 53 64.2
Sc11g0001640 Simmondsia chinensis HOM05D005453 ORTHO05D006520 9.4e-15 85.1 55 67.3
PGSC0003DMG400026781 Solanum tuberosum HOM05D005453 ORTHO05D006520 9.4e-15 85.1 55 67.3
Atru.chr11.1865 Acer truncatum HOM05D005453 ORTHO05D006520 1.2e-14 84.7 56 62.5
Thhalv10007340m.g Eutrema salsugineum HOM05D005453 ORTHO05D006520 1.2e-14 84.7 55 65.5
CAN.G27.11 Capsicum annuum HOM05D005453 ORTHO05D006520 1.6e-14 84.3 55 67.3
MD13G1079900 Malus domestica HOM05D005453 ORTHO05D006520 1.6e-14 84.3 55 61.8
Nitab4.5_0002382g0040 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.6e-14 84.3 53 67.9
Peaxi162Scf00209g00610 Petunia axillaris HOM05D005453 ORTHO05D006520 1.6e-14 84.3 55 63.6
AT1G27070 Arabidopsis thaliana HOM05D005453 ORTHO05D006520 2.1e-14 84.0 55 63.6
Nn3g17115 Nelumbo nucifera HOM05D005453 ORTHO05D006520 2.7e-14 83.6 55 65.5
Actinidia19854 Actinidia chinensis HOM05D005453 ORTHO05D006520 3.6e-14 83.2 55 61.8
ECA234G1124 Erigeron canadensis HOM05D005453 ORTHO05D006520 3.6e-14 83.2 53 62.3
Medtr5g038210 Medicago truncatula HOM05D005453 ORTHO05D006520 3.6e-14 83.2 53 64.2
Os03g0686900 Oryza sativa ssp. japonica HOM05D005453 ORTHO05D006520 3.6e-14 83.2 55 67.3
vmacro16321 Vaccinium macrocarpon HOM05D005453 ORTHO05D006520 3.6e-14 83.2 55 65.5
AL1G38420 Arabidopsis lyrata HOM05D005453 ORTHO05D006520 4.6e-14 82.8 55 63.6
Gohir.D02G169300 Gossypium hirsutum HOM05D005453 ORTHO05D006520 4.6e-14 82.8 55 69.1
Sopen05g002890 Solanum pennellii HOM05D005453 ORTHO05D006520 4.6e-14 82.8 55 67.3
Carub.0001s2390 Capsella rubella HOM05D005453 ORTHO05D006520 6.1e-14 82.4 55 63.6
CARHR024830 Cardamine hirsuta HOM05D005453 ORTHO05D006520 6.1e-14 82.4 54 63.0
AUR62026269 Chenopodium quinoa HOM05D005453 ORTHO05D006520 6.1e-14 82.4 55 65.5
Nn4g23024 Nelumbo nucifera HOM05D005453 ORTHO05D006520 6.1e-14 82.4 55 63.6
Phvul.002G067500 Phaseolus vulgaris HOM05D005453 ORTHO05D006520 6.1e-14 82.4 54 61.1
unitig_22.g6530 Utricularia gibba HOM05D005453 ORTHO05D006520 6.1e-14 82.4 55 63.6
Eucgr.B03405 Eucalyptus grandis HOM05D005453 ORTHO05D006520 7.9e-14 82.0 53 62.3
Oeu011701.1 Olea europaea HOM05D005453 ORTHO05D006520 1.0e-13 81.6 102 42.2
Sp1g21710 Schrenkiella parvula HOM05D005453 ORTHO05D006520 1.0e-13 81.6 55 61.8
GSVIVG01020082001 Vitis vinifera HOM05D005453 ORTHO05D006520 1.0e-13 81.6 55 61.8
Aqoxy3G03253 Aquilegia oxysepala HOM05D005453 ORTHO05D006520 1.4e-13 81.3 55 61.8
BcaC05g26346 Brassica carinata HOM05D005453 ORTHO05D006520 1.4e-13 81.3 57 61.4
A09p40480 Brassica napus HOM05D003373 ORTHO05D004419 1.4e-13 81.3 55 60.0
C05p23700 Brassica napus HOM05D003373 ORTHO05D004419 1.4e-13 81.3 57 61.4
BolC5t31089H Brassica oleracea HOM05D005453 ORTHO05D006520 1.4e-13 81.3 57 61.4
BraA09t39545Z Brassica rapa HOM05D003373 ORTHO05D006520 1.4e-13 81.3 55 60.0
Lalb_Chr10g0097931 Lupinus albus HOM05D005453 ORTHO05D006520 1.4e-13 81.3 53 62.3
Prupe.1G266900 Prunus persica HOM05D005453 ORTHO05D006520 1.4e-13 81.3 55 56.4
Solyc05g006930.3 Solanum lycopersicum HOM05D005453 ORTHO05D006520 1.4e-13 81.3 55 65.5
TPR.G29465 Trifolium pratense HOM05D005453 ORTHO05D006520 1.4e-13 81.3 53 62.3
CANSAT64G2233 Cannabis sativa HOM05D005453 ORTHO05D006520 1.8e-13 80.9 102 43.1
Nitab4.5_0002969g0050 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.8e-13 80.9 233 28.3
Sed0006777 Sechium edule HOM05D005453 ORTHO05D006520 1.8e-13 80.9 54 66.7
Glyma.02G022500 Glycine max HOM05D005453 ORTHO05D006520 2.3e-13 80.5 53 60.4
BcaB07g32384 Brassica carinata HOM05D005453 ORTHO05D006520 3.0e-13 80.1 55 60.0
CAN.G827.6 Capsicum annuum HOM05D005453 ORTHO05D006520 3.9e-13 79.7 55 60.0
CiPaw.05G140600 Carya illinoinensis HOM05D005453 ORTHO05D006520 3.9e-13 79.7 55 61.8
Lalb_Chr04g0256391 Lupinus albus HOM05D005453 ORTHO05D006520 6.7e-13 79.0 55 61.8
Manes.01G191800 Manihot esculenta HOM05D005453 ORTHO05D006520 6.7e-13 79.0 55 56.4
VMungo1215G2350 Vigna mungo HOM05D005453 ORTHO05D006520 8.8e-13 78.6 54 59.3
Lj2g0004726 Lotus japonicus HOM05D005453 ORTHO05D006520 1.1e-12 78.2 53 62.3
CDE06G1042 Ceratophyllum demersum HOM05D005453 ORTHO05D006520 2.0e-12 77.4 53 60.4
HPP92_018829 Vanilla planifolia HOM05D005453 ORTHO05D006520 2.5e-12 77.0 53 62.3
Glyma.01G041500 Glycine max HOM05D005453 ORTHO05D006520 3.3e-12 76.6 53 60.4
Aa31LG7G8080 Aethionema arabicum HOM05D005453 ORTHO05D006520 4.3e-12 76.3 53 54.7
Hma1.2p1_0265F.1_g106550 Hydrangea macrophylla HOM05D005453 ORTHO05D006520 5.7e-12 75.9 86 43.0
ATR0665G247 Amborella trichopoda HOM05D005453 ORTHO05D006520 7.4e-12 75.5 53 60.4
Actinidia08210 Actinidia chinensis HOM05D005453 ORTHO05D006520 9.7e-12 75.1 55 60.0
HanXRQChr03g0092811 Helianthus annuus HOM05D005453 ORTHO05D006520 9.7e-12 75.1 53 58.5
arahy.Tifrunner.gnm1.ann1.7H81I7 Arachis hypogaea HOM05D005453 ORTHO05D006520 1.3e-11 74.7 54 59.3
arahy.Tifrunner.gnm1.ann1.62035P Arachis hypogaea HOM05D005453 ORTHO05D006520 1.7e-11 74.3 54 61.1
arahy.Tifrunner.gnm1.ann1.C864RN Arachis hypogaea HOM05D005453 ORTHO05D006520 8.2e-11 72.0 53 58.5
HanXRQChr08g0209161 Helianthus annuus HOM05D005453 ORTHO05D006520 8.2e-11 72.0 52 53.8
Oeu057176.2 Olea europaea HOM05D005453 ORTHO05D006520 1.5e-09 67.8 71 52.1
CBR_g23347 Chara braunii HOM05D005453 ORTHO05D006520 4.5e-09 66.2 52 51.9
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 7.7e-09 65.5 96 38.5
AagrBONN_evm.TU.Sc2ySwM_117.2704 Anthoceros agrestis HOM05D005453 ORTHO05D006520 1.7e-08 64.3 52 50.0
Lsat_1_v5_gn_8_53620 Lactuca sativa HOM05D005453 ORTHO05D006520 1.7e-08 64.3 44 59.1
SEGI_23512 Sequoiadendron giganteum HOM05D005453 ORTHO05D006520 2.9e-08 63.5 45 60.0
SMO353G0350 Selaginella moellendorffii HOM05D005453 ORTHO05D006520 1.1e-07 61.6 54 48.1
Nitab4.5_0002291g0010 Nicotiana tabacum HOM05D005453 ORTHO05D006520 1.4e-07 61.2 61 47.5
Ah.08g211560 Amaranthus hybridus HOM05D007148 ORTHO05D009047 9.4e-07 58.5 56 51.8
Mapoly0020s0141 Marchantia polymorpha HOM05D005453 ORTHO05D006520 1.2e-06 58.2 52 46.2
Ciclev10012080m.g Citrus clementina HOM05D007148 ORTHO05D009047 4.7e-06 56.2 51 52.9
Duzib093G0361 Durio zibethinus HOM05D007148 ORTHO05D009047 7.9e-06 55.5 47 53.2


User provided reference genes

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