Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6552 Salvia bowleyana HOM05D001557 ORTHO05D001299 6.4e-107 391.0 228 100.0
SalBow4G0200 Salvia bowleyana HOM05D001557 ORTHO05D001299 5.2e-24 115.5 59 94.9
SalBow8G0091 Salvia bowleyana HOM05D001557 ORTHO05D001299 7.1e-13 78.6 57 71.9
SGA_v2.0_scaffold63G21642 Striga asiatica HOM05D001557 ORTHO05D001299 6.6e-11 72.0 57 61.4
EL10Ac5g12437 Beta vulgaris HOM05D001557 ORTHO05D001299 3.3e-10 69.7 51 64.7
SalBow2G0883 Salvia bowleyana HOM05D001557 ORTHO05D001299 3.3e-10 69.7 57 59.6
Migut.L01276 Erythranthe guttata HOM05D001557 ORTHO05D001299 4.3e-10 69.3 57 61.4
Solyc05g007840.3 Solanum lycopersicum HOM05D001557 ORTHO05D001299 5.6e-10 68.9 51 64.7
GSVIVG01010499001 Vitis vinifera HOM05D001557 ORTHO05D001299 7.3e-10 68.6 48 66.7
PGSC0003DMG400018430 Solanum tuberosum HOM05D001557 ORTHO05D001299 9.5e-10 68.2 53 64.2
PGSC0003DMG400018453 Solanum tuberosum HOM05D001557 ORTHO05D001299 9.5e-10 68.2 53 64.2
Migut.E00082 Erythranthe guttata HOM05D001557 ORTHO05D001299 1.2e-09 67.8 59 59.3
Sopen05g003700 Solanum pennellii HOM05D001557 ORTHO05D001299 1.2e-09 67.8 48 66.7
unitig_21.g20420 Utricularia gibba HOM05D001557 ORTHO05D001299 1.2e-09 67.8 57 59.6
CSS0022504 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.6e-09 67.4 48 64.6
CSS0033825 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.6e-09 67.4 48 64.6
CSS0035188 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.6e-09 67.4 48 64.6
Prupe.1G276500 Prunus persica HOM05D001557 ORTHO05D001299 2.1e-09 67.0 48 66.7
Nitab4.5_0000040g0140 Nicotiana tabacum HOM05D001557 ORTHO05D001299 2.8e-09 66.6 48 64.6
Nitab4.5_0004623g0020 Nicotiana tabacum HOM05D001557 ORTHO05D001299 2.8e-09 66.6 48 64.6
SGA_v2.0_scaffold172G38963 Striga asiatica HOM05D001557 ORTHO05D001299 2.8e-09 66.6 59 55.9
Eucgr.G02491 Eucalyptus grandis HOM05D001557 ORTHO05D001299 3.6e-09 66.2 54 59.3
QL03p068643 Quercus lobata HOM05D001557 ORTHO05D001299 4.7e-09 65.9 55 58.2
MSTRG.712 Avicennia marina HOM05D001557 ORTHO05D001299 6.2e-09 65.5 57 59.6
Cpa.g.sc1.44 Carica papaya HOM05D001557 ORTHO05D001299 6.2e-09 65.5 48 64.6
MD09G1014700 Malus domestica HOM05D001557 ORTHO05D001299 6.2e-09 65.5 48 64.6
MD16G1071200 Malus domestica HOM05D001557 ORTHO05D001299 6.2e-09 65.5 48 64.6
CSS0012568 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 8.1e-09 65.1 48 62.5
CSS0039687 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 8.1e-09 65.1 48 62.5
Thecc.02G344000 Theobroma cacao HOM05D001557 ORTHO05D001299 8.1e-09 65.1 54 57.4
CiPaw.06G086600 Carya illinoinensis HOM05D001557 ORTHO05D001299 1.1e-08 64.7 48 62.5
Cc06_g19140 Coffea canephora HOM05D001557 ORTHO05D001299 1.1e-08 64.7 54 57.4
BcaC06g31205 Brassica carinata HOM05D001557 ORTHO05D001299 1.4e-08 64.3 51 60.8
BcaC06g34023 Brassica carinata HOM05D001557 ORTHO05D001299 1.4e-08 64.3 51 60.8
C07p33620 Brassica napus HOM05D001557 ORTHO05D001299 1.4e-08 64.3 51 60.8
BraA06t27219Z Brassica rapa HOM05D001557 ORTHO05D001299 1.4e-08 64.3 51 60.8
CSS0019472 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.4e-08 64.3 47 63.8
CAN.G1580.1 Capsicum annuum HOM05D001557 ORTHO05D001299 1.4e-08 64.3 48 64.6
AUR62007047 Chenopodium quinoa HOM05D001557 ORTHO05D001299 1.4e-08 64.3 50 60.0
AUR62019911 Chenopodium quinoa HOM05D001557 ORTHO05D001299 1.4e-08 64.3 50 60.0
Dinv16661 Davidia involucrata HOM05D001557 ORTHO05D001299 1.4e-08 64.3 48 64.6
THA.LOC104801801 Tarenaya hassleriana HOM05D001557 ORTHO05D001299 1.4e-08 64.3 48 66.7
Actinidia12293 Actinidia chinensis HOM05D001557 ORTHO05D001299 1.8e-08 63.9 48 62.5
Cfa008965 Carpinus fangiana HOM05D001557 ORTHO05D001299 1.8e-08 63.9 48 62.5
Haze_11996 Corylus avellana HOM05D001557 ORTHO05D001299 1.8e-08 63.9 48 62.5
PSO013G0284 Papaver somniferum HOM05D001557 ORTHO05D001299 1.8e-08 63.9 88 46.6
FvH4_4g31180 Fragaria vesca HOM05D001557 ORTHO05D001299 2.3e-08 63.5 51 58.8
FAN07G1395 Fragaria x ananassa HOM05D001557 ORTHO05D001299 2.3e-08 63.5 51 58.8
FAN17G1523 Fragaria x ananassa HOM05D001557 ORTHO05D001299 2.3e-08 63.5 51 58.8
Peaxi162Scf00222g00059 Petunia axillaris HOM05D001557 ORTHO05D001299 2.3e-08 63.5 56 57.1
CSS0023774 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 3.1e-08 63.2 45 64.4
Sc04g0008000 Simmondsia chinensis HOM05D001557 ORTHO05D001299 3.1e-08 63.2 48 60.4
Aa31LG2G7340 Aethionema arabicum HOM05D001557 ORTHO05D001299 4.0e-08 62.8 52 59.6
AL5G12630 Arabidopsis lyrata HOM05D001557 ORTHO05D001299 5.2e-08 62.4 51 60.8
AT2G03050 Arabidopsis thaliana HOM05D001557 ORTHO05D001299 5.2e-08 62.4 51 60.8
Carub.0005s0190 Capsella rubella HOM05D001557 ORTHO05D001299 5.2e-08 62.4 51 60.8
CARHR145420 Cardamine hirsuta HOM05D001557 ORTHO05D001299 5.2e-08 62.4 51 60.8
Thhalv10004730m.g Eutrema salsugineum HOM05D001557 ORTHO05D001299 5.2e-08 62.4 51 60.8
PGR119G1320 Punica granatum HOM05D001557 ORTHO05D001299 5.2e-08 62.4 48 60.4
Sp2g14050 Schrenkiella parvula HOM05D001557 ORTHO05D001299 6.8e-08 62.0 51 60.8
Sed0014117 Sechium edule HOM05D001557 ORTHO05D001299 6.8e-08 62.0 48 58.3
TWI31G0045 Tripterygium wilfordii HOM05D001557 ORTHO05D001299 6.8e-08 62.0 48 62.5
RcHm_v2.0_Chr4g0439561 Rosa chinensis HOM05D001557 ORTHO05D001299 8.9e-08 61.6 51 56.9
CSS0040837 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.2e-07 61.2 48 60.4
Lj1g0013225 Lotus japonicus HOM05D001557 ORTHO05D001299 1.2e-07 61.2 71 47.9
Duzib251G0578 Durio zibethinus HOM05D001557 ORTHO05D001299 1.5e-07 60.8 54 53.7
FAN12G3044 Fragaria x ananassa HOM05D001557 ORTHO05D001299 1.5e-07 60.8 51 56.9
Manes.01G034700 Manihot esculenta HOM05D001557 ORTHO05D001299 1.5e-07 60.8 59 50.8
Oeu055110.1 Olea europaea HOM05D001557 ORTHO05D001299 1.5e-07 60.8 54 53.7
PSO832G2716 Papaver somniferum HOM05D001557 ORTHO05D001299 1.5e-07 60.8 48 58.3
ATR0730G079 Amborella trichopoda HOM05D001557 ORTHO05D001299 2.0e-07 60.5 54 53.7
vmacro20110 Vaccinium macrocarpon HOM05D001557 ORTHO05D001299 2.0e-07 60.5 54 55.6
Rhsim05G0186700 Rhododendron simsii HOM05D001557 ORTHO05D001299 3.4e-07 59.7 59 49.2
Gohir.D06G218600 Gossypium hirsutum HOM05D001557 ORTHO05D001299 4.4e-07 59.3 54 51.9
Gorai.010G247700 Gossypium raimondii HOM05D001557 ORTHO05D001299 4.4e-07 59.3 54 51.9
TAR371G0335 Trochodendron aralioides HOM05D001557 ORTHO05D001299 4.4e-07 59.3 48 56.2
Nn4g23205 Nelumbo nucifera HOM05D001557 ORTHO05D001299 5.8e-07 58.9 48 58.3
TAR629G2603 Trochodendron aralioides HOM05D001557 ORTHO05D001299 5.8e-07 58.9 54 51.9
Potri.008G088100 Populus trichocarpa HOM05D001557 ORTHO05D001299 7.6e-07 58.5 57 47.4
Cc11_g12840 Coffea canephora HOM05D001557 ORTHO05D001299 9.9e-07 58.2 54 50.0
COL.COLO4_22949 Corchorus olitorius HOM05D001557 ORTHO05D001299 9.9e-07 58.2 51 52.9
Ciclev10032299m.g Citrus clementina HOM05D001557 ORTHO05D001299 1.7e-06 57.4 48 52.1
DCAR_027422 Daucus carota HOM05D001557 ORTHO05D001299 2.2e-06 57.0 51 54.9
DCAR_031007 Daucus carota HOM05D001557 ORTHO05D001299 2.2e-06 57.0 48 58.3
Gohir.A06G203100 Gossypium hirsutum HOM05D001557 ORTHO05D001299 2.2e-06 57.0 54 50.0
HanXRQChr01g0013231 Helianthus annuus HOM05D001557 ORTHO05D001299 2.9e-06 56.6 54 53.7
Potri.010G167400 Populus trichocarpa HOM05D001557 ORTHO05D001299 2.9e-06 56.6 48 52.1
ECA246G3210 Erigeron canadensis HOM05D001557 ORTHO05D001299 3.7e-06 56.2 54 53.7
Lsat_1_v5_gn_3_54060 Lactuca sativa HOM05D001557 ORTHO05D001299 3.7e-06 56.2 54 51.9
CDE06G2314 Ceratophyllum demersum HOM05D001557 ORTHO05D001299 4.9e-06 55.8 53 52.8
CDE08G0018 Ceratophyllum demersum HOM05D001557 ORTHO05D001299 6.4e-06 55.5 53 52.8
MELO3C012106.2 Cucumis melo HOM05D001557 ORTHO05D001299 6.4e-06 55.5 48 54.2
Atru.chr11.1766 Acer truncatum HOM05D001557 ORTHO05D001299 8.4e-06 55.1 54 50.0


User provided reference genes

Program Settings