Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 0.0e+00 1623.6 880 100.0
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 0.0e+00 1476.5 866 94.0
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 1.5e-308 1062.8 897 66.7
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 2.3e-277 959.1 892 63.5
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 2.8e-275 952.2 900 60.9
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 2.3e-261 906.0 789 62.6
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 5.1e-261 904.8 900 57.7
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.1e-260 903.7 895 57.8
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 3.3e-260 902.1 896 58.6
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 3.1e-258 895.6 827 60.7
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 3.1e-258 895.6 827 60.6
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 2.5e-255 885.9 795 62.5
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 1.1e-250 870.5 886 56.4
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 3.1e-250 869.0 894 56.3
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 6.5e-248 861.3 887 55.8
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.0e-240 837.4 798 59.9
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 2.5e-239 832.8 894 53.8
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 4.6e-238 828.6 907 54.5
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 2.0e-236 823.2 899 55.2
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 9.7e-236 820.8 895 55.0
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 3.7e-235 818.9 954 51.6
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 3.1e-234 815.8 905 54.7
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 4.5e-233 812.0 798 58.3
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 7.7e-233 811.2 823 56.4
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 6.5e-232 808.1 890 52.8
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 4.2e-231 805.4 881 54.5
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 7.2e-231 804.7 909 52.8
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.6e-230 803.5 887 52.6
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 2.1e-230 803.1 928 51.8
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 1.8e-229 800.0 911 53.7
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 2.3e-229 799.7 920 52.7
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.3e-228 795.8 917 51.6
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 7.4e-228 794.7 910 54.2
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 9.7e-228 794.3 940 50.9
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 3.7e-227 792.3 887 52.3
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 2.4e-226 789.6 899 53.4
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 2.4e-226 789.6 886 53.4
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 2.4e-226 789.6 942 51.9
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 5.3e-226 788.5 922 52.8
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 5.3e-226 788.5 885 53.2
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 7.0e-226 788.1 894 52.8
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 9.1e-226 787.7 897 53.6
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 1.6e-225 786.9 880 52.5
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 3.5e-225 785.8 883 54.4
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.5e-225 785.4 911 54.8
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 5.9e-225 785.0 882 52.5
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 2.5e-223 779.6 845 52.3
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 9.4e-223 777.7 881 52.2
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.2e-220 770.8 839 54.6
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 1.2e-220 770.8 923 51.7
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 2.0e-220 770.0 896 53.7
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 1.7e-219 766.9 882 51.7
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 1.7e-219 766.9 877 52.2
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 1.1e-218 764.2 779 54.8
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 9.1e-218 761.1 904 50.7
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 5.9e-217 758.4 786 55.5
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.3e-216 757.3 882 52.4
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.1e-215 754.2 892 50.9
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.6e-214 750.4 877 51.8
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 1.6e-214 750.4 902 51.7
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 1.0e-213 747.7 838 52.9
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 2.3e-213 746.5 896 51.2
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 2.2e-211 740.0 803 53.4
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.8e-210 736.9 806 51.5
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 2.0e-209 733.4 912 49.6
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 3.5e-209 732.6 895 49.8
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 4.5e-209 732.3 850 51.6
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 7.7e-209 731.5 802 53.0
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 7.7e-209 731.5 800 52.9
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 3.8e-208 729.2 796 52.5
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 5.0e-208 728.8 803 53.1
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 1.1e-207 727.6 805 52.5
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 5.5e-207 725.3 796 53.3
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.2e-206 724.2 796 53.3
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 1.0e-205 721.1 799 52.3
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 1.2e-204 717.6 802 51.4
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 2.0e-204 716.8 796 51.6
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 9.8e-204 714.5 834 51.0
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.3e-203 714.1 895 47.4
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 3.1e-202 709.5 831 50.3
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 2.9e-200 703.0 807 51.2
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 1.5e-199 700.7 773 51.6
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 1.2e-198 697.6 872 48.9
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 2.6e-196 689.9 649 58.9
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 9.5e-191 671.4 724 53.2
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 1.8e-189 667.2 878 45.9
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 9.8e-188 661.4 802 49.3
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 1.8e-173 614.0 739 49.9
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 8.9e-173 611.7 826 45.9
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 6.4e-171 605.5 713 49.6
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 6.2e-166 589.0 752 46.4
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 5.6e-159 565.8 688 51.3
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 6.9e-157 558.9 881 41.9
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 6.2e-150 535.8 583 54.2
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 5.8e-148 529.3 408 63.0
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 8.4e-147 525.4 460 59.8
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 3.3e-143 513.5 885 43.2
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 4.3e-143 513.1 477 56.4
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 7.9e-137 492.3 585 48.5
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 1.7e-123 448.0 505 53.1
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 1.8e-112 411.4 414 54.8
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 1.1e-101 375.6 768 34.5
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 1.5e-82 312.0 222 69.8
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 2.5e-82 311.2 371 52.3
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 4.9e-78 297.0 701 32.5
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 9.2e-77 292.7 701 31.5
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 5.6e-74 283.5 741 31.0
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 1.8e-72 278.5 471 40.3
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 1.6e-65 255.4 969 28.0
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.2e-60 239.2 219 62.6
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 5.2e-56 223.8 266 46.6
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 6.0e-52 210.3 143 74.1
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 8.4e-38 163.3 251 49.0
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 7.4e-34 150.2 202 50.5
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 2.9e-30 138.3 216 39.8
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 2.9e-22 111.7 63 81.0
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 1.3e-17 96.3 120 54.2
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 8.2e-17 93.6 156 45.5
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 3.6e-12 78.2 87 52.9
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 3.6e-12 78.2 87 52.9
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 4.6e-12 77.8 72 62.5
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 1.5e-10 72.8 174 34.5
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 5.7e-10 70.9 137 39.4
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 1.5e-07 62.8 64 46.9
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 4.5e-07 61.2 99 38.4


User provided reference genes

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