Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 2.1e-177 625.5 312 100.0
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 6.9e-120 434.5 309 72.5
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 2.2e-118 429.5 309 71.2
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 7.7e-103 377.9 309 63.8
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 2.5e-93 346.3 310 58.7
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 7.2e-93 344.7 305 59.0
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 2.7e-92 342.8 313 58.5
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 8.0e-92 341.3 313 58.1
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 1.5e-90 337.0 310 57.7
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 9.8e-90 334.3 309 57.6
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 8.3e-89 331.3 292 56.5
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 1.2e-87 327.4 400 46.8
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 9.5e-85 317.8 309 53.4
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.4e-83 313.9 353 51.3
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.8e-83 313.5 286 56.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 2.3e-83 313.2 296 56.4
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 2.2e-81 306.6 309 51.8
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.2e-79 300.8 300 51.7
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.6e-79 300.4 300 53.3
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 7.8e-79 298.1 291 52.9
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 5.0e-78 295.4 310 50.6
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.9e-77 293.5 309 50.8
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 2.5e-77 293.1 328 49.7
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 3.3e-77 292.7 305 50.8
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 3.3e-77 292.7 296 51.7
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 5.6e-77 292.0 283 53.0
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 7.3e-77 291.6 296 51.0
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 7.3e-77 291.6 310 50.0
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.6e-76 290.4 286 51.7
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 4.7e-76 288.9 296 51.4
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 4.7e-76 288.9 305 50.2
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 4.7e-76 288.9 286 52.1
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 6.1e-76 288.5 296 50.3
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 8.0e-76 288.1 296 51.0
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 8.0e-76 288.1 309 49.5
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.8e-75 287.0 299 54.8
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.0e-75 285.8 310 47.7
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 4.0e-75 285.8 306 49.7
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 5.2e-75 285.4 294 50.0
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.8e-75 285.0 310 47.4
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 1.2e-74 284.3 296 51.0
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 5.7e-74 282.0 296 50.0
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 5.7e-74 282.0 296 50.3
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.3e-73 280.8 299 50.8
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 2.2e-73 280.0 296 49.7
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 2.2e-73 280.0 309 47.9
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 2.9e-73 279.6 297 50.5
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.7e-73 279.3 293 50.9
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 8.3e-73 278.1 313 49.5
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.4e-72 277.3 285 51.6
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 2.4e-72 276.6 313 47.6
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 2.4e-72 276.6 295 49.2
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.6e-71 273.9 300 47.0
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 3.5e-71 272.7 314 47.5
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.3e-70 270.8 291 51.9
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 2.3e-70 270.0 292 50.3
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 8.6e-70 268.1 317 45.4
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 9.5e-69 264.6 308 44.5
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 9.5e-69 264.6 308 45.1
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 1.2e-68 264.2 310 46.8
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 4.7e-68 262.3 298 44.0
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 6.2e-68 261.9 394 40.6
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 6.2e-68 261.9 394 40.6
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 2.0e-66 256.9 307 43.3
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 2.0e-66 256.9 294 44.6
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 3.4e-66 256.1 303 43.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 4.4e-66 255.8 336 41.7
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 7.5e-66 255.0 299 43.8
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 7.5e-66 255.0 305 46.9
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 2.2e-65 253.4 297 45.5
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 8.3e-65 251.5 286 44.8
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 5.4e-64 248.8 286 44.1
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 7.0e-64 248.4 205 62.9
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 2.0e-63 246.9 300 42.3
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 7.8e-63 245.0 228 54.8
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 1.5e-61 240.7 305 44.3
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.3e-61 239.6 251 49.0
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 2.8e-60 236.5 291 46.0
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 3.6e-60 236.1 304 43.8
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 4.7e-60 235.7 236 51.3
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 8.1e-60 235.0 247 49.4
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 8.9e-59 231.5 170 64.1
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 2.6e-58 229.9 285 42.5
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 3.7e-57 226.1 276 42.0
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 4.9e-57 225.7 163 63.8
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 7.1e-56 221.9 272 42.3
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 2.7e-55 219.9 156 64.7
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 5.6e-53 212.2 227 50.7
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 3.1e-51 206.5 309 41.1
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 9.9e-50 201.4 313 41.2
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 9.2e-48 194.9 258 44.6
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 8.6e-46 188.3 176 54.0
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 1.1e-43 181.4 293 38.6
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 4.0e-43 179.5 302 40.4
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.0e-43 179.5 302 40.4
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 2.0e-42 177.2 236 42.8
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-41 173.7 302 40.1
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 5.4e-40 169.1 224 42.0
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 5.1e-38 162.5 284 39.1
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.8e-36 156.0 300 37.0
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 3.4e-34 149.8 191 43.5
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.8e-34 149.1 294 37.1
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.1e-31 140.6 298 35.9
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 3.7e-28 129.8 290 31.4
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 1.1e-27 128.3 291 30.2
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 5.3e-27 125.9 309 28.8
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 9.0e-27 125.2 114 53.5
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 2.7e-23 113.6 122 51.6
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.0e-22 110.2 293 29.0
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 6.7e-22 109.0 156 38.5
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 1.1e-21 108.2 281 27.0
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 2.1e-20 104.0 128 43.8
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 2.8e-20 103.6 306 29.4
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 3.1e-19 100.1 283 28.6
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 3.1e-19 100.1 78 62.8
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 1.1e-16 91.7 157 35.7
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 7.1e-16 89.0 111 44.1
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 3.3e-13 80.1 63 50.8
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 1.8e-11 74.3 58 65.5


User provided reference genes

Program Settings