Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.1e-295 1019.2 508 100.0
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 2.5e-204 715.7 556 66.7
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 3.6e-190 668.7 534 66.3
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 2.4e-186 656.0 554 62.3
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 4.8e-163 578.6 560 55.5
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 1.1e-162 577.4 547 56.7
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 1.8e-162 576.6 550 56.2
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 2.7e-161 572.8 555 55.1
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 3.5e-161 572.4 547 57.0
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 5.0e-160 568.5 564 54.8
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 6.5e-160 568.2 546 55.9
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 1.1e-159 567.4 517 58.8
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 7.2e-159 564.7 554 54.3
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 6.1e-158 561.6 560 54.6
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 1.4e-157 560.5 555 55.5
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 4.0e-157 558.9 556 55.0
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.4e-156 555.8 537 55.9
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 4.4e-156 555.4 554 53.8
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 4.4e-156 555.4 541 54.3
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 5.7e-156 555.1 625 50.9
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 1.4e-154 550.4 543 53.8
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.4e-154 550.4 615 50.6
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 9.1e-154 547.7 551 53.0
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 3.8e-152 542.3 550 53.6
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 1.9e-151 540.0 578 52.1
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.2e-150 537.3 525 53.7
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.2e-150 537.3 555 53.3
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 2.1e-150 536.6 525 54.1
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 8.0e-150 534.6 523 54.3
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.0e-149 534.3 548 52.2
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 1.4e-149 533.9 534 53.6
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.8e-149 533.5 521 54.5
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.8e-149 533.5 515 53.8
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 1.2e-148 530.8 539 53.2
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 1.5e-148 530.4 505 54.5
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 2.0e-148 530.0 520 53.5
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 2.6e-148 529.6 531 52.9
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 2.6e-148 529.6 491 56.8
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 5.7e-148 528.5 539 51.4
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 1.7e-147 526.9 565 51.2
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 8.3e-147 524.6 519 52.4
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 2.4e-146 523.1 533 52.2
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 5.4e-146 521.9 503 53.1
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 5.4e-146 521.9 504 53.0
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 7.0e-146 521.5 520 52.5
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 7.0e-146 521.5 502 53.6
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 9.2e-146 521.2 555 51.0
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.2e-145 520.8 523 53.7
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 2.7e-145 519.6 523 51.1
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 3.5e-145 519.2 534 52.8
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.3e-144 517.3 515 53.2
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 8.6e-144 514.6 572 49.1
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 2.1e-142 510.0 501 53.7
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 1.4e-141 507.3 548 50.9
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 1.5e-140 503.8 471 57.5
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.5e-140 503.8 507 52.1
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 2.6e-140 503.1 522 52.9
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 2.6e-140 503.1 543 53.4
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 2.2e-139 500.0 520 53.3
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 4.9e-139 498.8 487 54.8
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 1.9e-138 496.9 485 55.3
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.9e-138 496.9 459 58.8
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 5.4e-138 495.4 488 54.7
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 3.5e-137 492.7 520 51.7
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 4.6e-137 492.3 491 53.8
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 4.6e-137 492.3 488 54.1
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 4.6e-137 492.3 485 54.8
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 6.0e-137 491.9 491 53.8
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 3.0e-136 489.6 582 48.3
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 3.9e-136 489.2 489 55.0
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 5.0e-136 488.8 511 51.3
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 4.3e-135 485.7 514 50.2
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 2.1e-134 483.4 491 53.6
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 2.8e-134 483.0 496 52.4
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 6.2e-134 481.9 521 51.1
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 6.2e-134 481.9 496 53.4
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 8.0e-134 481.5 487 53.6
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 8.0e-134 481.5 487 53.6
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 5.2e-133 478.8 497 52.9
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.5e-132 477.2 596 46.1
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 2.6e-132 476.5 533 49.0
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 3.4e-132 476.1 410 59.3
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 9.8e-132 474.6 494 52.6
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.3e-128 464.2 547 47.0
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 7.3e-127 458.4 506 50.4
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 9.5e-127 458.0 400 59.8
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 2.6e-124 449.9 488 50.2
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 7.5e-124 448.4 486 51.2
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 7.5e-124 448.4 535 46.2
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 9.9e-124 448.0 478 50.2
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.9e-123 446.4 509 49.7
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 4.9e-123 445.7 487 50.1
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.6e-118 430.6 273 74.4
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.9e-114 417.2 254 77.2
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 1.2e-113 414.5 343 61.5
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 1.7e-112 410.6 380 57.4
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 9.9e-108 394.8 267 70.8
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 1.3e-104 384.4 545 42.6
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.3e-102 377.9 537 41.5
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.1e-101 374.8 538 40.0
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 6.9e-93 345.5 289 63.3
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 3.5e-89 333.2 211 73.9
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 2.5e-87 327.0 445 44.3
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 3.4e-84 316.6 256 60.9
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.9e-82 310.8 376 48.1
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.8e-78 297.0 225 64.4
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 6.9e-69 265.8 246 57.3
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 4.2e-66 256.5 314 43.9
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 9.7e-55 218.8 246 46.3
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 6.1e-49 199.5 282 38.3
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 8.8e-48 195.7 215 49.3
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 2.0e-47 194.5 153 62.7
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.8e-33 147.5 125 56.8
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 8.0e-33 146.0 217 36.9
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 2.2e-30 137.9 106 67.0
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.0e-27 129.0 205 35.6
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.8e-24 118.2 217 34.1
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.3e-24 117.9 106 50.9
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 4.1e-21 107.1 316 26.3
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 7.0e-21 106.3 215 35.3
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.2e-17 95.5 187 35.8
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 1.1e-16 92.4 44 90.9
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.8e-16 91.7 105 46.7
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.3e-16 91.3 180 29.4
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.3e-16 91.3 130 36.9
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 3.7e-14 84.0 197 33.0
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.6e-12 78.6 39 84.6
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 7.8e-12 76.3 65 56.9
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 3.3e-10 70.9 152 34.2
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.1e-09 68.2 113 35.4
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 6.2e-09 66.6 55 52.7
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 1.4e-08 65.5 36 80.6


User provided reference genes

Program Settings