Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G0282 Salvia bowleyana HOM05D005486 ORTHO05D014301 1.4e-145 519.6 276 100.0
SalBow3G0362 Salvia bowleyana HOM05D029492 ORTHO05D014301 6.7e-66 255.0 203 70.9
SalBow8G4712 Salvia bowleyana HOM05D000195 ORTHO05D014301 3.2e-52 209.5 188 64.9
SalBow8G3921 Salvia bowleyana HOM05D003746 ORTHO05D014301 1.0e-50 204.5 185 68.6
SalBow8G1304 Salvia bowleyana HOM05D029492 ORTHO05D014301 1.3e-45 187.6 127 79.5
SalBow8G1909 Salvia bowleyana HOM05D029492 ORTHO05D014301 2.1e-43 180.3 229 52.8
SalBow8G1626 Salvia bowleyana HOM05D005486 ORTHO05D014301 5.7e-33 145.6 94 94.7
SalBow5G2466 Salvia bowleyana HOM05D049277 ORTHO05D014301 1.3e-29 134.4 70 92.9
SalBow5G5684 Salvia bowleyana HOM05D007921 ORTHO05D010172 8.0e-19 98.6 211 42.2
Gohir.D12G176000 Gossypium hirsutum HOM05D005486 ORTHO05D007411 2.3e-18 97.1 54 85.2
Gorai.008G188400 Gossypium raimondii HOM05D005486 ORTHO05D007411 2.3e-18 97.1 54 85.2
Gohir.A12G173400 Gossypium hirsutum HOM05D005486 ORTHO05D007411 3.0e-18 96.7 54 83.3
Lsat_1_v5_gn_8_38000 Lactuca sativa HOM05D005486 ORTHO05D007411 3.0e-18 96.7 54 85.2
Duzib251G0619 Durio zibethinus HOM05D005486 ORTHO05D007411 5.2e-18 95.9 43 100.0
Thecc.02G364500 Theobroma cacao HOM05D005486 ORTHO05D007411 6.7e-18 95.5 43 97.7
CAN.G184.62 Capsicum annuum HOM05D005486 ORTHO05D007411 1.2e-17 94.7 43 97.7
ECA233G2219 Erigeron canadensis HOM05D005486 ORTHO05D007411 1.2e-17 94.7 43 97.7
Lalb_Chr10g0099591 Lupinus albus HOM05D005486 ORTHO05D007411 1.2e-17 94.7 43 97.7
Haze_11801 Corylus avellana HOM05D005486 ORTHO05D007411 1.5e-17 94.4 44 95.5
Glyma.01G092400 Glycine max HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 95.3
Glyma.02G129800 Glycine max HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 95.3
Nitab4.5_0010558g0010 Nicotiana tabacum HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 95.3
Phvul.003G024300 Phaseolus vulgaris HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 97.7
SalBow8G5042 Salvia bowleyana HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 97.7
Hund05782 Selenicereus undatus HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 97.7
Sopen05g005890 Solanum pennellii HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 95.3
PGSC0003DMG400025103 Solanum tuberosum HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 95.3
GSVIVG01012004001 Vitis vinifera HOM05D005486 ORTHO05D007411 1.5e-17 94.4 43 97.7
COL.COLO4_11242 Corchorus olitorius HOM05D005486 ORTHO05D007411 2.0e-17 94.0 43 97.7
Nn3g17656 Nelumbo nucifera HOM05D005486 ORTHO05D007411 2.0e-17 94.0 43 95.3
PGR119G1261 Punica granatum HOM05D005486 ORTHO05D007411 2.0e-17 94.0 43 95.3
Aa31sc12G40 Aethionema arabicum HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
AT1G68720 Arabidopsis thaliana HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
BcaB05g24405 Brassica carinata HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
BcaC03g14978 Brassica carinata HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
A02p15280 Brassica napus HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
C02p25130 Brassica napus HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
BolC2t08592H Brassica oleracea HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
BraA02t06590Z Brassica rapa HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
Cpa.g.sc1.245 Carica papaya HOM05D005486 ORTHO05D007411 2.6e-17 93.6 42 100.0
Ca_07880_v3 Cicer arietinum L. HOM05D005486 ORTHO05D007411 2.6e-17 93.6 54 77.8
DCAR_009846 Daucus carota HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
Eucgr.G02380 Eucalyptus grandis HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 93.0
Thhalv10018020m.g Eutrema salsugineum HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
THA.LOC104801666 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 2.6e-17 93.6 43 95.3
VMungo1215G0217 Vigna mungo HOM05D005486 ORTHO05D007411 2.6e-17 93.6 42 100.0
MSTRG.13492 Avicennia marina HOM05D005486 ORTHO05D007411 3.3e-17 93.2 43 95.3
Cc11_g10960 Coffea canephora HOM05D005486 ORTHO05D007411 3.3e-17 93.2 43 95.3
Migut.E00279 Erythranthe guttata HOM05D005486 ORTHO05D007411 3.3e-17 93.2 43 95.3
Oeu056581.1 Olea europaea HOM05D005486 ORTHO05D007411 3.3e-17 93.2 43 95.3
Prupe.1G301600 Prunus persica HOM05D005486 ORTHO05D007411 3.3e-17 93.2 43 95.3
Rhsim09G0115000 Rhododendron simsii HOM05D005486 ORTHO05D007411 3.3e-17 93.2 43 95.3
TAR629G0806 Trochodendron aralioides HOM05D005486 ORTHO05D007411 3.3e-17 93.2 43 93.0
vmacro10503 Vaccinium macrocarpon HOM05D005486 ORTHO05D007411 3.3e-17 93.2 43 95.3
Carub.0002s1526 Capsella rubella HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 95.3
CARHR061530 Cardamine hirsuta HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 95.3
Dinv16542 Davidia involucrata HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 93.0
HanXRQChr16g0527001 Helianthus annuus HOM05D005486 ORTHO05D007411 4.4e-17 92.8 42 97.6
Hma1.2p1_1391F.1_g280160 Hydrangea macrophylla HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 93.0
Lj6A769T91 Lonicera japonica HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 93.0
Lj2g0014013 Lotus japonicus HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 93.0
MD13G1050300 Malus domestica HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 93.0
MD16G1051000 Malus domestica HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 93.0
THA.LOC104808436 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 4.4e-17 92.8 43 95.3
Cfa008789 Carpinus fangiana HOM05D005486 ORTHO05D007411 5.7e-17 92.4 43 95.3
ECA234G1298 Erigeron canadensis HOM05D005486 ORTHO05D007411 5.7e-17 92.4 42 97.6
Sabra10G0101300 Salix brachista HOM05D005486 ORTHO05D007411 5.7e-17 92.4 43 95.3
TWI31G0478 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 5.7e-17 92.4 43 95.3
TWI79G0683 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 5.7e-17 92.4 43 95.3
TAR622G0197 Trochodendron aralioides HOM05D005486 ORTHO05D007411 5.7e-17 92.4 43 90.7
Ah.02g127300 Amaranthus hybridus HOM05D005486 ORTHO05D007411 7.5e-17 92.0 43 95.3
arahy.Tifrunner.gnm1.ann1.HYI70A Arachis hypogaea HOM05D005486 ORTHO05D007411 7.5e-17 92.0 42 95.2
arahy.Tifrunner.gnm1.ann1.S5RRBC Arachis hypogaea HOM05D005486 ORTHO05D007411 7.5e-17 92.0 42 95.2
CiPaw.05G117000 Carya illinoinensis HOM05D005486 ORTHO05D007411 7.5e-17 92.0 43 93.0
AUR62002956 Chenopodium quinoa HOM05D005486 ORTHO05D007411 7.5e-17 92.0 43 95.3
AUR62007761 Chenopodium quinoa HOM05D005486 ORTHO05D007411 7.5e-17 92.0 43 95.3
Lalb_Chr17g0341801 Lupinus albus HOM05D005486 ORTHO05D007411 7.5e-17 92.0 43 93.0
Manes.06G075700 Manihot esculenta HOM05D005486 ORTHO05D007411 7.5e-17 92.0 43 95.3
Nitab4.5_0003073g0050 Nicotiana tabacum HOM05D005486 ORTHO05D007411 7.5e-17 92.0 42 95.2
Sp5g23820 Schrenkiella parvula HOM05D005486 ORTHO05D007411 7.5e-17 92.0 43 93.0
QL03p044642 Quercus lobata HOM05D005486 ORTHO05D007411 9.7e-17 91.7 42 97.6
Sc14g0007640 Simmondsia chinensis HOM05D005486 ORTHO05D007411 9.7e-17 91.7 43 95.3
Aqoxy3G03843 Aquilegia oxysepala HOM05D005486 ORTHO05D007411 1.3e-16 91.3 43 93.0
Potri.008G111100 Populus trichocarpa HOM05D005486 ORTHO05D007411 1.3e-16 91.3 43 93.0
RcHm_v2.0_Chr4g0436391 Rosa chinensis HOM05D005486 ORTHO05D007411 1.3e-16 91.3 43 90.7
unitig_27.g25227 Utricularia gibba HOM05D005486 ORTHO05D007411 1.3e-16 91.3 43 93.0
Zm00001eb382160 Zea mays HOM05D005486 ORTHO05D007411 1.3e-16 91.3 43 93.0
ClCG00G003720 Citrullus lanatus HOM05D005486 ORTHO05D007411 1.7e-16 90.9 43 93.0
ClCG05G023220 Citrullus lanatus HOM05D005486 ORTHO05D007411 1.7e-16 90.9 43 93.0
Ciclev10030527m.g Citrus clementina HOM05D005486 ORTHO05D007411 1.7e-16 90.9 43 90.7
MELO3C012197.2 Cucumis melo HOM05D005486 ORTHO05D007411 1.7e-16 90.9 43 93.0
CsaV3_5G033800 Cucumis sativus L. HOM05D005486 ORTHO05D007411 1.7e-16 90.9 43 93.0
Lsat_1_v5_gn_4_20360 Lactuca sativa HOM05D005486 ORTHO05D007411 1.7e-16 90.9 42 95.2
MBI16_g36049_MAGBIO Magnolia biondii HOM05D005486 ORTHO05D007411 1.7e-16 90.9 42 92.9
Os06g0489500 Oryza sativa ssp. japonica HOM05D005486 ORTHO05D007411 1.7e-16 90.9 43 90.7
Actinidia32432 Actinidia chinensis HOM05D005486 ORTHO05D014301 2.2e-16 90.5 50 78.0
CANSAT64G2054 Cannabis sativa HOM05D005486 ORTHO05D007411 2.2e-16 90.5 42 95.2
Sed0017603 Sechium edule HOM05D005486 ORTHO05D007411 2.2e-16 90.5 43 90.7
EL10Ac6g14546 Beta vulgaris HOM05D005486 ORTHO05D007411 2.8e-16 90.1 43 93.0
Peaxi162Scf00198g00414 Petunia axillaris HOM05D005486 ORTHO05D007411 2.8e-16 90.1 41 95.1
Sc04g0006910 Simmondsia chinensis HOM05D005486 ORTHO05D007411 2.8e-16 90.1 42 97.6
CSS0021505 Camellia sinensis var. sinensis HOM05D005486 ORTHO05D007411 3.7e-16 89.7 43 90.7
MD13G1050100 Malus domestica HOM05D005486 ORTHO05D007411 3.7e-16 89.7 43 90.7
Medtr4g012000 Medicago truncatula HOM05D005486 ORTHO05D007411 3.7e-16 89.7 43 90.7
Sabra08G0084000 Salix brachista HOM05D005486 ORTHO05D007411 3.7e-16 89.7 43 93.0
SalBow4G2696 Salvia bowleyana HOM05D033311 ORTHO05D014301 3.7e-16 89.7 83 62.7
SGA_v2.0_scaffold59G20635 Striga asiatica HOM05D005486 ORTHO05D007411 3.7e-16 89.7 43 90.7
Atru.chr11.1428 Acer truncatum HOM05D005486 ORTHO05D007411 4.8e-16 89.4 43 90.7
ATR0618G023 Amborella trichopoda HOM05D005486 ORTHO05D007411 4.8e-16 89.4 42 90.5
PSO063G5162 Papaver somniferum HOM05D005486 ORTHO05D007411 4.8e-16 89.4 43 88.4
PSO782G0099 Papaver somniferum HOM05D005486 ORTHO05D007411 4.8e-16 89.4 43 88.4
Actinidia16599 Actinidia chinensis HOM05D005486 ORTHO05D007411 6.3e-16 89.0 43 88.4
FvH4_4g28440 Fragaria vesca HOM05D005486 ORTHO05D007411 8.3e-16 88.6 43 88.4
FAN07G1378 Fragaria x ananassa HOM05D005486 ORTHO05D007411 8.3e-16 88.6 43 88.4
FAN12G0975 Fragaria x ananassa HOM05D005486 ORTHO05D007411 8.3e-16 88.6 43 88.4
FAN17G1167 Fragaria x ananassa HOM05D005486 ORTHO05D007411 8.3e-16 88.6 43 88.4
TPR.G24201 Trifolium pratense HOM05D005486 ORTHO05D007411 1.1e-15 88.2 43 88.4
Psat2g089040 Pisum sativum HOM05D005486 ORTHO05D007411 1.4e-15 87.8 43 88.4
SEGI_38327 Sequoiadendron giganteum HOM05D005486 ORTHO05D007411 4.1e-15 86.3 45 84.4
FAN22G2135 Fragaria x ananassa HOM05D005486 ORTHO05D007411 7.0e-15 85.5 42 85.7
CDE03G0168 Ceratophyllum demersum HOM05D005486 ORTHO05D007411 9.1e-15 85.1 43 86.0
CDE04G2499 Ceratophyllum demersum HOM05D005486 ORTHO05D007411 9.1e-15 85.1 43 86.0
MCO07G010 Micromonas commoda HOM05D005486 ORTHO05D007411 4.5e-14 82.8 43 79.1
Pp3c9_12190 Physcomitrium patens HOM05D005486 ORTHO05D007411 3.8e-13 79.7 43 79.1
SalBow7G0006 Salvia bowleyana HOM05D003746 ORTHO05D002591 4.2e-12 76.3 135 45.2
SalBow1G4341 Salvia bowleyana HOM05D007921 ORTHO05D014301 7.2e-12 75.5 58 69.0
Mapoly0072s0096 Marchantia polymorpha HOM05D005486 ORTHO05D007411 1.2e-11 74.7 42 71.4
SalBow1G1846 Salvia bowleyana HOM05D007921 ORTHO05D010172 4.7e-11 72.8 96 49.0
Cre13.g573300 Chlamydomonas reinhardtii HOM05D005486 ORTHO05D007411 4.0e-10 69.7 42 69.0
HanXRQChr08g0214571 Helianthus annuus HOM05D005486 ORTHO05D007411 7.5e-09 65.5 31 90.3
PRCOL_00006665 Prasinoderma coloniale HOM05D005486 ORTHO05D007411 9.8e-09 65.1 42 64.3
SalBow6G6864 Salvia bowleyana HOM05D033311 ORTHO05D014301 2.2e-08 63.9 181 37.0
SalBow1G3393 Salvia bowleyana HOM05D029492 ORTHO05D014301 3.7e-08 63.2 69 59.4
SalBow7G0991 Salvia bowleyana HOM05D020673 ORTHO05D014301 3.1e-07 60.1 123 41.5


User provided reference genes

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