Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 8.6e-72 273.5 131 100.0
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 4.3e-71 271.2 131 99.2
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 7.5e-60 233.8 127 85.0
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 2.7e-57 225.3 130 79.2
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 7.8e-57 223.8 130 76.9
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 3.9e-56 221.5 129 76.7
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 5.1e-56 221.1 131 77.9
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 5.1e-56 221.1 131 77.9
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 6.6e-56 220.7 131 77.9
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 1.5e-55 219.5 127 77.2
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.9e-55 219.2 129 76.0
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 5.6e-55 217.6 129 76.7
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 5.6e-55 217.6 130 78.5
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 9.5e-55 216.9 129 78.3
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 9.5e-55 216.9 129 78.3
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.2e-54 216.5 129 77.5
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 6.2e-54 214.2 131 74.8
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 6.2e-54 214.2 129 77.5
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 6.2e-54 214.2 129 74.4
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 8.1e-54 213.8 127 77.2
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 1.1e-53 213.4 125 80.0
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.1e-53 213.4 128 76.6
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.4e-53 213.0 131 75.6
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.8e-53 212.6 128 74.2
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 3.1e-53 211.8 127 76.4
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 3.1e-53 211.8 131 74.8
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 3.1e-53 211.8 132 73.5
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 4.0e-53 211.5 131 74.8
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.0e-53 211.5 131 75.6
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 5.2e-53 211.1 131 74.8
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 8.9e-53 210.3 128 74.2
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 8.9e-53 210.3 129 76.7
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.2e-52 209.9 129 74.4
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 1.2e-52 209.9 129 74.4
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 1.2e-52 209.9 128 75.8
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.5e-52 209.5 128 73.4
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.5e-52 209.5 128 76.6
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.0e-52 209.1 129 75.2
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 2.0e-52 209.1 129 75.2
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 2.0e-52 209.1 132 72.0
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 4.4e-52 208.0 128 73.4
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 4.4e-52 208.0 129 74.4
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 1.3e-51 206.5 129 72.9
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 1.3e-51 206.5 130 75.4
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 1.7e-51 206.1 129 72.1
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 2.2e-51 205.7 126 75.4
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.2e-51 205.7 129 74.4
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 2.2e-51 205.7 129 72.9
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 2.2e-51 205.7 129 73.6
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 2.9e-51 205.3 129 74.4
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 3.7e-51 204.9 126 76.2
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.7e-51 204.9 119 80.7
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 3.7e-51 204.9 128 74.2
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 4.9e-51 204.5 131 72.5
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 4.9e-51 204.5 129 73.6
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 4.9e-51 204.5 129 72.9
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.1e-50 203.4 126 74.6
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 1.4e-50 203.0 128 74.2
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 1.4e-50 203.0 128 74.2
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.4e-50 203.0 127 74.0
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 2.4e-50 202.2 127 71.7
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 7.1e-50 200.7 128 72.7
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 7.1e-50 200.7 128 71.1
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 1.2e-49 199.9 128 72.7
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 1.2e-49 199.9 127 70.1
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 1.2e-49 199.9 128 70.3
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 1.2e-49 199.9 128 71.9
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 4.6e-49 198.0 127 71.7
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 6.0e-49 197.6 126 72.2
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 6.0e-49 197.6 126 72.2
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 6.0e-49 197.6 127 71.7
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 6.0e-49 197.6 127 71.7
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 6.0e-49 197.6 127 71.7
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 6.0e-49 197.6 127 71.7
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 6.0e-49 197.6 127 71.7
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 6.0e-49 197.6 129 71.3
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 7.8e-49 197.2 128 69.5
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 1.0e-48 196.8 127 71.7
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 1.3e-48 196.4 128 71.1
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 1.3e-48 196.4 124 71.8
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 2.3e-48 195.7 125 69.6
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 3.9e-48 194.9 128 68.8
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 6.6e-48 194.1 126 70.6
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 8.6e-48 193.7 126 68.3
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 8.6e-48 193.7 127 68.5
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.5e-47 193.0 126 69.8
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.9e-47 192.6 124 71.8
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 5.6e-47 191.0 129 66.7
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 7.3e-47 190.7 165 58.8
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.4e-45 186.4 126 66.7
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.4e-45 186.4 127 63.8
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 2.4e-45 185.7 115 71.3
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 3.1e-45 185.3 123 69.1
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 8.9e-45 183.7 125 65.6
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 2.6e-44 182.2 113 73.5
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 4.2e-42 174.9 126 65.9
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 7.8e-41 170.6 128 60.9
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.3e-40 169.9 129 58.9
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 4.8e-38 161.4 125 56.0
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 7.6e-36 154.1 92 77.2
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 2.9e-35 152.1 125 53.6
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 4.3e-31 138.3 129 51.2
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 7.4e-31 137.5 129 51.2
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 1.3e-30 136.7 111 55.9
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 9.0e-29 130.6 80 75.0
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 5.8e-28 127.9 116 53.4
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 9.9e-28 127.1 155 45.2
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 1.6e-25 119.8 75 78.7
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 1.8e-24 116.3 81 69.1
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 3.8e-19 98.6 55 72.7
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 2.7e-17 92.4 68 66.2
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 1.3e-16 90.1 52 71.2
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.1e-15 87.0 58 60.3
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 4.8e-14 81.6 53 67.9
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 4.8e-14 81.6 54 63.0
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.8e-06 55.8 43 58.1
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.2e-06 54.3 43 55.8


User provided reference genes

Program Settings