Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 5.6e-32 140.6 84 100.0
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 9.2e-27 123.2 84 92.9
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 9.2e-27 123.2 79 96.2
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 3.0e-25 118.2 61 98.4
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 3.9e-17 91.3 61 70.5
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 1.9e-16 89.0 59 71.2
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.3e-16 87.8 46 89.1
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 9.5e-16 86.7 58 74.1
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 9.5e-16 86.7 59 69.5
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 1.2e-15 86.3 59 67.8
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 1.1e-14 83.2 59 64.4
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 3.1e-14 81.6 61 60.7
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 4.0e-14 81.3 59 64.4
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 4.0e-14 81.3 58 62.1
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 6.8e-14 80.5 59 61.0
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 6.8e-14 80.5 59 59.3
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.2e-13 79.7 59 59.3
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 1.5e-13 79.3 56 69.6
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 2.0e-13 79.0 59 59.3
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 2.0e-13 79.0 61 54.1
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 2.0e-13 79.0 56 67.9
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 2.6e-13 78.6 56 67.9
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 2.6e-13 78.6 59 59.3
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 5.8e-13 77.4 59 61.0
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 5.8e-13 77.4 61 57.4
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 1.3e-12 76.3 57 66.7
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.7e-12 75.9 61 52.5
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 1.7e-12 75.9 55 60.0
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 1.7e-12 75.9 70 54.3
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 2.2e-12 75.5 62 58.1
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 2.9e-12 75.1 56 58.9
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 2.9e-12 75.1 57 57.9
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 3.8e-12 74.7 61 55.7
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 4.9e-12 74.3 57 56.1
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 8.4e-12 73.6 57 63.2
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 8.4e-12 73.6 57 63.2
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 2.4e-11 72.0 60 58.3
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 2.4e-11 72.0 60 61.7
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 2.4e-11 72.0 57 54.4
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 3.2e-11 71.6 60 55.0
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 4.1e-11 71.2 60 60.0
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 5.4e-11 70.9 56 55.4
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 7.1e-11 70.5 57 61.4
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 9.2e-11 70.1 62 53.2
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 2.1e-10 68.9 51 60.8
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 2.1e-10 68.9 55 52.7
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 2.1e-10 68.9 51 58.8
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 2.7e-10 68.6 62 54.8
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 2.7e-10 68.6 53 56.6
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 3.5e-10 68.2 62 53.2
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 4.6e-10 67.8 62 53.2
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 4.6e-10 67.8 62 53.2
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 4.6e-10 67.8 62 53.2
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.0e-09 66.6 49 57.1
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 1.7e-09 65.9 62 51.6
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.7e-09 65.9 57 56.1
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.7e-09 65.9 57 56.1
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 1.7e-09 65.9 62 51.6
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 5.1e-09 64.3 53 54.7
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 5.1e-09 64.3 60 53.3
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 8.7e-09 63.5 57 54.4
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 8.7e-09 63.5 52 51.9
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 1.1e-08 63.2 61 45.9
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 1.1e-08 63.2 60 48.3
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 1.5e-08 62.8 47 61.7
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 1.9e-08 62.4 53 54.7
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 3.3e-08 61.6 51 52.9
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 4.3e-08 61.2 47 57.4
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 4.3e-08 61.2 53 50.9
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 9.6e-08 60.1 74 45.9
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 9.6e-08 60.1 47 53.2
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 9.6e-08 60.1 57 52.6
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.2e-07 59.7 58 48.3
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 3.6e-07 58.2 51 47.1
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 4.7e-07 57.8 57 45.6
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 1.1e-06 56.6 43 60.5
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 1.4e-06 56.2 51 47.1
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 3.1e-06 55.1 44 52.3
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 4.0e-06 54.7 62 41.9
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 9.0e-06 53.5 48 56.2


User provided reference genes

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