Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.5e-172 607.1 341 100.0
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.4e-168 594.7 316 99.4
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 6.2e-122 441.4 348 68.1
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 2.9e-119 432.6 357 67.2
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 2.4e-118 429.5 350 66.3
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 4.2e-118 428.7 353 66.9
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 7.9e-109 397.9 326 66.0
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 1.3e-108 397.1 313 65.2
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 5.1e-108 395.2 367 59.9
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 3.3e-107 392.5 363 60.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.8e-105 386.7 363 60.3
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 6.9e-105 384.8 363 60.3
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 6.9e-105 384.8 363 60.3
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 1.7e-103 380.2 337 62.3
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 6.0e-101 371.7 329 60.8
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 6.0e-101 371.7 370 58.9
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.0e-100 370.9 330 60.0
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.8e-100 370.2 329 59.9
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 7.4e-99 364.8 366 57.1
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 3.7e-98 362.5 362 55.2
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 6.2e-98 361.7 359 56.8
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 6.2e-98 361.7 362 55.2
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 2.4e-97 359.8 341 58.4
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 1.5e-96 357.1 373 54.7
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 2.6e-96 356.3 355 56.3
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.4e-96 355.9 362 55.5
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 4.5e-96 355.5 363 57.0
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 4.5e-96 355.5 334 60.5
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.0e-95 354.4 351 57.0
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 1.7e-95 353.6 363 55.9
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.7e-95 353.6 363 55.9
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 2.2e-95 353.2 328 62.2
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 3.8e-95 352.4 353 57.5
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 3.8e-95 352.4 365 56.4
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 6.5e-95 351.7 359 55.2
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.1e-94 350.9 361 54.3
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.1e-94 350.9 351 57.3
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 3.2e-94 349.4 351 55.0
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 3.2e-94 349.4 331 58.9
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.2e-93 347.4 355 55.2
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.6e-93 347.1 353 55.5
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 2.7e-93 346.3 347 54.8
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 4.6e-93 345.5 355 54.6
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.3e-92 344.0 387 53.2
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 1.3e-92 344.0 362 53.6
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 3.0e-92 342.8 364 52.2
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 3.0e-92 342.8 344 55.2
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 6.7e-92 341.7 360 55.3
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 1.9e-91 340.1 354 55.6
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.9e-91 340.1 358 53.6
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.9e-91 340.1 364 52.2
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 3.3e-91 339.3 347 53.9
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 4.3e-91 339.0 353 54.1
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 5.7e-91 338.6 366 54.4
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.6e-90 337.0 353 52.7
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 2.1e-90 336.7 358 53.1
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.1e-90 336.7 359 53.8
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 2.1e-90 336.7 358 55.0
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.8e-90 336.3 354 55.1
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 2.8e-90 336.3 358 53.9
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 3.7e-90 335.9 347 54.8
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 4.8e-90 335.5 349 55.3
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 6.3e-90 335.1 359 53.5
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 6.3e-90 335.1 359 53.2
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 2.4e-89 333.2 373 51.2
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 9.0e-89 331.3 362 52.8
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.2e-88 330.9 412 50.2
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.4e-88 329.3 315 55.9
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 7.6e-88 328.2 373 51.2
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.3e-87 327.4 351 53.6
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.7e-87 327.0 351 53.6
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.1e-86 324.3 351 53.0
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 5.5e-86 322.0 347 53.0
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 2.7e-85 319.7 349 53.9
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 7.9e-85 318.2 350 53.7
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 3.0e-84 316.2 342 54.7
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 3.3e-83 312.8 328 54.9
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 2.2e-82 310.1 344 53.2
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-81 307.8 284 59.5
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 3.1e-81 306.2 367 51.5
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 4.1e-81 305.8 352 49.4
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 6.9e-81 305.1 361 49.3
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.1e-78 297.7 345 51.0
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 1.1e-78 297.7 366 47.3
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.0e-76 291.2 354 47.7
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 3.3e-75 286.2 358 48.3
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-75 285.4 247 62.8
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.4e-73 280.0 254 60.6
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.1e-73 279.3 256 60.2
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 9.1e-73 278.1 260 58.5
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.7e-71 273.9 306 46.4
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.9e-70 270.4 215 67.0
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.4e-70 268.1 215 66.5
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.4e-70 268.1 215 66.5
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.4e-70 268.1 215 66.5
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 4.1e-65 252.7 371 42.3
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 1.2e-64 251.1 182 70.3
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 1.5e-59 234.2 304 43.4
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 1.6e-56 224.2 341 41.9
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.6e-53 214.2 303 43.2
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 4.7e-53 212.6 149 73.2
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 6.1e-53 212.2 276 44.2
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 7.5e-51 205.3 300 43.0
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 7.5e-51 205.3 179 62.6
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 3.0e-44 183.3 250 47.2
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 6.1e-37 159.1 184 51.1
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 2.0e-35 154.1 381 31.8
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 9.5e-30 135.2 214 42.1
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 5.2e-28 129.4 83 75.9
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.2e-26 124.0 127 53.5
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.2e-20 102.8 139 38.1
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.9e-14 84.3 67 62.7
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-12 77.4 72 62.5
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-12 77.4 72 62.5
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-12 77.4 72 62.5
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.9e-10 70.5 96 41.7
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 1.7e-07 61.2 47 63.8
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 3.9e-07 60.1 59 55.9
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.1e-06 58.5 152 28.9


User provided reference genes

Program Settings