Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.3e-180 636.3 335 100.0
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.4e-179 630.9 338 99.1
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 3.4e-149 531.9 355 82.0
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 5.9e-141 504.6 320 81.6
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.3e-140 503.4 327 82.0
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 6.5e-140 501.1 362 75.1
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 6.5e-140 501.1 363 74.9
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 9.3e-139 497.3 332 79.2
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.6e-138 496.5 327 81.0
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 6.1e-138 494.6 317 82.0
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 5.1e-137 491.5 327 79.8
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 1.5e-136 490.0 320 80.0
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 3.3e-136 488.8 320 81.6
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 4.3e-136 488.4 353 72.8
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 6.3e-135 484.6 319 79.9
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 8.2e-135 484.2 352 73.3
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 8.2e-135 484.2 353 72.8
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 1.1e-134 483.8 350 74.3
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 1.4e-134 483.4 323 79.6
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 1.8e-134 483.0 320 78.1
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 4.1e-134 481.9 352 73.0
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 9.1e-134 480.7 354 73.4
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 1.2e-133 480.3 303 82.8
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 1.2e-133 480.3 303 82.8
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 2.6e-133 479.2 320 80.3
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 2.6e-133 479.2 326 77.6
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 3.4e-133 478.8 327 78.6
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 4.5e-133 478.4 326 77.3
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 4.5e-133 478.4 289 86.5
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 4.5e-133 478.4 319 79.6
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 7.7e-133 477.6 300 83.3
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 7.7e-133 477.6 293 85.3
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 1.3e-132 476.9 328 78.0
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 1.7e-132 476.5 321 79.4
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 1.7e-132 476.5 300 83.0
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 2.9e-132 475.7 296 83.1
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 5.0e-132 474.9 324 77.5
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 6.5e-132 474.6 300 82.7
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 1.9e-131 473.0 300 81.7
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 1.9e-131 473.0 299 81.6
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 2.5e-131 472.6 300 82.7
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 3.2e-131 472.2 330 78.5
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 9.4e-131 470.7 319 76.8
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 2.7e-130 469.2 300 82.3
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.6e-130 468.8 319 76.8
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 6.1e-130 468.0 301 81.4
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 3.0e-129 465.7 314 78.3
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 3.0e-129 465.7 321 77.3
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 5.1e-129 464.9 334 74.0
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 6.7e-129 464.5 356 70.8
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 8.8e-129 464.2 356 70.2
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 4.4e-128 461.8 317 75.7
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 7.4e-128 461.1 318 75.2
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 2.2e-127 459.5 318 75.5
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 2.2e-127 459.5 318 74.8
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 2.2e-127 459.5 319 76.8
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 3.7e-127 458.8 351 70.4
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 1.4e-126 456.8 318 74.8
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 1.4e-126 456.8 315 77.5
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 2.4e-126 456.1 319 76.5
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 4.1e-126 455.3 306 78.8
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 6.9e-126 454.5 348 69.8
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 6.9e-126 454.5 348 69.8
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 6.9e-126 454.5 320 73.4
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 6.9e-126 454.5 341 71.0
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 6.9e-126 454.5 309 78.6
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 9.1e-126 454.1 292 81.5
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 1.2e-125 453.8 346 70.5
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 1.2e-125 453.8 352 70.2
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 1.5e-125 453.4 319 74.6
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 1.5e-125 453.4 348 69.5
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 2.6e-125 452.6 355 70.4
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 1.0e-124 450.7 319 74.6
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 1.3e-124 450.3 318 75.5
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 1.1e-123 447.2 286 80.1
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 1.2e-122 443.7 334 72.5
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 4.7e-122 441.8 261 86.2
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 1.8e-121 439.9 360 68.1
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 6.7e-121 438.0 326 73.6
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 8.8e-121 437.6 320 73.4
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 4.4e-120 435.3 293 78.8
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 7.4e-120 434.5 330 71.5
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 1.3e-119 433.7 307 75.9
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 1.7e-119 433.3 353 67.7
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 6.3e-119 431.4 296 78.4
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 2.4e-118 429.5 307 75.2
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 2.6e-117 426.0 315 71.1
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 2.6e-117 426.0 266 82.0
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 5.9e-117 424.9 331 69.8
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 5.9e-117 424.9 351 67.5
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 1.0e-116 424.1 242 90.9
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 4.2e-115 418.7 308 72.1
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 1.8e-113 413.3 292 74.3
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 6.7e-113 411.4 315 69.2
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 1.2e-112 410.6 316 69.3
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 7.5e-112 407.9 304 70.4
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 9.7e-112 407.5 316 69.3
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 1.3e-111 407.1 316 69.3
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 1.7e-111 406.8 308 71.1
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 2.8e-111 406.0 316 69.0
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 4.8e-111 405.2 308 70.8
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 4.8e-111 405.2 320 68.4
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.2e-111 404.4 316 69.3
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 4.1e-110 402.1 283 73.5
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 5.3e-110 401.7 287 73.9
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 2.0e-109 399.8 315 68.3
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 2.5e-107 392.9 317 66.6
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 2.5e-107 392.9 288 70.5
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 1.6e-106 390.2 286 71.7
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 2.1e-106 389.8 291 71.8
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 3.6e-106 389.0 263 75.7
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 4.7e-106 388.7 310 66.5
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 1.0e-105 387.5 260 76.2
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 1.4e-102 377.1 329 60.8
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 2.7e-101 372.9 351 61.3
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 1.1e-99 367.5 319 64.3
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 5.5e-99 365.2 316 64.6
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 5.5e-99 365.2 269 74.0
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 1.1e-94 350.9 248 73.0
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 2.3e-89 333.2 252 66.3
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 1.0e-84 317.8 254 67.7
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 1.7e-84 317.0 252 63.1
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 1.1e-83 314.3 177 94.9
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 1.6e-74 283.9 249 59.0
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 1.2e-72 277.7 193 74.6
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 1.4e-70 270.8 297 57.2
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 5.1e-68 262.3 191 75.4
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 1.9e-51 207.2 157 69.4
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 5.1e-44 182.6 124 68.5
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 7.4e-43 178.7 103 90.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 3.9e-36 156.4 103 79.6
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 3.9e-36 156.4 103 79.6
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 9.0e-33 145.2 103 70.9
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 5.9e-24 115.9 225 40.9
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 2.1e-21 107.5 192 33.3
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 1.8e-20 104.4 63 82.5
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 2.7e-13 80.5 43 86.0


User provided reference genes

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