Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0010 Salvia bowleyana HOM05D008044 ORTHO05D010106 9.1e-86 320.1 149 100.0
Migut.F00176 Erythranthe guttata HOM05D008044 ORTHO05D010106 2.6e-56 222.2 164 66.5
SGA_v2.0_scaffold44G16829 Striga asiatica HOM05D008044 ORTHO05D010106 2.3e-52 209.1 165 61.8
MSTRG.8632 Avicennia marina HOM05D008044 ORTHO05D010106 1.5e-51 206.5 164 62.2
Gohir.A03G051500 Gossypium hirsutum HOM05D008044 ORTHO05D010106 2.5e-51 205.7 162 61.7
Gohir.D03G116200 Gossypium hirsutum HOM05D008044 ORTHO05D010106 5.6e-51 204.5 162 61.7
Gorai.003G122500 Gossypium raimondii HOM05D008044 ORTHO05D010106 5.6e-51 204.5 162 61.7
CAN.G481.61 Capsicum annuum HOM05D008044 ORTHO05D010106 1.4e-49 199.9 161 58.4
Nitab4.5_0008197g0010 Nicotiana tabacum HOM05D008044 ORTHO05D010106 6.8e-49 197.6 158 59.5
PGSC0003DMG400018537 Solanum tuberosum HOM05D008044 ORTHO05D010106 2.6e-48 195.7 163 60.7
DCAR_020347 Daucus carota HOM05D008044 ORTHO05D010106 1.3e-47 193.4 166 59.0
Dinv35361 Davidia involucrata HOM05D008044 ORTHO05D010106 1.3e-47 193.4 170 58.8
Lsat_1_v5_gn_2_135221 Lactuca sativa HOM05D008044 ORTHO05D010106 1.3e-47 193.4 169 55.6
Manes.01G037300 Manihot esculenta HOM05D008044 ORTHO05D010106 1.3e-47 193.4 170 59.4
Solyc03g082670.3 Solanum lycopersicum HOM05D008044 ORTHO05D010106 2.2e-47 192.6 163 60.1
Cc02_g01150 Coffea canephora HOM05D008044 ORTHO05D010106 1.9e-46 189.5 166 57.8
Dinv29244 Davidia involucrata HOM05D008044 ORTHO05D010106 2.7e-45 185.7 169 58.0
Duzib205G1586 Durio zibethinus HOM05D008044 ORTHO05D010106 2.7e-45 185.7 165 56.4
HanXRQChr04g0100441 Helianthus annuus HOM05D008044 ORTHO05D010106 3.5e-45 185.3 162 56.2
Ciclev10022664m.g Citrus clementina HOM05D008044 ORTHO05D010106 6.0e-45 184.5 160 58.1
Thecc.03G204500 Theobroma cacao HOM05D008044 ORTHO05D010106 7.8e-45 184.1 168 56.0
Sabra15G0006200 Salix brachista HOM05D002361 ORTHO05D002843 1.7e-44 183.0 167 55.1
arahy.Tifrunner.gnm1.ann1.QU8WMY Arachis hypogaea HOM05D008044 ORTHO05D010106 2.3e-44 182.6 169 54.4
GSVIVG01038604001 Vitis vinifera HOM05D008044 ORTHO05D010106 2.3e-44 182.6 170 57.6
MELO3C019381.2 Cucumis melo HOM05D008044 ORTHO05D010106 3.9e-44 181.8 170 55.3
Phvul.009G048200 Phaseolus vulgaris HOM05D008044 ORTHO05D010106 3.9e-44 181.8 166 54.2
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 5.0e-44 181.4 171 52.0
Sed0010771 Sechium edule HOM05D008044 ORTHO05D010106 8.6e-44 180.6 170 54.1
arahy.Tifrunner.gnm1.ann1.4AVA7A Arachis hypogaea HOM05D008044 ORTHO05D010106 1.5e-43 179.9 169 53.8
CsaV3_3G019660 Cucumis sativus L. HOM05D008044 ORTHO05D010106 1.9e-43 179.5 170 54.7
AUR62035573 Chenopodium quinoa HOM05D008044 ORTHO05D010106 3.3e-43 178.7 168 54.8
TAR636G0016 Trochodendron aralioides HOM05D008044 ORTHO05D010106 3.3e-43 178.7 168 56.5
Eucgr.A01433 Eucalyptus grandis HOM05D008044 ORTHO05D010106 4.3e-43 178.3 164 54.9
CSS0007407 Camellia sinensis var. sinensis HOM05D008044 ORTHO05D010106 5.6e-43 177.9 167 55.7
Psat5g074880 Pisum sativum HOM05D008044 ORTHO05D010106 5.6e-43 177.9 169 53.8
Lalb_Chr23g0271711 Lupinus albus HOM05D008044 ORTHO05D010106 9.5e-43 177.2 168 54.2
Medtr3g092020 Medicago truncatula HOM05D008044 ORTHO05D010106 1.2e-42 176.8 169 53.3
PSO063G1947 Papaver somniferum HOM05D008044 ORTHO05D010106 1.2e-42 176.8 169 55.0
Glyma.04G232600 Glycine max HOM05D008044 ORTHO05D010106 1.6e-42 176.4 172 52.9
Sc25g0000980 Simmondsia chinensis HOM05D008044 ORTHO05D010106 1.6e-42 176.4 172 52.9
TPR.G33642 Trifolium pratense HOM05D008044 ORTHO05D010106 2.8e-42 175.6 172 52.3
Aqoxy5G02418 Aquilegia oxysepala HOM05D008044 ORTHO05D010106 3.6e-42 175.3 168 52.4
CiPaw.06G043900 Carya illinoinensis HOM05D008044 ORTHO05D010106 4.7e-42 174.9 168 54.2
Glyma.06G132400 Glycine max HOM05D008044 ORTHO05D010106 4.7e-42 174.9 172 51.7
Atru.chr12.2313 Acer truncatum HOM05D008044 ORTHO05D010106 6.2e-42 174.5 172 54.1
AUR62006056 Chenopodium quinoa HOM05D008044 ORTHO05D010106 1.1e-41 173.7 168 54.2
Zm00001eb187590 Zea mays HOM05D008044 ORTHO05D010106 8.9e-41 170.6 155 53.5
Cfa016194 Carpinus fangiana HOM05D008044 ORTHO05D010106 2.6e-40 169.1 165 55.2
PGR042G2636 Punica granatum HOM05D008044 ORTHO05D010106 2.2e-39 166.0 169 53.8
SGA_v2.0_scaffold18G08440 Striga asiatica HOM05D008044 ORTHO05D010106 2.9e-39 165.6 165 50.9
Oeu037043.1 Olea europaea HOM05D001626 ORTHO05D010106 4.9e-39 164.9 143 55.9
CANSAT21G1192 Cannabis sativa HOM05D008044 ORTHO05D010106 6.4e-39 164.5 162 53.7
Lj1g0025539 Lotus japonicus HOM05D008044 ORTHO05D010106 8.3e-39 164.1 173 48.6
Nitab4.5_0010367g0020 Nicotiana tabacum HOM05D008044 ORTHO05D010106 8.3e-39 164.1 139 56.1
QL09p007646 Quercus lobata HOM05D008044 ORTHO05D010106 8.3e-39 164.1 199 46.2
ATR0620G028 Amborella trichopoda HOM05D008044 ORTHO05D010106 9.2e-38 160.6 165 50.3
PSO782G0454 Papaver somniferum HOM05D008044 ORTHO05D010106 8.6e-36 154.1 119 63.0
EL10Ac3g05235 Beta vulgaris HOM05D008044 ORTHO05D010106 7.3e-35 151.0 142 55.6
MBI04_g11918_MAGBIO Magnolia biondii HOM05D008044 ORTHO05D010106 7.3e-35 151.0 192 46.9
Sopen03g022430 Solanum pennellii HOM05D008044 ORTHO05D010106 1.6e-34 149.8 130 60.8
ClCG05G009120 Citrullus lanatus HOM05D008044 ORTHO05D010106 2.8e-34 149.1 146 54.1
Haze_00261 Corylus avellana HOM05D008044 ORTHO05D010106 1.8e-33 146.4 137 54.7
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 3.1e-33 145.6 141 52.5
SEGI_00721 Sequoiadendron giganteum HOM05D008044 ORTHO05D010106 3.1e-33 145.6 182 41.2
Actinidia08675 Actinidia chinensis HOM05D008044 ORTHO05D010106 1.5e-32 143.3 137 52.6
Ca_16735_v3 Cicer arietinum L. HOM05D008044 ORTHO05D010106 7.6e-32 141.0 139 54.7
Peaxi162Scf00740g00427 Petunia axillaris HOM05D008044 ORTHO05D010106 8.4e-31 137.5 149 46.3
Hma1.2p1_0512F.1_g169310 Hydrangea macrophylla HOM05D008044 ORTHO05D010106 1.4e-30 136.7 136 52.9
CiPaw.05G200900 Carya illinoinensis HOM05D008044 ORTHO05D010106 3.5e-29 132.1 168 44.6
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 1.1e-27 127.1 131 50.4
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 2.1e-26 122.9 100 55.0
Ah.07g205140 Amaranthus hybridus HOM05D008044 ORTHO05D010106 3.1e-25 119.0 168 42.3
Mapoly0007s0051 Marchantia polymorpha HOM05D008044 ORTHO05D010106 2.9e-23 112.5 165 37.6
CDE02G3408 Ceratophyllum demersum HOM05D008044 ORTHO05D010106 3.8e-23 112.1 112 48.2
AagrBONN_evm.TU.Sc2ySwM_117.1515 Anthoceros agrestis HOM05D008044 ORTHO05D010106 1.9e-22 109.8 192 34.4
Os02g0686500 Oryza sativa ssp. japonica HOM05D008044 ORTHO05D010106 9.3e-22 107.5 86 55.8
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 7.8e-21 104.4 86 53.5
Lsat_1_v5_gn_9_14140 Lactuca sativa HOM05D008044 ORTHO05D010106 1.1e-19 100.5 129 41.9
ECA238G1983 Erigeron canadensis HOM05D008044 ORTHO05D010106 1.2e-13 80.5 83 49.4
Nn1g00365 Nelumbo nucifera HOM05D008044 ORTHO05D010106 2.1e-13 79.7 82 56.1
FvH4_2g37370 Fragaria vesca HOM05D005374 ORTHO05D006534 1.2e-08 63.9 125 31.2
FAN15G3753 Fragaria x ananassa HOM05D005374 ORTHO05D006534 1.2e-08 63.9 125 31.2
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 1.5e-08 63.5 126 31.0
FAN20G2320 Fragaria x ananassa HOM05D005374 ORTHO05D006534 2.0e-08 63.2 100 33.0
FAN27G3004 Fragaria x ananassa HOM05D005374 ORTHO05D006534 3.4e-08 62.4 100 33.0
RcHm_v2.0_Chr6g0304341 Rosa chinensis HOM05D005374 ORTHO05D006534 4.5e-08 62.0 130 27.7
SEGI_04185 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 4.5e-08 62.0 100 31.0
Zm00001eb227600 Zea mays HOM05D005374 ORTHO05D006534 5.8e-08 61.6 124 29.0
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 9.3e-06 54.3 79 34.2
Eucgr.E01146 Eucalyptus grandis HOM05D005374 ORTHO05D006534 9.3e-06 54.3 102 28.4
Pp3c9_17990 Physcomitrium patens HOM05D005374 ORTHO05D006534 9.3e-06 54.3 80 32.5


User provided reference genes

Program Settings