Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4296 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.5e-112 407.9 202 100.0
SalBow1G1090 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.2e-109 399.8 202 98.5
SalBow1G1799 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.5e-107 392.9 202 96.5
SalBow1G1821 Salvia bowleyana HOM05D009357 ORTHO05D011530 5.7e-91 337.8 256 72.7
SalBow1G7264 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.2e-88 330.1 163 99.4
SalBow6G4255 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.2e-88 330.1 163 99.4
SalBow2G1520 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.6e-88 329.7 162 99.4
SalBow7G4794 Salvia bowleyana HOM05D009357 ORTHO05D011530 3.5e-88 328.6 163 98.8
SalBow1G1656 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.5e-88 328.2 163 98.8
SalBow3G2989 Salvia bowleyana HOM05D009357 ORTHO05D011530 7.7e-88 327.4 163 98.2
SalBow7G0864 Salvia bowleyana HOM05D009357 ORTHO05D011530 7.7e-88 327.4 163 98.8
SalBow3G3594 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.7e-87 326.2 163 98.2
SalBow5G4022 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.7e-87 326.2 163 98.8
SalBow6G0183 Salvia bowleyana HOM05D009357 ORTHO05D011530 6.5e-87 324.3 163 97.5
SalBow8G2718 Salvia bowleyana HOM05D009357 ORTHO05D011530 5.5e-86 321.2 163 98.2
SalBow8G4496 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.2e-85 320.1 158 98.7
SalBow6G5664 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.3e-79 300.1 149 98.7
SalBow4G0278 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.9e-78 296.2 150 97.3
SalBow5G5242 Salvia bowleyana HOM05D009357 ORTHO05D011530 6.8e-76 287.7 142 99.3
SalBow3G3985 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.8e-68 263.1 163 82.2
SalBow5G4827 Salvia bowleyana HOM05D009357 ORTHO05D011530 6.4e-66 254.6 140 94.3
SalBow1G6216 Salvia bowleyana HOM05D009357 ORTHO05D011530 5.4e-65 251.5 177 74.6
SalBow1G5114 Salvia bowleyana HOM05D009357 ORTHO05D011530 3.1e-60 235.7 151 78.8
SalBow5G2056 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.0e-55 220.7 124 90.3
SalBow1G8117 Salvia bowleyana HOM05D009357 ORTHO05D011530 7.8e-48 194.5 99 99.0
Cc07_g01050 Coffea canephora HOM05D000139 ORTHO05D000103 3.4e-27 125.9 134 50.7
Migut.F00036 Erythranthe guttata HOM05D000139 ORTHO05D000103 9.3e-25 117.9 127 48.0
Nitab4.5_0005858g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 1.2e-24 117.5 140 44.3
Peaxi162Scf00420g00613 Petunia axillaris HOM05D000139 ORTHO05D000103 2.7e-24 116.3 141 44.0
Nitab4.5_0000519g0120 Nicotiana tabacum HOM05D000139 ORTHO05D000103 4.6e-24 115.5 140 43.6
CSS0020733 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 3.9e-23 112.5 139 47.5
CSS0039903 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 3.9e-23 112.5 139 47.5
unitig_88.g27697 Utricularia gibba HOM05D000139 ORTHO05D000103 1.1e-22 110.9 134 41.8
PGSC0003DMG400020200 Solanum tuberosum HOM05D000139 ORTHO05D000103 1.9e-22 110.2 141 44.0
CAN.G473.132 Capsicum annuum HOM05D000139 ORTHO05D000103 4.3e-22 109.0 139 42.4
Solyc02g094370.1 Solanum lycopersicum HOM05D000139 ORTHO05D000103 7.4e-22 108.2 141 43.3
Sopen02g039020 Solanum pennellii HOM05D000139 ORTHO05D000103 7.4e-22 108.2 141 43.3
unitig_0.g2577 Utricularia gibba HOM05D009357 ORTHO05D011530 7.4e-22 108.2 139 38.8
Oeu035360.1 Olea europaea HOM05D000139 ORTHO05D000103 1.6e-21 107.1 131 45.8
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 3.7e-21 105.9 133 45.9
Actinidia36227 Actinidia chinensis HOM05D000139 ORTHO05D000103 6.2e-21 105.1 133 45.9
Hma1.2p1_0421F.1_g150090 Hydrangea macrophylla HOM05D000139 ORTHO05D000103 1.4e-20 104.0 119 47.1
Rhsim10G0003800 Rhododendron simsii HOM05D000139 ORTHO05D000103 2.4e-20 103.2 135 45.2
Lju41C58G1 Lonicera japonica HOM05D000139 ORTHO05D000103 6.9e-20 101.7 140 43.6
Dinv33311 Davidia involucrata HOM05D000139 ORTHO05D000103 9.0e-20 101.3 136 43.4
Dinv26735 Davidia involucrata HOM05D009357 ORTHO05D011530 1.5e-19 100.5 133 42.9
CSS0029814 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 5.8e-19 98.6 127 41.7
SalBow6G1739 Salvia bowleyana HOM05D009357 ORTHO05D363483 1.7e-18 97.1 69 69.6
SGA_v2.0_scaffold44G16936 Striga asiatica HOM05D000139 ORTHO05D000103 2.9e-18 96.3 139 41.7
SalBow1G2550 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.5e-17 93.2 46 95.7
SGA_v2.0_scaffold34G13700 Striga asiatica HOM05D000139 ORTHO05D000103 2.5e-17 93.2 128 39.8
SalBow7G2522 Salvia bowleyana HOM05D000139 ORTHO05D000103 5.5e-17 92.0 138 34.8
DCAR_014490 Daucus carota HOM05D000139 ORTHO05D000103 2.7e-16 89.7 133 35.3
Nn3g16361 Nelumbo nucifera HOM05D000139 ORTHO05D001437 3.5e-16 89.4 135 36.3
Potri.017G068000 Populus trichocarpa HOM05D000139 ORTHO05D000103 2.5e-14 83.2 178 32.6
Sabra16G0208100 Salix brachista HOM05D000139 ORTHO05D000103 3.3e-14 82.8 154 37.0
TAR622G0662 Trochodendron aralioides HOM05D000139 ORTHO05D000103 7.4e-14 81.6 154 37.0
Potri.001G325600 Populus trichocarpa HOM05D000139 ORTHO05D000103 4.8e-13 79.0 149 35.6
Aa31LG11G15390 Aethionema arabicum HOM05D000139 ORTHO05D000103 1.4e-12 77.4 148 35.8
TWI32G0431 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 1.8e-12 77.0 136 36.8
TWI60G0954 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 2.4e-12 76.6 138 35.5
GSVIVG01000924001 Vitis vinifera HOM05D000139 ORTHO05D000103 5.3e-12 75.5 126 37.3
Prupe.3G310000 Prunus persica HOM05D000139 ORTHO05D000103 6.9e-12 75.1 126 39.7
CsaV3_5G024390 Cucumis sativus L. HOM05D000139 ORTHO05D000103 9.0e-12 74.7 131 33.6
QL02p070581 Quercus lobata HOM05D000139 ORTHO05D000103 1.2e-11 74.3 130 39.2
BcaB01g05322 Brassica carinata HOM05D000139 ORTHO05D000103 1.5e-11 73.9 158 34.2
Lj1g0025409 Lotus japonicus HOM05D000139 ORTHO05D000103 2.0e-11 73.6 134 37.3
BolC3t13233H Brassica oleracea HOM05D000139 ORTHO05D000103 2.6e-11 73.2 157 33.8
A03p06340 Brassica napus HOM05D000139 ORTHO05D000103 3.4e-11 72.8 157 33.8
BraA03t09964Z Brassica rapa HOM05D000139 ORTHO05D000103 3.4e-11 72.8 157 33.8
ClCG01G008690 Citrullus lanatus HOM05D000139 ORTHO05D000103 4.5e-11 72.4 131 33.6
Manes.04G087700 Manihot esculenta HOM05D000139 ORTHO05D000103 5.8e-11 72.0 160 35.0
Carub.0006s1218 Capsella rubella HOM05D000139 ORTHO05D000103 7.6e-11 71.6 152 34.2
Ciclev10018071m.g Citrus clementina HOM05D000139 ORTHO05D000103 7.6e-11 71.6 126 37.3
THA.LOC104822424 Tarenaya hassleriana HOM05D000139 ORTHO05D000103 7.6e-11 71.6 130 34.6
AT5G13990 Arabidopsis thaliana HOM05D000139 ORTHO05D000103 1.0e-10 71.2 147 34.7
Peaxi162Scf00255g00011 Petunia axillaris HOM05D000139 ORTHO05D000103 1.0e-10 71.2 118 35.6
Aa31LG5G11190 Aethionema arabicum HOM05D000139 ORTHO05D000103 1.3e-10 70.9 144 35.4
MELO3C025086.2 Cucumis melo HOM05D000139 ORTHO05D000103 1.7e-10 70.5 127 33.1
AL6G24650 Arabidopsis lyrata HOM05D000139 ORTHO05D000103 2.2e-10 70.1 147 34.7
Duzib147G0280 Durio zibethinus HOM05D000139 ORTHO05D000103 2.9e-10 69.7 132 37.1
C02p06510 Brassica napus HOM05D000139 ORTHO05D000103 3.8e-10 69.3 157 36.3
Actinidia19567 Actinidia chinensis HOM05D000139 ORTHO05D011530 6.5e-10 68.6 63 52.4
BraA02t05200Z Brassica rapa HOM05D000139 ORTHO05D000103 6.5e-10 68.6 144 37.5
Duzib187G0338 Durio zibethinus HOM05D000139 ORTHO05D000103 6.5e-10 68.6 130 38.5
Thecc.04G041800 Theobroma cacao HOM05D000139 ORTHO05D000103 6.5e-10 68.6 132 39.4
C03p07310 Brassica napus HOM05D000139 ORTHO05D000103 8.4e-10 68.2 157 33.1
Actinidia08043 Actinidia chinensis HOM05D009357 ORTHO05D023333 1.1e-09 67.8 120 33.3
Atru.chr6.2611 Acer truncatum HOM05D000139 ORTHO05D000103 1.4e-09 67.4 137 38.0
BcaNung06465 Brassica carinata HOM05D000139 ORTHO05D011530 1.4e-09 67.4 101 41.6
BolC2t06598H Brassica oleracea HOM05D000139 ORTHO05D000103 1.4e-09 67.4 152 36.8
CARHR199400 Cardamine hirsuta HOM05D000139 ORTHO05D000103 1.4e-09 67.4 150 35.3
SalBow7G0135 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.4e-09 67.4 33 93.9
Cfa009405 Carpinus fangiana HOM05D000139 ORTHO05D000103 1.9e-09 67.0 130 36.2
Duzib264G0494 Durio zibethinus HOM05D000139 ORTHO05D000103 1.9e-09 67.0 130 38.5
Thhalv10012838m.g Eutrema salsugineum HOM05D000139 ORTHO05D000103 1.9e-09 67.0 154 35.1
BolC9t59150H Brassica oleracea HOM05D000139 ORTHO05D000103 2.5e-09 66.6 101 40.6
Manes.11G084116 Manihot esculenta HOM05D000139 ORTHO05D000103 2.5e-09 66.6 163 32.5
A02p02290 Brassica napus HOM05D000139 ORTHO05D000103 3.2e-09 66.2 144 35.4
Lalb_Chr02g0156771 Lupinus albus HOM05D000139 ORTHO05D000103 3.2e-09 66.2 127 34.6
PGSC0003DMG400005240 Solanum tuberosum HOM05D000139 ORTHO05D000103 3.2e-09 66.2 126 31.0
Hma1.2p1_0771F.1_g215920 Hydrangea macrophylla HOM05D000139 ORTHO05D000103 4.2e-09 65.9 173 27.7
MD09G1007100 Malus domestica HOM05D000139 ORTHO05D000103 4.2e-09 65.9 143 37.8
TWI34G1887 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 4.2e-09 65.9 144 33.3
Nitab4.5_0001771g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 5.5e-09 65.5 117 32.5
Cpa.g.sc70.46 Carica papaya HOM05D000139 ORTHO05D000103 7.1e-09 65.1 123 29.3
Haze_12463 Corylus avellana HOM05D000139 ORTHO05D000103 9.3e-09 64.7 141 33.3
Cc11_g17370 Coffea canephora HOM05D000139 ORTHO05D000103 1.2e-08 64.3 118 31.4
Lalb_Chr24g0403231 Lupinus albus HOM05D000139 ORTHO05D000103 1.2e-08 64.3 144 34.0
MBI11_g13064_MAGBIO Magnolia biondii HOM05D000139 ORTHO05D000103 2.1e-08 63.5 135 28.1
Nn4g22216 Nelumbo nucifera HOM05D000139 ORTHO05D000103 2.1e-08 63.5 136 33.1
Phvul.001G090100 Phaseolus vulgaris HOM05D000139 ORTHO05D000103 2.1e-08 63.5 136 32.4
Solyc01g009880.2 Solanum lycopersicum HOM05D000139 ORTHO05D000103 2.1e-08 63.5 134 30.6
Sp6g30010 Schrenkiella parvula HOM05D000139 ORTHO05D000103 2.7e-08 63.2 142 35.2
PSO017G1372 Papaver somniferum HOM05D000139 ORTHO05D000103 3.5e-08 62.8 131 31.3
Lsat_1_v5_gn_0_3521 Lactuca sativa HOM05D000139 ORTHO05D000103 4.6e-08 62.4 141 31.9
PSO478G1630 Papaver somniferum HOM05D000139 ORTHO05D000103 4.6e-08 62.4 132 30.3
Sopen01g005420 Solanum pennellii HOM05D000139 ORTHO05D000103 4.6e-08 62.4 134 30.6
A10p24420 Brassica napus HOM05D000139 ORTHO05D000103 1.0e-07 61.2 123 37.4
C09p63140 Brassica napus HOM05D000139 ORTHO05D000103 1.0e-07 61.2 134 35.1
BraA10t44508Z Brassica rapa HOM05D000139 ORTHO05D005243 1.0e-07 61.2 123 37.4
MD17G1010900 Malus domestica HOM05D000139 ORTHO05D000103 1.0e-07 61.2 129 37.2
Psat3g167520 Pisum sativum HOM05D000139 ORTHO05D000103 1.0e-07 61.2 125 32.8
THA.LOC104802367 Tarenaya hassleriana HOM05D000139 ORTHO05D000103 1.0e-07 61.2 163 31.3
BcaNung06029 Brassica carinata HOM05D000139 ORTHO05D000103 1.3e-07 60.8 108 38.0
CSS0001005 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 1.3e-07 60.8 119 31.1
Potri.001G060700 Populus trichocarpa HOM05D000139 ORTHO05D000103 1.3e-07 60.8 156 28.2
Psat1g097800 Pisum sativum HOM05D000139 ORTHO05D000103 1.8e-07 60.5 157 29.3
arahy.Tifrunner.gnm1.ann1.PF0ZRD Arachis hypogaea HOM05D000139 ORTHO05D000103 2.3e-07 60.1 109 32.1
Lalb_Chr00c40g0412511 Lupinus albus HOM05D000139 ORTHO05D000103 2.3e-07 60.1 145 33.8
Lalb_Chr00c40g0412521 Lupinus albus HOM05D000139 ORTHO05D000103 2.3e-07 60.1 145 33.8
CiPaw.03G004900 Carya illinoinensis HOM05D000139 ORTHO05D000103 3.0e-07 59.7 128 36.7
Lalb_Chr21g0316851 Lupinus albus HOM05D000139 ORTHO05D000103 3.0e-07 59.7 127 33.1
Nitab4.5_0000913g0030 Nicotiana tabacum HOM05D000139 ORTHO05D000103 3.9e-07 59.3 117 31.6
Ca_26475_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 5.1e-07 58.9 136 32.4
Ah.03g135860 Amaranthus hybridus HOM05D000139 ORTHO05D000103 6.7e-07 58.5 123 30.9
CANSAT56G1519 Cannabis sativa HOM05D000139 ORTHO05D000103 6.7e-07 58.5 117 34.2
FAN14G5436 Fragaria x ananassa HOM05D000139 ORTHO05D000103 6.7e-07 58.5 145 31.0
Sed0011026 Sechium edule HOM05D000139 ORTHO05D000103 8.7e-07 58.2 131 29.0
HanXRQChr17g0551621 Helianthus annuus HOM05D000139 ORTHO05D000103 1.1e-06 57.8 142 32.4
Gohir.A05G335700 Gossypium hirsutum HOM05D000139 ORTHO05D000103 1.5e-06 57.4 106 34.9
Ca_07320_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 1.9e-06 57.0 140 28.6
EL10Ac6g13558 Beta vulgaris HOM05D000139 ORTHO05D000103 2.5e-06 56.6 125 32.8
CAN.G1693.14 Capsicum annuum HOM05D000139 ORTHO05D000103 3.3e-06 56.2 136 29.4
Gorai.012G083800 Gossypium raimondii HOM05D000139 ORTHO05D000103 3.3e-06 56.2 106 34.9
Ah.02g131080 Amaranthus hybridus HOM05D000139 ORTHO05D000103 4.3e-06 55.8 166 28.3
AUR62028881 Chenopodium quinoa HOM05D000139 ORTHO05D000103 4.3e-06 55.8 128 32.0
Glyma.02G065100 Glycine max HOM05D000139 ORTHO05D000103 4.3e-06 55.8 136 29.4
Sabra01G0043600 Salix brachista HOM05D000139 ORTHO05D000103 4.3e-06 55.8 139 28.8
TPR.G36656 Trifolium pratense HOM05D000139 ORTHO05D000103 4.3e-06 55.8 163 27.0
AUR62005674 Chenopodium quinoa HOM05D000139 ORTHO05D000103 5.7e-06 55.5 131 30.5
AUR62005676 Chenopodium quinoa HOM05D000139 ORTHO05D000103 5.7e-06 55.5 127 33.1
COL.COLO4_13306 Corchorus olitorius HOM05D000139 ORTHO05D000103 5.7e-06 55.5 154 30.5
FvH4_6g53940 Fragaria vesca HOM05D000139 ORTHO05D000103 5.7e-06 55.5 145 30.3


User provided reference genes

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