Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4245 Salvia bowleyana HOM05D003918 ORTHO05D004494 1.8e-40 168.7 79 100.0
ClCG01G013880 Citrullus lanatus HOM05D003918 ORTHO05D004494 1.2e-36 156.0 77 93.5
Migut.D02301 Erythranthe guttata HOM05D003918 ORTHO05D004494 1.2e-36 156.0 78 91.0
MBI17_g16530_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 2.1e-36 155.2 77 92.2
Ah.01g016010 Amaranthus hybridus HOM05D003918 ORTHO05D004494 2.7e-36 154.8 77 92.2
Actinidia07191 Actinidia chinensis HOM05D001217 ORTHO05D004494 3.5e-36 154.5 77 92.2
ClCG02G021690 Citrullus lanatus HOM05D003918 ORTHO05D004494 3.5e-36 154.5 77 92.2
MELO3C026958.2 Cucumis melo HOM05D003918 ORTHO05D004494 3.5e-36 154.5 77 92.2
Prupe.6G113800 Prunus persica HOM05D003918 ORTHO05D004494 3.5e-36 154.5 77 92.2
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 3.5e-36 154.5 77 92.2
QL01p014884 Quercus lobata HOM05D003918 ORTHO05D004494 4.6e-36 154.1 77 92.2
C03p85930 Brassica napus HOM05D003918 ORTHO05D004494 7.8e-36 153.3 77 89.6
Duzib168G2331 Durio zibethinus HOM05D003918 ORTHO05D004494 7.8e-36 153.3 77 90.9
MD03G1128000 Malus domestica HOM05D003918 ORTHO05D004494 7.8e-36 153.3 77 90.9
MD11G1149400 Malus domestica HOM05D003918 ORTHO05D004494 7.8e-36 153.3 77 90.9
EL10Ac9g21015 Beta vulgaris HOM05D003918 ORTHO05D004494 1.0e-35 152.9 77 90.9
BcaB03g11846 Brassica carinata HOM05D003918 ORTHO05D004494 1.0e-35 152.9 77 90.9
CANSAT64G2716 Cannabis sativa HOM05D003918 ORTHO05D004494 1.0e-35 152.9 77 90.9
Cpa.g.sc47.8 Carica papaya HOM05D003918 ORTHO05D004494 1.0e-35 152.9 77 92.2
Ca_10762_v3 Cicer arietinum L. HOM05D003918 ORTHO05D004494 1.0e-35 152.9 78 89.7
DCAR_018757 Daucus carota HOM05D003918 ORTHO05D004494 1.0e-35 152.9 78 89.7
Medtr4g057040 Medicago truncatula HOM05D003918 ORTHO05D004494 1.0e-35 152.9 78 89.7
CSS0003214 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
CSS0025262 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
CSS0028017 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
CSS0049251 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
CiPaw.13G144800 Carya illinoinensis HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Cc01_g10200 Coffea canephora HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
COL.COLO4_19215 Corchorus olitorius HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Glyma.11G192100 Glycine max HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Glyma.12G082300 Glycine max HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Gohir.A05G085800 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Gohir.D05G087700 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Gorai.009G089700 Gossypium raimondii HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Hma1.2p1_0051F.1_g029570 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Lj3g0024072 Lotus japonicus HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Lalb_Chr01g0004631 Lupinus albus HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Phvul.011G086900 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Sabra09G0001700 Salix brachista HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 89.6
Sc21g0004230 Simmondsia chinensis HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Sc21g0004490 Simmondsia chinensis HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Thecc.09G297000 Theobroma cacao HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
HPP92_026243 Vanilla planifolia HOM05D003918 ORTHO05D004494 1.3e-35 152.5 77 90.9
Carub.0004s0873 Capsella rubella HOM05D003918 ORTHO05D004494 1.7e-35 152.1 78 88.5
Thhalv10017487m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 1.7e-35 152.1 77 90.9
Psat0ss2518g0280 Pisum sativum HOM05D003918 ORTHO05D004494 1.7e-35 152.1 78 89.7
CAN.G546.56 Capsicum annuum HOM05D003918 ORTHO05D004494 2.3e-35 151.8 78 88.5
AUR62041324 Chenopodium quinoa HOM05D003918 ORTHO05D004494 2.3e-35 151.8 77 89.6
Haze_23526 Corylus avellana HOM05D001217 ORTHO05D001097 2.3e-35 151.8 77 90.9
Rhsim13G0101600 Rhododendron simsii HOM05D003918 ORTHO05D004494 2.3e-35 151.8 77 89.6
Sp4g10790 Schrenkiella parvula HOM05D003918 ORTHO05D004494 2.3e-35 151.8 77 89.6
Zm00001eb402980 Zea mays HOM05D003918 ORTHO05D004494 2.3e-35 151.8 77 89.6
CsaV3_1G014150 Cucumis sativus L. HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 90.9
Dinv29385 Davidia involucrata HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
Eucgr.J00392 Eucalyptus grandis HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
FvH4_3g30520 Fragaria vesca HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
FAN11G2739 Fragaria x ananassa HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
FAN21G0274 Fragaria x ananassa HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
Manes.04G012300 Manihot esculenta HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
Manes.11G152900 Manihot esculenta HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
Nitab4.5_0000173g0230 Nicotiana tabacum HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
Peaxi162Scf00983g00019 Petunia axillaris HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
RcHm_v2.0_Chr5g0056481 Rosa chinensis HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
Sed0005005 Sechium edule HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
Sed0024739 Sechium edule HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 90.9
Sopen11g026220 Solanum pennellii HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
PGSC0003DMG402000458 Solanum tuberosum HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
TWI79G0503 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.0e-35 151.4 75 92.0
TWI79G0939 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.0e-35 151.4 75 92.0
vmacro03250 Vaccinium macrocarpon HOM05D003918 ORTHO05D004494 3.0e-35 151.4 77 89.6
Aa31LG5G8120 Aethionema arabicum HOM05D003918 ORTHO05D004494 3.9e-35 151.0 77 89.6
AL4G22250 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 3.9e-35 151.0 77 89.6
CARHR120680 Cardamine hirsuta HOM05D003918 ORTHO05D004494 3.9e-35 151.0 75 90.7
Haze_03482 Corylus avellana HOM05D003918 ORTHO05D004494 3.9e-35 151.0 77 89.6
Oeu008363.1 Olea europaea HOM05D003918 ORTHO05D004494 3.9e-35 151.0 77 89.6
Potri.009G004000 Populus trichocarpa HOM05D003918 ORTHO05D004494 3.9e-35 151.0 77 89.6
PGR119G0927 Punica granatum HOM05D003918 ORTHO05D004494 3.9e-35 151.0 77 89.6
Rhsim01G0210200 Rhododendron simsii HOM05D003918 ORTHO05D004494 3.9e-35 151.0 77 89.6
TAR633G2652 Trochodendron aralioides HOM05D003918 ORTHO05D004494 3.9e-35 151.0 77 89.6
AT2G27960 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 5.1e-35 150.6 77 88.3
CiPaw.14G106800 Carya illinoinensis HOM05D003918 ORTHO05D004494 5.1e-35 150.6 77 89.6
Dinv16240 Davidia involucrata HOM05D003918 ORTHO05D004494 5.1e-35 150.6 77 89.6
Gohir.A07G105200 Gossypium hirsutum HOM05D003918 ORTHO05D004494 5.1e-35 150.6 77 89.6
Gohir.D07G109300 Gossypium hirsutum HOM05D003918 ORTHO05D004494 5.1e-35 150.6 77 89.6
Gorai.001G117400 Gossypium raimondii HOM05D003918 ORTHO05D004494 5.1e-35 150.6 77 89.6
Oeu007724.1 Olea europaea HOM05D003918 ORTHO05D004494 5.1e-35 150.6 77 89.6
THA.LOC104815736 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 5.1e-35 150.6 77 88.3
Aqoxy1G01058 Aquilegia oxysepala HOM05D003918 ORTHO05D004494 6.6e-35 150.2 77 88.3
BcaC01g00919 Brassica carinata HOM05D003918 ORTHO05D004494 6.6e-35 150.2 77 88.3
A08p17020 Brassica napus HOM05D003918 ORTHO05D004494 6.6e-35 150.2 77 88.3
BraA08t33664Z Brassica rapa HOM05D003918 ORTHO05D004494 6.6e-35 150.2 77 88.3
Nn2g13876 Nelumbo nucifera HOM05D003918 ORTHO05D004494 6.6e-35 150.2 77 90.9
unitig_899.g14962 Utricularia gibba HOM05D003918 ORTHO05D004494 6.6e-35 150.2 77 89.6
Lj1A213T32 Lonicera japonica HOM05D003918 ORTHO05D004494 8.6e-35 149.8 78 87.2
Oeu040442.1 Olea europaea HOM05D003918 ORTHO05D004494 8.6e-35 149.8 77 88.3
Os03g0146300 Oryza sativa ssp. japonica HOM05D003918 ORTHO05D004494 8.6e-35 149.8 75 90.7
PSO801G0480 Papaver somniferum HOM05D003918 ORTHO05D004494 8.6e-35 149.8 77 88.3
SalBow6G1569 Salvia bowleyana HOM05D003918 ORTHO05D004494 8.6e-35 149.8 78 88.5
CAN.G246.3 Capsicum annuum HOM05D003918 ORTHO05D004494 1.1e-34 149.4 77 88.3
CARHR120670 Cardamine hirsuta HOM05D003918 ORTHO05D004494 1.1e-34 149.4 77 88.3
CDE09G0194 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 1.1e-34 149.4 77 87.0
DCAR_015501 Daucus carota HOM05D003918 ORTHO05D004494 1.1e-34 149.4 78 88.5
PGR102G3373 Punica granatum HOM05D003918 ORTHO05D004494 1.1e-34 149.4 75 89.3
GSVIVG01031454001 Vitis vinifera HOM05D003918 ORTHO05D004494 1.1e-34 149.4 77 89.6
Ciclev10029696m.g Citrus clementina HOM05D003918 ORTHO05D004494 1.5e-34 149.1 77 88.3
Lalb_Chr03g0027731 Lupinus albus HOM05D003918 ORTHO05D004494 1.5e-34 149.1 75 90.7
Oeu007309.2 Olea europaea HOM05D003918 ORTHO05D004494 1.5e-34 149.1 77 89.6
TWI31G0950 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 1.5e-34 149.1 77 89.6
TAR623G0966 Trochodendron aralioides HOM05D003918 ORTHO05D004494 1.5e-34 149.1 77 89.6
AL4G22230 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 1.9e-34 148.7 75 89.3
AT2G27970 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 1.9e-34 148.7 75 89.3
BcaB06g28178 Brassica carinata HOM05D003918 ORTHO05D004494 1.9e-34 148.7 76 86.8
Thhalv10017678m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 1.9e-34 148.7 75 89.3
HanXRQChr11g0346091 Helianthus annuus HOM05D003918 ORTHO05D004494 1.9e-34 148.7 77 88.3
PSO339G2710 Papaver somniferum HOM05D003918 ORTHO05D004494 1.9e-34 148.7 75 89.3
ECA248G3596 Erigeron canadensis HOM05D003918 ORTHO05D004494 2.5e-34 148.3 77 88.3
Carub.0004s0872 Capsella rubella HOM05D003918 ORTHO05D004494 3.3e-34 147.9 77 88.3
Eucgr.B03920 Eucalyptus grandis HOM05D003918 ORTHO05D004494 3.3e-34 147.9 75 89.3
FAN25G0673 Fragaria x ananassa HOM05D003918 ORTHO05D004494 3.3e-34 147.9 77 88.3
PSO339G4781 Papaver somniferum HOM05D003918 ORTHO05D004494 3.3e-34 147.9 77 87.0
Potri.004G217500 Populus trichocarpa HOM05D003918 ORTHO05D004494 3.3e-34 147.9 78 87.2
TAR369G0366 Trochodendron aralioides HOM05D003918 ORTHO05D004494 3.3e-34 147.9 77 88.3
THA.LOC104826394 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 4.3e-34 147.5 77 87.0
ATR0043G026 Amborella trichopoda HOM05D003918 ORTHO05D004494 5.6e-34 147.1 75 88.0
ECA233G3711 Erigeron canadensis HOM05D003918 ORTHO05D004494 5.6e-34 147.1 77 87.0
HanXRQChr01g0019451 Helianthus annuus HOM05D003918 ORTHO05D004494 5.6e-34 147.1 77 87.0
Lsat_1_v5_gn_1_64981 Lactuca sativa HOM05D003918 ORTHO05D004494 5.6e-34 147.1 77 87.0
SEGI_17224 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 5.6e-34 147.1 79 86.1
PGSC0003DMG400018822 Solanum tuberosum HOM05D003918 ORTHO05D004494 9.5e-34 146.4 77 88.3
Oeu000602.1 Olea europaea HOM05D003918 ORTHO05D004494 1.2e-33 146.0 77 85.7
Lsat_1_v5_gn_6_43541 Lactuca sativa HOM05D003918 ORTHO05D004494 2.1e-33 145.2 77 84.4
BcaC02g08219 Brassica carinata HOM05D003918 ORTHO05D004494 2.8e-33 144.8 76 84.2
A04p21230 Brassica napus HOM05D003918 ORTHO05D004494 2.8e-33 144.8 76 84.2
C04p57080 Brassica napus HOM05D003918 ORTHO05D004494 2.8e-33 144.8 76 84.2
BolC4t27242H Brassica oleracea HOM05D003918 ORTHO05D004494 2.8e-33 144.8 76 84.2
FAN16G1510 Fragaria x ananassa HOM05D003918 ORTHO05D004494 2.8e-33 144.8 83 83.1
Lalb_Chr19g0136871 Lupinus albus HOM05D003918 ORTHO05D004494 3.6e-33 144.4 75 88.0
Pp3c14_11680 Physcomitrium patens HOM05D003918 ORTHO05D004494 6.2e-33 143.7 77 84.4
Pp3c2_6200 Physcomitrium patens HOM05D003918 ORTHO05D004494 6.2e-33 143.7 77 84.4
MELO3C004864.2 Cucumis melo HOM05D003918 ORTHO05D004494 8.1e-33 143.3 87 80.5
Hma1.2p1_0772F.1_g215980 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 1.1e-32 142.9 93 75.3
Nitab4.5_0003880g0020 Nicotiana tabacum HOM05D003918 ORTHO05D004494 1.4e-32 142.5 75 86.7
SEGI_19027 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 1.8e-32 142.1 77 81.8
SMO116G0276 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 4.0e-32 141.0 75 82.7
Mapoly0001s0011 Marchantia polymorpha HOM05D003918 ORTHO05D004494 1.5e-31 139.0 75 84.0
Zm00001eb003750 Zea mays HOM05D003918 ORTHO05D004494 2.0e-31 138.7 77 81.8
Glyma.12G083700 Glycine max HOM05D003918 ORTHO05D004494 2.6e-31 138.3 77 84.4
Cre03.g180350 Chlamydomonas reinhardtii HOM05D003918 ORTHO05D004494 3.8e-30 134.4 70 85.7
Phvul.011G088400 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 8.4e-30 133.3 77 77.9
MCO11G605 Micromonas commoda HOM05D003918 ORTHO05D004494 2.1e-28 128.6 68 83.8
PRCOL_00005401 Prasinoderma coloniale HOM05D003918 ORTHO05D004494 1.3e-27 125.9 74 74.3
MBI16_g13165_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 1.7e-27 125.6 90 67.8
SMO367G0337 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 3.9e-27 124.4 69 76.8
CDE02G4651 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 4.3e-26 120.9 77 77.9
Zm00001eb012500 Zea mays HOM05D003918 ORTHO05D004494 2.1e-25 118.6 59 89.8
SEGI_02290 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 6.2e-25 117.1 60 88.3
CsaV3_6G014430 Cucumis sativus L. HOM05D003918 ORTHO05D004494 1.1e-24 116.3 60 88.3
CBR_g2791 Chara braunii HOM05D003918 ORTHO05D004494 1.2e-23 112.8 60 83.3
MBI11_g44590_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 3.4e-23 111.3 62 80.6
BcaB02g10127 Brassica carinata HOM05D003918 ORTHO05D004494 7.8e-20 100.1 73 63.0
Actinidia24153 Actinidia chinensis HOM05D003918 ORTHO05D004494 1.7e-19 99.0 55 85.5
TPR.G31695 Trifolium pratense HOM05D003918 ORTHO05D004494 7.3e-18 93.6 48 89.6
ATR0760G002 Amborella trichopoda HOM05D003918 ORTHO05D004494 7.6e-15 83.6 38 92.1
Actinidia03687 Actinidia chinensis HOM05D003918 ORTHO05D004494 8.4e-14 80.1 44 81.8
BcaC05g28675 Brassica carinata HOM05D003918 ORTHO05D004494 1.1e-13 79.7 41 78.0
BolC5t33525H Brassica oleracea HOM05D003918 ORTHO05D004494 1.1e-13 79.7 41 78.0
Nn2g10486 Nelumbo nucifera HOM05D003918 ORTHO05D004494 3.2e-13 78.2 38 86.8
Migut.N02540 Erythranthe guttata HOM05D003918 ORTHO05D004494 5.4e-13 77.4 47 80.9
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 9.3e-13 76.6 46 76.1
SGA_v2.0_scaffold50G18575 Striga asiatica HOM05D003918 ORTHO05D004494 9.3e-13 76.6 38 94.7
Thecc.08G095400 Theobroma cacao HOM05D003918 ORTHO05D004494 1.6e-12 75.9 55 65.5
CSS0049200 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 6.0e-12 73.9 39 84.6
Zm00001eb191010 Zea mays HOM05D003918 ORTHO05D004494 1.3e-11 72.8 77 49.4
Nn6g35195 Nelumbo nucifera HOM05D003918 ORTHO05D004494 5.1e-11 70.9 37 89.2
CSS0021242 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 1.1e-10 69.7 65 58.5
Ah.03g143830 Amaranthus hybridus HOM05D003918 ORTHO05D004494 4.3e-10 67.8 38 86.8
Nn4g23314 Nelumbo nucifera HOM05D003918 ORTHO05D004494 8.1e-09 63.5 29 89.7
Gohir.A02G090001 Gossypium hirsutum HOM05D003918 ORTHO05D004494 9.0e-08 60.1 38 76.3
Nn1g02037 Nelumbo nucifera HOM05D003918 ORTHO05D004494 3.4e-07 58.2 51 54.9
Ah.09g226860 Amaranthus hybridus HOM05D003918 ORTHO05D004494 5.8e-07 57.4 38 78.9


User provided reference genes

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