Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2989 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.3e-89 331.3 163 100.0
SalBow7G4794 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.3e-88 329.7 163 99.4
SalBow1G7264 Salvia bowleyana HOM05D009357 ORTHO05D011530 3.7e-88 328.2 163 98.8
SalBow6G4255 Salvia bowleyana HOM05D009357 ORTHO05D011530 3.7e-88 328.2 163 98.8
SalBow2G1520 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.8e-88 327.8 162 98.8
SalBow1G1656 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.4e-87 326.2 163 98.2
SalBow3G4296 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.4e-87 326.2 163 98.2
SalBow7G0864 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.4e-87 325.5 163 98.2
SalBow1G1090 Salvia bowleyana HOM05D009357 ORTHO05D011530 3.1e-87 325.1 163 98.2
SalBow3G3594 Salvia bowleyana HOM05D009357 ORTHO05D011530 5.3e-87 324.3 163 97.5
SalBow5G4022 Salvia bowleyana HOM05D009357 ORTHO05D011530 5.3e-87 324.3 163 98.2
SalBow6G0183 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.0e-86 322.4 163 96.9
SalBow8G2718 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.7e-85 319.3 163 97.5
SalBow8G4496 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.9e-85 317.8 158 98.1
SalBow1G1799 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.5e-84 315.5 163 95.1
SalBow6G5664 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.0e-79 298.1 149 98.0
SalBow4G0278 Salvia bowleyana HOM05D009357 ORTHO05D011530 5.8e-78 294.3 150 96.7
SalBow5G5242 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.1e-75 285.8 142 98.6
SalBow3G3985 Salvia bowleyana HOM05D009357 ORTHO05D011530 5.5e-68 261.2 163 81.6
SalBow1G1821 Salvia bowleyana HOM05D009357 ORTHO05D011530 9.4e-68 260.4 217 67.3
SalBow1G5114 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.5e-60 235.7 151 78.8
SalBow1G6216 Salvia bowleyana HOM05D009357 ORTHO05D011530 4.4e-57 224.9 163 72.4
SalBow5G2056 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.4e-55 219.9 124 90.3
SalBow1G8117 Salvia bowleyana HOM05D009357 ORTHO05D011530 8.2e-48 194.1 99 99.0
SalBow5G4827 Salvia bowleyana HOM05D009357 ORTHO05D011530 1.9e-44 183.0 101 94.1
Migut.F00036 Erythranthe guttata HOM05D000139 ORTHO05D000103 3.3e-20 102.4 93 51.6
Cc07_g01050 Coffea canephora HOM05D000139 ORTHO05D000103 7.3e-20 101.3 91 54.9
Peaxi162Scf00420g00613 Petunia axillaris HOM05D000139 ORTHO05D000103 2.1e-19 99.8 97 48.5
Nitab4.5_0005858g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 3.6e-19 99.0 97 48.5
Nitab4.5_0000519g0120 Nicotiana tabacum HOM05D000139 ORTHO05D000103 2.3e-18 96.3 97 47.4
SalBow6G1739 Salvia bowleyana HOM05D009357 ORTHO05D363483 4.0e-18 95.5 69 68.1
PGSC0003DMG400020200 Solanum tuberosum HOM05D000139 ORTHO05D000103 6.8e-18 94.7 97 49.5
unitig_88.g27697 Utricularia gibba HOM05D000139 ORTHO05D000103 8.9e-18 94.4 93 45.2
CSS0020733 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 1.2e-17 94.0 97 51.5
CSS0039903 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 1.2e-17 94.0 97 51.5
SalBow1G2550 Salvia bowleyana HOM05D009357 ORTHO05D011530 2.6e-17 92.8 46 95.7
Solyc02g094370.1 Solanum lycopersicum HOM05D000139 ORTHO05D000103 2.6e-17 92.8 97 48.5
Sopen02g039020 Solanum pennellii HOM05D000139 ORTHO05D000103 2.6e-17 92.8 97 48.5
CAN.G473.132 Capsicum annuum HOM05D000139 ORTHO05D000103 1.3e-16 90.5 97 46.4
Dinv33311 Davidia involucrata HOM05D000139 ORTHO05D000103 2.9e-16 89.4 90 48.9
Dinv26735 Davidia involucrata HOM05D009357 ORTHO05D011530 3.7e-16 89.0 89 48.3
Rhsim10G0003800 Rhododendron simsii HOM05D000139 ORTHO05D000103 3.7e-16 89.0 93 50.5
SGA_v2.0_scaffold34G13700 Striga asiatica HOM05D000139 ORTHO05D000103 3.7e-16 89.0 90 47.8
Hma1.2p1_0421F.1_g150090 Hydrangea macrophylla HOM05D000139 ORTHO05D000103 4.9e-16 88.6 86 51.2
Actinidia36227 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.4e-15 86.3 92 47.8
CSS0029814 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 2.4e-15 86.3 92 46.7
unitig_0.g2577 Utricularia gibba HOM05D009357 ORTHO05D011530 3.2e-15 85.9 98 37.8
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 4.1e-15 85.5 92 47.8
Oeu035360.1 Olea europaea HOM05D000139 ORTHO05D000103 5.4e-15 85.1 87 49.4
Lju41C58G1 Lonicera japonica HOM05D000139 ORTHO05D000103 4.6e-14 82.0 93 45.2
DCAR_014490 Daucus carota HOM05D000139 ORTHO05D000103 6.0e-14 81.6 97 41.2
SalBow7G2522 Salvia bowleyana HOM05D000139 ORTHO05D000103 1.7e-13 80.1 93 41.9
SGA_v2.0_scaffold44G16936 Striga asiatica HOM05D000139 ORTHO05D000103 2.3e-13 79.7 87 48.3
Nn3g16361 Nelumbo nucifera HOM05D000139 ORTHO05D001437 6.6e-13 78.2 95 41.1
Potri.017G068000 Populus trichocarpa HOM05D000139 ORTHO05D000103 9.5e-12 74.3 116 38.8
Potri.001G325600 Populus trichocarpa HOM05D000139 ORTHO05D000103 4.7e-11 72.0 97 43.3
Sabra16G0208100 Salix brachista HOM05D000139 ORTHO05D000103 6.2e-11 71.6 97 43.3
TWI60G0954 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 6.2e-11 71.6 95 43.2
TAR622G0662 Trochodendron aralioides HOM05D000139 ORTHO05D000103 1.4e-10 70.5 123 39.0
TWI32G0431 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 2.3e-10 69.7 95 44.2
Actinidia19567 Actinidia chinensis HOM05D000139 ORTHO05D011530 4.0e-10 68.9 64 51.6
CsaV3_5G024390 Cucumis sativus L. HOM05D000139 ORTHO05D000103 6.8e-10 68.2 98 38.8
SalBow7G0135 Salvia bowleyana HOM05D009357 ORTHO05D011530 6.8e-10 68.2 33 97.0
Manes.04G087700 Manihot esculenta HOM05D000139 ORTHO05D000103 1.2e-09 67.4 97 43.3
Aa31LG11G15390 Aethionema arabicum HOM05D000139 ORTHO05D000103 2.6e-09 66.2 95 42.1
Manes.11G084116 Manihot esculenta HOM05D000139 ORTHO05D000103 2.6e-09 66.2 92 41.3
ClCG01G008690 Citrullus lanatus HOM05D000139 ORTHO05D000103 3.4e-09 65.9 98 38.8
BcaNung06465 Brassica carinata HOM05D000139 ORTHO05D011530 1.3e-08 63.9 96 41.7
BolC9t59150H Brassica oleracea HOM05D000139 ORTHO05D000103 1.3e-08 63.9 96 40.6
QL02p070581 Quercus lobata HOM05D000139 ORTHO05D000103 1.3e-08 63.9 90 42.2
AT5G13990 Arabidopsis thaliana HOM05D000139 ORTHO05D000103 1.7e-08 63.5 96 40.6
CARHR199400 Cardamine hirsuta HOM05D000139 ORTHO05D000103 1.7e-08 63.5 98 41.8
MELO3C025086.2 Cucumis melo HOM05D000139 ORTHO05D000103 1.7e-08 63.5 94 38.3
Prupe.3G310000 Prunus persica HOM05D000139 ORTHO05D000103 1.7e-08 63.5 89 44.9
GSVIVG01000924001 Vitis vinifera HOM05D000139 ORTHO05D000103 1.7e-08 63.5 96 39.6
C02p06510 Brassica napus HOM05D000139 ORTHO05D000103 2.2e-08 63.2 96 42.7
Lj1g0025409 Lotus japonicus HOM05D000139 ORTHO05D000103 2.2e-08 63.2 97 40.2
AL6G24650 Arabidopsis lyrata HOM05D000139 ORTHO05D000103 3.7e-08 62.4 96 40.6
Thhalv10012838m.g Eutrema salsugineum HOM05D000139 ORTHO05D000103 3.7e-08 62.4 96 40.6
TWI34G1887 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 3.7e-08 62.4 95 38.9
Carub.0006s1218 Capsella rubella HOM05D000139 ORTHO05D000103 4.9e-08 62.0 96 40.6
BcaB01g05322 Brassica carinata HOM05D000139 ORTHO05D000103 6.4e-08 61.6 102 37.3
A03p06340 Brassica napus HOM05D000139 ORTHO05D000103 6.4e-08 61.6 102 37.3
BolC3t13233H Brassica oleracea HOM05D000139 ORTHO05D000103 6.4e-08 61.6 102 37.3
BraA03t09964Z Brassica rapa HOM05D000139 ORTHO05D000103 6.4e-08 61.6 102 37.3
Peaxi162Scf00255g00011 Petunia axillaris HOM05D000139 ORTHO05D000103 8.3e-08 61.2 87 39.1
BolC2t06598H Brassica oleracea HOM05D000139 ORTHO05D000103 1.1e-07 60.8 91 44.0
THA.LOC104822424 Tarenaya hassleriana HOM05D000139 ORTHO05D000103 1.1e-07 60.8 84 36.9
Actinidia08043 Actinidia chinensis HOM05D009357 ORTHO05D023333 1.4e-07 60.5 93 37.6
Aa31LG5G11190 Aethionema arabicum HOM05D000139 ORTHO05D000103 1.4e-07 60.5 86 39.5
A10p24420 Brassica napus HOM05D000139 ORTHO05D000103 1.4e-07 60.5 85 43.5
C09p63140 Brassica napus HOM05D000139 ORTHO05D000103 1.4e-07 60.5 96 39.6
BraA02t05200Z Brassica rapa HOM05D000139 ORTHO05D000103 1.4e-07 60.5 91 44.0
BraA10t44508Z Brassica rapa HOM05D000139 ORTHO05D005243 1.4e-07 60.5 85 43.5
MBI11_g13064_MAGBIO Magnolia biondii HOM05D000139 ORTHO05D000103 1.4e-07 60.5 87 33.3
Duzib264G0494 Durio zibethinus HOM05D000139 ORTHO05D000103 2.4e-07 59.7 87 44.8
Duzib147G0280 Durio zibethinus HOM05D000139 ORTHO05D000103 3.2e-07 59.3 89 42.7
Hma1.2p1_0771F.1_g215920 Hydrangea macrophylla HOM05D000139 ORTHO05D000103 4.1e-07 58.9 130 29.2
Thecc.04G041800 Theobroma cacao HOM05D000139 ORTHO05D000103 4.1e-07 58.9 87 43.7
A02p02290 Brassica napus HOM05D000139 ORTHO05D000103 5.4e-07 58.5 91 40.7
FAN14G5436 Fragaria x ananassa HOM05D000139 ORTHO05D000103 7.1e-07 58.2 142 31.7
Lalb_Chr02g0156771 Lupinus albus HOM05D000139 ORTHO05D000103 7.1e-07 58.2 102 37.3
Duzib187G0338 Durio zibethinus HOM05D000139 ORTHO05D000103 9.2e-07 57.8 87 42.5
MD09G1007100 Malus domestica HOM05D000139 ORTHO05D000103 9.2e-07 57.8 87 44.8
BcaNung06029 Brassica carinata HOM05D000139 ORTHO05D000103 1.2e-06 57.4 103 37.9
PSO478G1630 Papaver somniferum HOM05D000139 ORTHO05D000103 1.2e-06 57.4 86 37.2
Atru.chr6.2611 Acer truncatum HOM05D000139 ORTHO05D000103 1.6e-06 57.0 87 41.4
Lsat_1_v5_gn_0_3521 Lactuca sativa HOM05D000139 ORTHO05D000103 1.6e-06 57.0 77 39.0
C03p07310 Brassica napus HOM05D000139 ORTHO05D000103 2.1e-06 56.6 102 36.3
Sp6g30010 Schrenkiella parvula HOM05D000139 ORTHO05D000103 2.1e-06 56.6 85 42.4
MD17G1010900 Malus domestica HOM05D000139 ORTHO05D000103 2.7e-06 56.2 87 43.7
Cfa009405 Carpinus fangiana HOM05D000139 ORTHO05D000103 3.5e-06 55.8 86 41.9
PSO017G1372 Papaver somniferum HOM05D000139 ORTHO05D000103 3.5e-06 55.8 86 37.2
Lalb_Chr24g0403231 Lupinus albus HOM05D000139 ORTHO05D000103 4.6e-06 55.5 102 38.2
Ciclev10018071m.g Citrus clementina HOM05D000139 ORTHO05D000103 6.0e-06 55.1 92 38.0
FvH4_6g53940 Fragaria vesca HOM05D000139 ORTHO05D000103 6.0e-06 55.1 142 31.0
Nn4g22216 Nelumbo nucifera HOM05D000139 ORTHO05D000103 6.0e-06 55.1 106 35.8


User provided reference genes

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