Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G3164 Salvia bowleyana HOM05D004931 ORTHO05D006579 3.9e-179 631.3 313 100.0
MSTRG.455 Avicennia marina HOM05D004931 ORTHO05D006579 3.8e-134 481.9 317 77.0
SGA_v2.0_scaffold80G25951 Striga asiatica HOM05D004931 ORTHO05D006579 7.2e-133 477.6 317 78.2
SGA_v2.0_scaffold81G25976 Striga asiatica HOM05D004931 ORTHO05D006579 2.1e-132 476.1 317 77.6
Migut.K01057 Erythranthe guttata HOM05D004931 ORTHO05D006579 2.5e-130 469.2 321 76.0
Prupe.1G215300 Prunus persica HOM05D004931 ORTHO05D006579 1.0e-126 457.2 317 73.8
Dinv06619 Davidia involucrata HOM05D004931 ORTHO05D006579 2.9e-126 455.7 318 73.0
CiPaw.05G101400 Carya illinoinensis HOM05D004931 ORTHO05D006579 3.8e-126 455.3 317 73.5
Gohir.A03G152300 Gossypium hirsutum HOM05D004931 ORTHO05D006579 1.9e-125 453.0 317 72.2
Gohir.D02G175400 Gossypium hirsutum HOM05D004931 ORTHO05D006579 2.5e-125 452.6 317 72.2
Actinidia34703 Actinidia chinensis HOM05D004931 ORTHO05D006579 5.5e-125 451.4 319 73.0
Cc11_g15020 Coffea canephora HOM05D004931 ORTHO05D006579 5.5e-125 451.4 318 72.3
CSS0024647 Camellia sinensis var. sinensis HOM05D004931 ORTHO05D006579 7.2e-125 451.1 317 71.9
Gorai.005G197000 Gossypium raimondii HOM05D004931 ORTHO05D006579 2.1e-124 449.5 317 71.9
Cfa009447 Carpinus fangiana HOM05D004931 ORTHO05D006579 8.8e-123 444.1 317 71.6
Haze_12500 Corylus avellana HOM05D004931 ORTHO05D006579 8.8e-123 444.1 318 71.7
COL.COLO4_21767 Corchorus olitorius HOM05D004931 ORTHO05D006579 1.5e-122 443.4 317 70.7
QL03p049374 Quercus lobata HOM05D004931 ORTHO05D006579 9.7e-122 440.7 326 70.9
Nn3g16276 Nelumbo nucifera HOM05D004931 ORTHO05D006579 2.2e-121 439.5 318 69.5
Thecc.02G192700 Theobroma cacao HOM05D004931 ORTHO05D006579 3.7e-121 438.7 317 69.4
FvH4_4g22670 Fragaria vesca HOM05D004931 ORTHO05D006579 1.1e-120 437.2 321 71.0
vmacro10419 Vaccinium macrocarpon HOM05D004931 ORTHO05D006579 1.4e-120 436.8 335 68.1
TAR622G0753 Trochodendron aralioides HOM05D004931 ORTHO05D006579 1.2e-119 433.7 317 68.8
PSO478G0594 Papaver somniferum HOM05D004931 ORTHO05D006579 2.0e-119 433.0 317 69.7
Manes.08G101500 Manihot esculenta HOM05D004931 ORTHO05D006579 1.7e-118 429.9 316 69.0
PSO017G2176 Papaver somniferum HOM05D004931 ORTHO05D006579 2.2e-118 429.5 317 68.8
MELO3C017814.2 Cucumis melo HOM05D004931 ORTHO05D006579 2.9e-118 429.1 317 68.8
CsaV3_4G002250 Cucumis sativus L. HOM05D004931 ORTHO05D006579 2.9e-118 429.1 317 68.8
TAR374G0634 Trochodendron aralioides HOM05D004931 ORTHO05D006579 4.2e-117 425.2 317 67.5
ECA238G3692 Erigeron canadensis HOM05D004931 ORTHO05D006579 2.1e-116 422.9 319 68.7
unitig_8.g2895 Utricularia gibba HOM05D004931 ORTHO05D006579 2.1e-116 422.9 317 68.5
Ciclev10005352m.g Citrus clementina HOM05D004931 ORTHO05D006579 2.7e-116 422.5 295 71.5
Cpa.g.sc38.82 Carica papaya HOM05D004931 ORTHO05D006579 3.6e-116 422.2 317 69.4
Lj6A838G27 Lonicera japonica HOM05D004931 ORTHO05D006579 4.7e-116 421.8 355 63.9
Solyc04g045480.3 Solanum lycopersicum HOM05D004931 ORTHO05D006579 1.0e-115 420.6 316 69.0
Sed0000722 Sechium edule HOM05D004931 ORTHO05D006579 1.8e-115 419.9 318 67.0
CANSAT01G2308 Cannabis sativa HOM05D004931 ORTHO05D006579 2.3e-115 419.5 317 68.5
Aqoxy5G03136 Aquilegia oxysepala HOM05D004931 ORTHO05D006579 3.0e-115 419.1 314 67.2
Rhsim09G0128100 Rhododendron simsii HOM05D004931 ORTHO05D006579 3.9e-115 418.7 371 61.2
Atru.chr12.1413 Acer truncatum HOM05D004931 ORTHO05D006579 5.2e-115 418.3 295 68.8
Glyma.13G248100 Glycine max HOM05D004931 ORTHO05D006579 6.7e-115 417.9 317 67.2
Lsat_1_v5_gn_2_17061 Lactuca sativa HOM05D004931 ORTHO05D006579 1.1e-114 417.2 325 66.8
MD00G1177400 Malus domestica HOM05D004931 ORTHO05D006579 1.1e-114 417.2 282 76.2
Potri.003G162600 Populus trichocarpa HOM05D004931 ORTHO05D006579 1.5e-114 416.8 320 68.1
VMungo0540G0694 Vigna mungo HOM05D004931 ORTHO05D006579 2.0e-114 416.4 317 66.9
GSVIVG01001087001 Vitis vinifera HOM05D004931 ORTHO05D006579 2.0e-114 416.4 317 65.3
Glyma.15G065800 Glycine max HOM05D004931 ORTHO05D006579 2.6e-114 416.0 317 67.8
MD13G1130400 Malus domestica HOM05D004931 ORTHO05D006579 5.7e-114 414.8 290 73.4
Medtr2g011420 Medicago truncatula HOM05D004931 ORTHO05D006579 5.7e-114 414.8 291 72.5
Sopen04g017340 Solanum pennellii HOM05D004931 ORTHO05D006579 7.4e-114 414.5 304 70.1
AUR62005713 Chenopodium quinoa HOM05D004931 ORTHO05D006579 9.7e-114 414.1 306 67.0
PGR102G0149 Punica granatum HOM05D004931 ORTHO05D006579 1.7e-113 413.3 318 66.0
Manes.09G188000 Manihot esculenta HOM05D004931 ORTHO05D006579 2.2e-113 412.9 317 65.9
Ca_00224_v3 Cicer arietinum L. HOM05D004931 ORTHO05D006579 3.7e-113 412.1 290 71.4
TWI36G0173 Tripterygium wilfordii HOM05D004931 ORTHO05D006579 4.8e-113 411.8 323 66.3
Duzib248G0794 Durio zibethinus HOM05D004931 ORTHO05D006579 9.1e-112 407.5 282 72.7
arahy.Tifrunner.gnm1.ann1.BF7HNV Arachis hypogaea HOM05D004931 ORTHO05D006579 1.2e-111 407.1 314 67.2
arahy.Tifrunner.gnm1.ann1.Q671IP Arachis hypogaea HOM05D004931 ORTHO05D006579 1.6e-111 406.8 314 67.2
HanXRQChr17g0559151 Helianthus annuus HOM05D004931 ORTHO05D006579 2.6e-111 406.0 328 64.6
Lj6g0004184 Lotus japonicus HOM05D004931 ORTHO05D006579 3.5e-111 405.6 293 69.6
ClCG07G011910 Citrullus lanatus HOM05D004931 ORTHO05D006579 5.0e-110 401.7 321 66.0
RcHm_v2.0_Chr4g0428911 Rosa chinensis HOM05D004931 ORTHO05D006579 8.5e-110 401.0 285 71.9
Psat1g210240 Pisum sativum HOM05D004931 ORTHO05D006579 1.1e-109 400.6 291 69.1
Phvul.006G193900 Phaseolus vulgaris HOM05D004931 ORTHO05D006579 1.5e-109 400.2 318 65.4
EL10Ac6g13609 Beta vulgaris HOM05D004931 ORTHO05D006579 1.9e-109 399.8 298 66.4
Sp1g24310 Schrenkiella parvula HOM05D004931 ORTHO05D006579 3.2e-109 399.1 316 64.9
TPR.G19613 Trifolium pratense HOM05D004931 ORTHO05D006579 4.2e-109 398.7 291 69.4
FAN17G1056 Fragaria x ananassa HOM05D004931 ORTHO05D006579 7.2e-109 397.9 304 68.4
AUR62028841 Chenopodium quinoa HOM05D004931 ORTHO05D006579 9.4e-109 397.5 282 70.9
THA.LOC104814207 Tarenaya hassleriana HOM05D004931 ORTHO05D006579 9.4e-109 397.5 318 63.8
Sc14g0009240 Simmondsia chinensis HOM05D004931 ORTHO05D006579 3.6e-108 395.6 307 66.1
Nitab4.5_0007183g0010 Nicotiana tabacum HOM05D004931 ORTHO05D006579 1.4e-107 393.7 323 64.4
Thhalv10008031m.g Eutrema salsugineum HOM05D004931 ORTHO05D006579 1.8e-107 393.3 317 63.4
Potri.001G067400 Populus trichocarpa HOM05D004931 ORTHO05D006579 1.8e-107 393.3 282 70.2
CARHR027590 Cardamine hirsuta HOM05D004931 ORTHO05D006579 2.0e-106 389.8 318 63.2
Carub.0001s2655 Capsella rubella HOM05D004931 ORTHO05D006579 2.6e-106 389.4 316 63.9
AL1G41640 Arabidopsis lyrata HOM05D004931 ORTHO05D006579 4.4e-106 388.7 318 62.9
AT1G28120 Arabidopsis thaliana HOM05D004931 ORTHO05D006579 2.8e-105 386.0 316 63.0
Aa31sc45G20 Aethionema arabicum HOM05D004931 ORTHO05D006579 2.4e-104 382.9 303 64.4
BcaB03g12136 Brassica carinata HOM05D004931 ORTHO05D006579 5.3e-104 381.7 320 62.5
CDE05G1203 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 5.3e-104 381.7 306 62.4
CDE05G3195 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 9.1e-104 380.9 306 62.1
HPP92_011736 Vanilla planifolia HOM05D004931 ORTHO05D006579 2.0e-103 379.8 298 64.8
FAN07G1868 Fragaria x ananassa HOM05D004931 ORTHO05D006579 1.0e-102 377.5 306 66.3
DCAR_024966 Daucus carota HOM05D004931 ORTHO05D006579 5.5e-101 371.7 317 61.2
Ah.02g131420 Amaranthus hybridus HOM05D004931 ORTHO05D006579 7.2e-101 371.3 320 61.6
BolC3t19725H Brassica oleracea HOM05D004931 ORTHO05D006579 9.4e-101 370.9 317 61.5
BcaC01g00008 Brassica carinata HOM05D004931 ORTHO05D006579 1.2e-100 370.5 317 61.2
Os08g0537800 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D006579 1.6e-100 370.2 276 65.6
BcaB03g13953 Brassica carinata HOM05D004931 ORTHO05D006579 1.4e-99 367.1 275 67.6
CAN.G465.9 Capsicum annuum HOM05D004931 ORTHO05D006579 5.7e-98 361.7 262 70.2
MBI07_g35974_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 8.3e-97 357.8 298 62.1
C03p74760 Brassica napus HOM05D004931 ORTHO05D006579 1.4e-96 357.1 342 57.0
A08p25870 Brassica napus HOM05D004931 ORTHO05D006579 1.8e-96 356.7 344 57.3
SEGI_13679 Sequoiadendron giganteum HOM05D004931 ORTHO05D006579 2.4e-96 356.3 292 60.6
Nitab4.5_0001408g0040 Nicotiana tabacum HOM05D004931 ORTHO05D006579 3.1e-96 355.9 271 68.3
ATR0582G144 Amborella trichopoda HOM05D004931 ORTHO05D006579 2.7e-95 352.8 300 60.0
FAN12G1488 Fragaria x ananassa HOM05D004931 ORTHO05D006579 2.9e-94 349.4 294 64.3
HPP92_011677 Vanilla planifolia HOM05D004931 ORTHO05D006579 5.0e-94 348.6 276 63.8
Peaxi162Scf00128g01757 Petunia axillaris HOM05D004931 ORTHO05D006579 1.2e-92 344.0 268 66.0
BraA08t34541Z Brassica rapa HOM05D004931 ORTHO05D006579 2.1e-92 343.2 344 56.4
AagrBONN_evm.TU.Sc2ySwM_368.2426 Anthoceros agrestis HOM05D004931 ORTHO05D006579 2.2e-89 333.2 265 62.6
BolC7t42231H Brassica oleracea HOM05D004931 ORTHO05D006579 4.9e-89 332.0 272 63.2
C07p17280 Brassica napus HOM05D004931 ORTHO05D006579 3.1e-88 329.3 272 63.2
Mapoly0005s0248 Marchantia polymorpha HOM05D004931 ORTHO05D006579 4.1e-88 328.9 287 58.2
Hund26708 Selenicereus undatus HOM05D004931 ORTHO05D006579 1.2e-87 327.4 276 62.3
Dinv02758 Davidia involucrata HOM05D004931 ORTHO05D006579 1.5e-85 320.5 215 74.9
BcaC06g35334 Brassica carinata HOM05D004931 ORTHO05D006579 2.5e-85 319.7 272 61.8
Zm00001eb175560 Zea mays HOM05D004931 ORTHO05D006579 2.5e-85 319.7 263 62.4
Sabra01G0046800 Salix brachista HOM05D004931 ORTHO05D006579 1.2e-84 317.4 284 58.8
Pp3c5_2520 Physcomitrium patens HOM05D004931 ORTHO05D006579 1.6e-84 317.0 300 55.3
SMO358G0085 Selaginella moellendorffii HOM05D004931 ORTHO05D006579 1.0e-83 314.3 262 59.9
AagrBONN_evm.TU.Sc2ySwM_26.3 Anthoceros agrestis HOM05D004931 ORTHO05D006579 2.9e-81 306.2 239 64.0
Sed0016914 Sechium edule HOM05D004931 ORTHO05D006579 1.9e-80 303.5 217 71.4
Pp3c6_24540 Physcomitrium patens HOM05D004931 ORTHO05D006579 3.2e-80 302.8 261 59.0
Actinidia31350 Actinidia chinensis HOM05D004931 ORTHO05D006579 1.6e-79 300.4 323 54.5
Duzib132G0410 Durio zibethinus HOM05D004931 ORTHO05D006579 5.0e-78 295.4 270 59.3
MBI10_g42797_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 8.6e-78 294.7 283 55.1
Lalb_Chr15g0090151 Lupinus albus HOM05D004931 ORTHO05D006579 2.5e-77 293.1 216 69.0
PSO832G0491 Papaver somniferum HOM05D004931 ORTHO05D006579 2.1e-68 263.5 233 59.2
A07p11470 Brassica napus HOM05D004931 ORTHO05D006579 3.2e-56 223.0 290 45.9
BraA07t28936Z Brassica rapa HOM05D004931 ORTHO05D006579 1.6e-52 210.7 260 47.3
Cre10.g441500 Chlamydomonas reinhardtii HOM05D004931 ORTHO05D006579 2.8e-52 209.9 313 39.3
PGSC0003DMG401006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 3.8e-49 199.5 158 65.8
Eucgr.B03557 Eucalyptus grandis HOM05D004931 ORTHO05D006579 2.8e-44 183.3 135 69.6
Haze_27431 Corylus avellana HOM05D004931 ORTHO05D006579 3.1e-43 179.9 281 37.7
Lalb_Chr18g0060061 Lupinus albus HOM05D004931 ORTHO05D006579 3.1e-43 179.9 134 67.9
PGSC0003DMG402006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 1.7e-41 174.1 134 66.4
PRCOL_00001027 Prasinoderma coloniale HOM05D004931 ORTHO05D006579 1.1e-40 171.4 259 39.0
PSO170G5257 Papaver somniferum HOM05D004650 ORTHO05D005715 5.8e-34 149.1 132 59.1
RcHm_v2.0_Chr7g0205601 Rosa chinensis HOM05D004931 ORTHO05D006579 2.2e-33 147.1 88 79.5
CBR_g45420 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-31 141.4 156 51.3
TPR.G382 Trifolium pratense HOM05D004931 ORTHO05D006579 1.0e-25 121.7 83 69.9
Sc17g0004710 Simmondsia chinensis HOM05D004931 ORTHO05D006579 7.1e-24 115.5 104 57.7
TPR.G19900 Trifolium pratense HOM05D004931 ORTHO05D006579 3.9e-22 109.8 83 67.5
Zm00001eb406040 Zea mays HOM05D004931 ORTHO05D006579 4.3e-21 106.3 299 26.1
ECA238G1930 Erigeron canadensis HOM05D000406 ORTHO05D006918 2.6e-18 97.1 74 63.5
Os02g0521600 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D037234 2.6e-18 97.1 267 27.3
Os04g0652600 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D299584 6.5e-17 92.4 330 24.8
Zm00001eb242070 Zea mays HOM05D004931 ORTHO05D037234 8.5e-17 92.0 262 29.0
Zm00001eb406050 Zea mays HOM05D004931 ORTHO05D444756 7.9e-15 85.5 215 27.0
FAN01G2784 Fragaria x ananassa HOM05D005362 ORTHO05D006895 1.4e-14 84.7 153 39.9
TPR.G399 Trifolium pratense HOM05D004931 ORTHO05D006579 9.7e-13 78.6 83 50.6
C01p27720 Brassica napus HOM05D004931 ORTHO05D027277 1.3e-12 78.2 72 51.4
Solyc03g059395.1 Solanum lycopersicum HOM05D004931 ORTHO05D006579 1.7e-12 77.8 51 64.7
Zm00001eb037020 Zea mays HOM05D004931 ORTHO05D006579 2.2e-12 77.4 50 68.0
BolC2t10441H Brassica oleracea HOM05D004931 ORTHO05D027277 1.1e-11 75.1 76 52.6
TPR.G27432 Trifolium pratense HOM05D004931 ORTHO05D006579 3.4e-10 70.1 81 50.6
Cre06.g253755 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D145199 5.9e-10 69.3 320 23.8
Lalb_Chr18g0060051 Lupinus albus HOM05D004931 ORTHO05D006579 5.9e-10 69.3 47 66.0
Cre06.g253459 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D146359 7.7e-10 68.9 320 23.8
BcaC03g16580 Brassica carinata HOM05D004931 ORTHO05D027277 2.2e-09 67.4 58 56.9
Sopen03g014100 Solanum pennellii HOM05D004931 ORTHO05D006579 3.2e-08 63.5 41 68.3


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