Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2207 Salvia bowleyana HOM05D003977 ORTHO05D004536 2.3e-72 275.4 136 100.0
SalBow1G6973 Salvia bowleyana HOM05D003977 ORTHO05D004536 4.9e-62 241.1 117 100.0
SalBow2G0230 Salvia bowleyana HOM05D003977 ORTHO05D004536 3.6e-49 198.4 125 80.8
Migut.K01127 Erythranthe guttata HOM05D003977 ORTHO05D004536 1.3e-38 163.3 109 71.6
SGA_v2.0_scaffold81G25979 Striga asiatica HOM05D003977 ORTHO05D004536 1.6e-36 156.4 126 61.1
MSTRG.444 Avicennia marina HOM05D003977 ORTHO05D004536 3.3e-34 148.7 108 67.6
CiPaw.06G056400 Carya illinoinensis HOM05D003977 ORTHO05D004536 4.9e-30 134.8 112 60.7
Dinv06987 Davidia involucrata HOM05D003977 ORTHO05D004536 2.5e-29 132.5 112 60.7
Dinv14623 Davidia involucrata HOM05D003977 ORTHO05D004536 7.1e-29 131.0 112 59.8
MBI11_g07996_MAGBIO Magnolia biondii HOM05D003977 ORTHO05D004536 1.8e-27 126.3 116 56.0
CSS0046878 Camellia sinensis var. sinensis HOM05D003977 ORTHO05D004536 2.3e-27 125.9 112 58.0
TAR622G1067 Trochodendron aralioides HOM05D003977 ORTHO05D004536 3.9e-27 125.2 112 58.9
PGSC0003DMG400011581 Solanum tuberosum HOM05D003977 ORTHO05D004536 8.7e-27 124.0 115 53.9
AUR62033843 Chenopodium quinoa HOM05D003977 ORTHO05D004536 1.1e-26 123.6 123 51.2
DCAR_008196 Daucus carota HOM05D003977 ORTHO05D004536 1.1e-26 123.6 115 57.4
Gohir.D04G016500 Gossypium hirsutum HOM05D003977 ORTHO05D004536 1.5e-26 123.2 111 55.9
Gorai.012G019200 Gossypium raimondii HOM05D003977 ORTHO05D004536 1.5e-26 123.2 111 55.9
Nn4g22094 Nelumbo nucifera HOM05D003977 ORTHO05D004536 1.5e-26 123.2 112 55.4
Nn3g16238 Nelumbo nucifera HOM05D003977 ORTHO05D004536 1.9e-26 122.9 112 54.5
CiPaw.14G009300 Carya illinoinensis HOM05D003977 ORTHO05D004536 2.5e-26 122.5 112 58.0
Haze_02995 Corylus avellana HOM05D003977 ORTHO05D004536 4.3e-26 121.7 112 55.4
HanXRQChr06g0175421 Helianthus annuus HOM05D003977 ORTHO05D004536 4.3e-26 121.7 114 53.5
DCAR_004259 Daucus carota HOM05D003977 ORTHO05D004536 5.7e-26 121.3 115 54.8
DCAR_004260 Daucus carota HOM05D003977 ORTHO05D004536 5.7e-26 121.3 115 54.8
Sabra01G0022500 Salix brachista HOM05D003977 ORTHO05D004536 5.7e-26 121.3 112 54.5
Solyc09g091280.4 Solanum lycopersicum HOM05D003977 ORTHO05D004536 9.7e-26 120.6 115 52.2
Sopen09g034250 Solanum pennellii HOM05D003977 ORTHO05D004536 9.7e-26 120.6 115 52.2
Cc11_g14880 Coffea canephora HOM05D003977 ORTHO05D004536 1.6e-25 119.8 115 54.8
Duzib106G1228 Durio zibethinus HOM05D003977 ORTHO05D004536 1.6e-25 119.8 112 54.5
Lalb_Chr03g0032201 Lupinus albus HOM05D003977 ORTHO05D004536 1.6e-25 119.8 113 50.4
Potri.001G031400 Populus trichocarpa HOM05D003977 ORTHO05D004536 1.6e-25 119.8 112 54.5
Ciclev10000128m.g Citrus clementina HOM05D003977 ORTHO05D004536 2.8e-25 119.0 113 54.9
ECA246G4717 Erigeron canadensis HOM05D003977 ORTHO05D004536 2.8e-25 119.0 114 51.8
Rhsim12G0015900 Rhododendron simsii HOM05D003977 ORTHO05D004536 2.8e-25 119.0 112 57.1
Gohir.D04G016400 Gossypium hirsutum HOM05D003977 ORTHO05D004536 3.7e-25 118.6 111 52.3
vmacro01007 Vaccinium macrocarpon HOM05D003977 ORTHO05D004536 4.8e-25 118.2 112 55.4
Glyma.13G192400 Glycine max HOM05D003977 ORTHO05D004536 6.3e-25 117.9 113 50.4
Prupe.2G042800 Prunus persica HOM05D003977 ORTHO05D004536 6.3e-25 117.9 116 53.4
TPR.G8543 Trifolium pratense HOM05D003977 ORTHO05D004536 6.3e-25 117.9 115 52.2
CAN.G1588.14 Capsicum annuum HOM05D003977 ORTHO05D004536 8.2e-25 117.5 115 52.2
Cfa010949 Carpinus fangiana HOM05D003977 ORTHO05D004536 8.2e-25 117.5 112 53.6
Glyma.04G192200 Glycine max HOM05D003977 ORTHO05D004536 8.2e-25 117.5 113 50.4
Gohir.A05G399500 Gossypium hirsutum HOM05D003977 ORTHO05D004536 8.2e-25 117.5 111 52.3
PSO478G2410 Papaver somniferum HOM05D003977 ORTHO05D004536 8.2e-25 117.5 110 50.9
QL04p021130 Quercus lobata HOM05D003977 ORTHO05D004536 8.2e-25 117.5 107 55.1
QL93p0049_0031 Quercus lobata HOM05D003977 ORTHO05D004536 8.2e-25 117.5 107 55.1
Cpa.g.sc169.40 Carica papaya HOM05D003977 ORTHO05D004536 1.1e-24 117.1 112 52.7
Ca_23978_v3 Cicer arietinum L. HOM05D003977 ORTHO05D004536 1.1e-24 117.1 113 52.2
RcHm_v2.0_Chr1g0326641 Rosa chinensis HOM05D003977 ORTHO05D004536 1.1e-24 117.1 114 52.6
TAR629G1670 Trochodendron aralioides HOM05D003977 ORTHO05D004536 1.1e-24 117.1 112 53.6
Nitab4.5_0008702g0020 Nicotiana tabacum HOM05D003977 ORTHO05D004536 1.4e-24 116.7 115 53.0
Peaxi162Scf00047g01540 Petunia axillaris HOM05D003977 ORTHO05D004536 1.4e-24 116.7 115 55.7
GSVIVG01035560001 Vitis vinifera HOM05D003977 ORTHO05D004536 1.4e-24 116.7 113 55.8
MD02G1277700 Malus domestica HOM05D003977 ORTHO05D004536 1.8e-24 116.3 112 53.6
Medtr8g040560 Medicago truncatula HOM05D003977 ORTHO05D004536 1.8e-24 116.3 113 50.4
PSO017G2490 Papaver somniferum HOM05D003977 ORTHO05D004536 1.8e-24 116.3 110 50.9
Sed0027944 Sechium edule HOM05D003977 ORTHO05D004536 1.8e-24 116.3 112 51.8
AUR62035738 Chenopodium quinoa HOM05D003977 ORTHO05D004536 2.4e-24 115.9 123 49.6
FAN01G0005 Fragaria x ananassa HOM05D003977 ORTHO05D004536 2.4e-24 115.9 114 50.9
Lalb_Chr19g0132941 Lupinus albus HOM05D003977 ORTHO05D004536 2.4e-24 115.9 113 49.6
MD07G1045800 Malus domestica HOM05D003977 ORTHO05D004536 2.4e-24 115.9 112 51.8
Psat4g145000 Pisum sativum HOM05D003977 ORTHO05D004536 2.4e-24 115.9 113 48.7
TWI15G1223 Tripterygium wilfordii HOM05D003977 ORTHO05D004536 3.1e-24 115.5 112 51.8
Os08g0538700 Oryza sativa ssp. japonica HOM05D003977 ORTHO05D004536 4.1e-24 115.2 117 49.6
COL.COLO4_20737 Corchorus olitorius HOM05D003977 ORTHO05D004536 6.9e-24 114.4 121 52.1
Glyma.15G230300 Glycine max HOM05D003977 ORTHO05D004536 6.9e-24 114.4 113 50.4
Hma1.2p1_0468F.1_g158780 Hydrangea macrophylla HOM05D003977 ORTHO05D004536 6.9e-24 114.4 112 53.6
Sc02g0008490 Simmondsia chinensis HOM05D003977 ORTHO05D004536 6.9e-24 114.4 112 53.6
MELO3C012492.2 Cucumis melo HOM05D003977 ORTHO05D004536 1.5e-23 113.2 112 50.9
EL10Ac1g02273 Beta vulgaris HOM05D003977 ORTHO05D004536 2.0e-23 112.8 128 46.9
Carub.0003s1164 Capsella rubella HOM05D003977 ORTHO05D004536 2.0e-23 112.8 113 47.8
QL04p021333 Quercus lobata HOM05D003977 ORTHO05D004536 2.0e-23 112.8 112 52.7
Atru.chr12.1306 Acer truncatum HOM05D003977 ORTHO05D004536 2.6e-23 112.5 112 50.9
FAN10G3794 Fragaria x ananassa HOM05D003977 ORTHO05D004536 3.4e-23 112.1 132 46.2
Lj3g0027102 Lotus japonicus HOM05D003977 ORTHO05D004536 3.4e-23 112.1 113 51.3
Nitab4.5_0002182g0050 Nicotiana tabacum HOM05D003977 ORTHO05D004536 3.4e-23 112.1 115 53.9
THA.LOC104799327 Tarenaya hassleriana HOM05D003977 ORTHO05D004536 3.4e-23 112.1 112 50.9
ATR0582G127 Amborella trichopoda HOM05D003977 ORTHO05D004536 4.5e-23 111.7 109 50.5
Aqoxy5G03020 Aquilegia oxysepala HOM05D003977 ORTHO05D004536 4.5e-23 111.7 112 49.1
Prupe.8G086800 Prunus persica HOM05D003977 ORTHO05D004536 4.5e-23 111.7 109 51.4
Gorai.012G019100 Gossypium raimondii HOM05D003977 ORTHO05D004536 5.9e-23 111.3 111 50.5
Lj1g0022785 Lotus japonicus HOM05D003977 ORTHO05D004536 5.9e-23 111.3 128 46.1
VMungo1127G0455 Vigna mungo HOM05D003977 ORTHO05D004536 5.9e-23 111.3 113 47.8
Thhalv10019977m.g Eutrema salsugineum HOM05D003977 ORTHO05D004536 7.6e-23 110.9 130 43.8
unitig_22.g6370 Utricularia gibba HOM05D003977 ORTHO05D004536 1.0e-22 110.5 107 54.2
HPP92_000321 Vanilla planifolia HOM05D003977 ORTHO05D004536 1.0e-22 110.5 113 50.4
ClCG05G026990 Citrullus lanatus HOM05D003977 ORTHO05D004536 1.3e-22 110.2 111 49.5
CsaV3_5G036930 Cucumis sativus L. HOM05D003977 ORTHO05D004536 1.3e-22 110.2 112 50.0
FvH4_7g03720 Fragaria vesca HOM05D003977 ORTHO05D004536 1.3e-22 110.2 114 49.1
FAN03G2084 Fragaria x ananassa HOM05D003977 ORTHO05D004536 1.3e-22 110.2 114 49.1
FAN06G3123 Fragaria x ananassa HOM05D003977 ORTHO05D004536 1.3e-22 110.2 114 49.1
Lsat_1_v5_gn_3_33021 Lactuca sativa HOM05D003977 ORTHO05D004536 1.3e-22 110.2 113 48.7
AL3G23940 Arabidopsis lyrata HOM05D003977 ORTHO05D004536 1.7e-22 109.8 114 48.2
Sed0009106 Sechium edule HOM05D003977 ORTHO05D004536 1.7e-22 109.8 112 48.2
TWI38G1846 Tripterygium wilfordii HOM05D003977 ORTHO05D004536 3.8e-22 108.6 112 50.9
AT3G12280 Arabidopsis thaliana HOM05D003977 ORTHO05D004536 5.0e-22 108.2 113 49.6
Aa31LG7G12510 Aethionema arabicum HOM05D003977 ORTHO05D004536 6.5e-22 107.8 113 46.9
BolC5t34217H Brassica oleracea HOM05D003977 ORTHO05D004536 8.5e-22 107.5 114 47.4
CANSAT56G0684 Cannabis sativa HOM05D003977 ORTHO05D004536 8.5e-22 107.5 112 48.2
THA.LOC104826752 Tarenaya hassleriana HOM05D003977 ORTHO05D004536 8.5e-22 107.5 112 49.1
Phvul.011G201200 Phaseolus vulgaris HOM05D003977 ORTHO05D004536 1.1e-21 107.1 113 46.9
BolC3t16833H Brassica oleracea HOM05D003977 ORTHO05D004536 1.4e-21 106.7 130 42.3
unitig_26.g10435 Utricularia gibba HOM05D003977 ORTHO05D004536 1.4e-21 106.7 163 39.9
CDE09G1395 Ceratophyllum demersum HOM05D003977 ORTHO05D004536 1.9e-21 106.3 113 47.8
PGR031G0564 Punica granatum HOM05D003977 ORTHO05D004536 2.5e-21 105.9 112 47.3
BcaC09g48227 Brassica carinata HOM05D003977 ORTHO05D004536 3.2e-21 105.5 115 45.2
C01p53050 Brassica napus HOM05D003977 ORTHO05D004536 3.2e-21 105.5 115 45.2
C03p45560 Brassica napus HOM05D003977 ORTHO05D004536 3.2e-21 105.5 114 45.6
BolC1t05248H Brassica oleracea HOM05D003977 ORTHO05D004536 3.2e-21 105.5 115 45.2
CARHR086830 Cardamine hirsuta HOM05D003977 ORTHO05D004536 5.5e-21 104.8 114 45.6
Duzib114G0684 Durio zibethinus HOM05D003977 ORTHO05D004536 5.5e-21 104.8 112 50.0
Thecc.10G142800 Theobroma cacao HOM05D003977 ORTHO05D004536 5.5e-21 104.8 112 50.9
C05p55510 Brassica napus HOM05D003977 ORTHO05D004536 7.2e-21 104.4 114 47.4
BraA05t22505Z Brassica rapa HOM05D003977 ORTHO05D004536 1.6e-20 103.2 114 46.5
CDE02G2628 Ceratophyllum demersum HOM05D003977 ORTHO05D004536 1.6e-20 103.2 113 46.9
Sp3g10500 Schrenkiella parvula HOM05D003977 ORTHO05D004536 1.6e-20 103.2 114 43.9
A03p37570 Brassica napus HOM05D003977 ORTHO05D004536 2.1e-20 102.8 114 44.7
A05p37080 Brassica napus HOM05D003977 ORTHO05D004536 2.7e-20 102.4 114 46.5
AUR62041503 Chenopodium quinoa HOM05D003977 ORTHO05D004536 3.6e-20 102.1 158 39.2
BraA03t12911Z Brassica rapa HOM05D003977 ORTHO05D004536 7.9e-20 100.9 114 43.9
arahy.Tifrunner.gnm1.ann1.I0XR4S Arachis hypogaea HOM05D003977 ORTHO05D004536 1.4e-19 100.1 132 44.7
arahy.Tifrunner.gnm1.ann1.Q9GEU7 Arachis hypogaea HOM05D003977 ORTHO05D004536 1.4e-19 100.1 132 44.7
Zm00001eb037120 Zea mays HOM05D003977 ORTHO05D004536 3.0e-19 99.0 117 44.4
Gorai.009G299000 Gossypium raimondii HOM05D003977 ORTHO05D004536 5.1e-19 98.2 111 48.6
Zm00001eb198220 Zea mays HOM05D003977 ORTHO05D004536 5.1e-19 98.2 117 44.4
BcaB04g18687 Brassica carinata HOM05D003977 ORTHO05D004536 6.7e-19 97.8 133 41.4
Hma1.2p1_0112F.1_g054450 Hydrangea macrophylla HOM05D000462 ORTHO05D004536 6.7e-19 97.8 118 45.8
Pp3c15_2800 Physcomitrium patens HOM05D003977 ORTHO05D004536 6.7e-19 97.8 118 42.4
Gohir.A05G283400 Gossypium hirsutum HOM05D003977 ORTHO05D004536 1.1e-18 97.1 111 46.8
Gohir.D05G284400 Gossypium hirsutum HOM05D003977 ORTHO05D004536 1.1e-18 97.1 109 48.6
SEGI_33786 Sequoiadendron giganteum HOM05D003977 ORTHO05D004536 1.5e-18 96.7 114 41.2
SEGI_35648 Sequoiadendron giganteum HOM05D003977 ORTHO05D004536 1.5e-18 96.7 114 41.2
CSS0026343 Camellia sinensis var. sinensis HOM05D003977 ORTHO05D004536 2.5e-18 95.9 114 47.4
Pp3c19_9596 Physcomitrium patens HOM05D003977 ORTHO05D004536 2.5e-18 95.9 118 46.6
Hma1.2p1_1036F.1_g250510 Hydrangea macrophylla HOM05D000462 ORTHO05D004536 3.3e-18 95.5 95 51.6
Pp3c9_2440 Physcomitrium patens HOM05D003977 ORTHO05D004536 3.3e-18 95.5 115 45.2
Hund13302 Selenicereus undatus HOM05D003977 ORTHO05D004536 3.3e-18 95.5 105 47.6
PSO478G5179 Papaver somniferum HOM05D003977 ORTHO05D004536 7.4e-18 94.4 95 48.4
Mapoly0131s0020 Marchantia polymorpha HOM05D003977 ORTHO05D004536 1.4e-16 90.1 127 40.9
Eucgr.G03211 Eucalyptus grandis HOM05D003977 ORTHO05D004536 3.1e-16 89.0 112 40.2
BcaC01g04055 Brassica carinata HOM05D003977 ORTHO05D004536 2.1e-12 76.3 86 44.2
AagrBONN_evm.TU.Sc2ySwM_362.2961 Anthoceros agrestis HOM05D003977 ORTHO05D004536 6.7e-11 71.2 112 38.4
Os11g0533500 Oryza sativa ssp. japonica HOM05D003977 ORTHO05D004536 1.4e-08 63.5 107 32.7
SMO141G0281 Selaginella moellendorffii HOM05D003977 ORTHO05D004536 2.0e-07 59.7 112 34.8


User provided reference genes

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