Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2202 Salvia bowleyana HOM05D002282 ORTHO05D002403 1.8e-105 386.0 200 100.0
MSTRG.10121 Avicennia marina HOM05D002282 ORTHO05D002403 3.8e-55 218.8 190 63.7
SGA_v2.0_scaffold146G36232 Striga asiatica HOM05D002282 ORTHO05D002403 1.5e-51 206.8 190 63.2
Migut.G00119 Erythranthe guttata HOM05D002282 ORTHO05D002403 2.8e-50 202.6 191 60.7
Oeu006431.1 Olea europaea HOM05D002282 ORTHO05D002403 1.9e-46 189.9 191 59.2
PGSC0003DMG400011805 Solanum tuberosum HOM05D002282 ORTHO05D002403 1.2e-43 180.6 191 57.1
Solyc02g030080.4 Solanum lycopersicum HOM05D002282 ORTHO05D002403 1.7e-42 176.8 187 57.2
Sopen02g009400 Solanum pennellii HOM05D002282 ORTHO05D002403 1.7e-42 176.8 187 57.2
Peaxi162Scf00065g01016 Petunia axillaris HOM05D002282 ORTHO05D002403 1.1e-41 174.1 192 53.6
TAR365G0623 Trochodendron aralioides HOM05D002282 ORTHO05D002403 9.2e-41 171.0 193 53.4
CAN.G306.6 Capsicum annuum HOM05D002282 ORTHO05D002403 1.0e-39 167.5 188 55.3
vmacro02293 Vaccinium macrocarpon HOM05D002282 ORTHO05D002403 1.3e-39 167.2 188 51.1
Nitab4.5_0000378g0050 Nicotiana tabacum HOM05D002282 ORTHO05D002403 3.8e-39 165.6 187 54.5
Nitab4.5_0001298g0020 Nicotiana tabacum HOM05D002282 ORTHO05D002403 1.1e-38 164.1 193 51.8
DCAR_027041 Daucus carota HOM05D002282 ORTHO05D002403 7.3e-38 161.4 193 52.3
TWI09G1448 Tripterygium wilfordii HOM05D002282 ORTHO05D002403 9.5e-38 161.0 192 52.1
Cc03_g01330 Coffea canephora HOM05D002282 ORTHO05D002403 2.8e-37 159.5 191 52.9
unitig_37.g12403 Utricularia gibba HOM05D002282 ORTHO05D002403 8.0e-37 157.9 198 46.5
Dinv29708 Davidia involucrata HOM05D002282 ORTHO05D002403 1.2e-35 154.1 167 54.5
Lsat_1_v5_gn_6_76141 Lactuca sativa HOM05D002282 ORTHO05D002403 7.5e-35 151.4 175 46.9
GSVIVG01035079001 Vitis vinifera HOM05D002282 ORTHO05D002403 1.7e-34 150.2 200 50.5
ECA240G0914 Erigeron canadensis HOM05D002282 ORTHO05D002403 3.7e-34 149.1 157 51.0
CSS0020497 Camellia sinensis var. sinensis HOM05D002282 ORTHO05D002403 1.8e-33 146.7 192 49.5
Haze_04567 Corylus avellana HOM05D002282 ORTHO05D002403 9.2e-33 144.4 192 49.0
Prupe.1G129200 Prunus persica HOM05D002282 ORTHO05D002403 1.6e-32 143.7 193 50.8
Lj5A688G9 Lonicera japonica HOM05D002282 ORTHO05D002403 4.6e-32 142.1 143 53.1
Rhsim02G0006600 Rhododendron simsii HOM05D002282 ORTHO05D002403 6.0e-32 141.7 165 48.5
HanXRQChr03g0084951 Helianthus annuus HOM05D002282 ORTHO05D002403 1.0e-31 141.0 161 47.8
Lj3A826G75 Lonicera japonica HOM05D002282 ORTHO05D002403 1.3e-31 140.6 144 53.5
Cfa015451 Carpinus fangiana HOM05D002282 ORTHO05D002403 1.7e-31 140.2 190 47.4
RcHm_v2.0_Chr4g0423831 Rosa chinensis HOM05D002282 ORTHO05D002403 2.3e-31 139.8 197 46.7
Duzib052G0572 Durio zibethinus HOM05D002282 ORTHO05D002403 3.0e-31 139.4 193 49.7
FAN05G0042 Fragaria x ananassa HOM05D002282 ORTHO05D002403 3.0e-31 139.4 196 44.9
Ciclev10004544m.g Citrus clementina HOM05D002282 ORTHO05D002403 8.6e-31 137.9 192 45.8
FAN09G1184 Fragaria x ananassa HOM05D002282 ORTHO05D002403 8.6e-31 137.9 196 44.4
FAN02G0515 Fragaria x ananassa HOM05D002282 ORTHO05D002403 2.5e-30 136.3 193 45.6
Cfa006257 Carpinus fangiana HOM05D002282 ORTHO05D004557 5.6e-30 135.2 196 46.9
CiPaw.01G144200 Carya illinoinensis HOM05D002282 ORTHO05D002403 9.5e-30 134.4 191 45.0
EL10Ac3g04935 Beta vulgaris HOM05D002282 ORTHO05D002403 1.6e-29 133.7 202 47.5
THA.LOC104805829 Tarenaya hassleriana HOM05D002282 ORTHO05D002403 1.6e-29 133.7 188 45.7
Thecc.04G291300 Theobroma cacao HOM05D002282 ORTHO05D002403 1.6e-29 133.7 194 49.5
MD13G1161900 Malus domestica HOM05D002282 ORTHO05D002403 6.2e-29 131.7 191 46.6
Sed0017061 Sechium edule HOM05D002282 ORTHO05D002403 6.2e-29 131.7 193 44.6
Cpa.g.sc9.113 Carica papaya HOM05D002282 ORTHO05D002403 1.1e-28 131.0 206 42.7
Nn8g40612 Nelumbo nucifera HOM05D002282 ORTHO05D002403 1.1e-28 131.0 197 46.2
Carub.0006s0971 Capsella rubella HOM05D002282 ORTHO05D002403 1.4e-28 130.6 202 42.1
Sabra10G0004600 Salix brachista HOM05D002282 ORTHO05D002403 1.4e-28 130.6 171 48.0
AL6G21870 Arabidopsis lyrata HOM05D002282 ORTHO05D002403 1.8e-28 130.2 199 43.2
Hund11944 Selenicereus undatus HOM05D002282 ORTHO05D002403 2.3e-28 129.8 171 46.8
arahy.Tifrunner.gnm1.ann1.3PI56D Arachis hypogaea HOM05D002282 ORTHO05D002403 4.0e-28 129.0 194 46.9
Potri.010G005400 Populus trichocarpa HOM05D002282 ORTHO05D002403 5.2e-28 128.6 199 48.2
QL06p010943 Quercus lobata HOM05D002282 ORTHO05D002403 5.2e-28 128.6 196 45.4
arahy.Tifrunner.gnm1.ann1.C0TKG5 Arachis hypogaea HOM05D002282 ORTHO05D002403 8.9e-28 127.9 192 47.4
MD16G1161700 Malus domestica HOM05D002282 ORTHO05D002403 1.2e-27 127.5 190 45.8
MELO3C021295.2 Cucumis melo HOM05D002282 ORTHO05D002403 2.0e-27 126.7 151 49.7
A10p26480 Brassica napus HOM05D002282 ORTHO05D002403 3.4e-27 125.9 198 41.9
ClCG06G004860 Citrullus lanatus HOM05D002282 ORTHO05D002403 4.4e-27 125.6 196 43.4
MBI19_g05149_MAGBIO Magnolia biondii HOM05D002282 ORTHO05D002403 5.8e-27 125.2 171 46.8
BolC9t59386H Brassica oleracea HOM05D002282 ORTHO05D002403 1.7e-26 123.6 199 42.2
CANSAT35G1122 Cannabis sativa HOM05D002282 ORTHO05D002403 2.2e-26 123.2 191 45.5
BraA10t44705Z Brassica rapa HOM05D002282 ORTHO05D002403 2.9e-26 122.9 198 41.9
Manes.15G008900 Manihot esculenta HOM05D002282 ORTHO05D002403 2.9e-26 122.9 206 44.2
A02p00910 Brassica napus HOM05D002282 ORTHO05D002403 3.7e-26 122.5 188 43.6
Eucgr.A01301 Eucalyptus grandis HOM05D002282 ORTHO05D002403 3.7e-26 122.5 191 42.4
Haze_01137 Corylus avellana HOM05D002282 ORTHO05D002403 4.9e-26 122.1 231 40.3
BcaC04g19248 Brassica carinata HOM05D002282 ORTHO05D002403 1.1e-25 120.9 199 41.7
C09p65630 Brassica napus HOM05D002282 ORTHO05D002403 1.1e-25 120.9 199 41.7
Lj4g0005439 Lotus japonicus HOM05D002282 ORTHO05D002403 1.4e-25 120.6 187 43.3
Lj4g0022588 Lotus japonicus HOM05D002282 ORTHO05D002403 1.4e-25 120.6 187 43.3
Ah.04g155130 Amaranthus hybridus HOM05D002282 ORTHO05D002403 1.9e-25 120.2 197 43.7
Sp6g32320 Schrenkiella parvula HOM05D002282 ORTHO05D002403 1.9e-25 120.2 195 41.5
Aqoxy7G01538 Aquilegia oxysepala HOM05D002282 ORTHO05D002403 2.4e-25 119.8 201 39.3
CARHR202090 Cardamine hirsuta HOM05D002282 ORTHO05D002403 2.4e-25 119.8 199 41.2
CsaV3_6G022650 Cucumis sativus L. HOM05D002282 ORTHO05D002403 3.2e-25 119.4 197 42.1
Gorai.006G077500 Gossypium raimondii HOM05D002282 ORTHO05D002403 3.2e-25 119.4 198 43.9
Lalb_Chr12g0201081 Lupinus albus HOM05D002282 ORTHO05D002403 4.1e-25 119.0 186 42.5
AT5G11240 Arabidopsis thaliana HOM05D002282 ORTHO05D002403 5.4e-25 118.6 202 41.6
Gohir.A09G063800 Gossypium hirsutum HOM05D002282 ORTHO05D002403 5.4e-25 118.6 170 47.1
BcaB08g37077 Brassica carinata HOM05D002282 ORTHO05D002403 9.2e-25 117.9 175 44.0
Psat4g024880 Pisum sativum HOM05D002282 ORTHO05D002403 1.2e-24 117.5 166 45.2
VMungo1215G3370 Vigna mungo HOM05D002282 ORTHO05D002403 1.2e-24 117.5 203 41.9
BcaNung01920 Brassica carinata HOM05D002282 ORTHO05D002403 1.6e-24 117.1 206 42.2
Ca_21469_v3 Cicer arietinum L. HOM05D002282 ORTHO05D002403 2.7e-24 116.3 184 42.9
Thhalv10012983m.g Eutrema salsugineum HOM05D002282 ORTHO05D002403 6.0e-24 115.2 190 42.6
Phvul.003G108800 Phaseolus vulgaris HOM05D002282 ORTHO05D002403 1.3e-23 114.0 200 41.0
Gohir.D09G062700 Gossypium hirsutum HOM05D002282 ORTHO05D002403 2.3e-23 113.2 204 41.7
CAN.G14.16 Capsicum annuum HOM05D002282 ORTHO05D002403 6.6e-23 111.7 116 52.6
TPR.G4827 Trifolium pratense HOM05D002282 ORTHO05D002403 6.6e-23 111.7 191 43.5
AUR62016160 Chenopodium quinoa HOM05D002282 ORTHO05D002403 1.1e-22 110.9 144 45.8
BraA02t05075Z Brassica rapa HOM05D002282 ORTHO05D002403 1.5e-22 110.5 188 40.4
CDE05G3405 Ceratophyllum demersum HOM05D002282 ORTHO05D002403 3.3e-22 109.4 188 38.8
AUR62035074 Chenopodium quinoa HOM05D002282 ORTHO05D002403 9.5e-22 107.8 144 45.1
Medtr4g120740 Medicago truncatula HOM05D002282 ORTHO05D002403 9.5e-22 107.8 189 42.3
PSO170G5250 Papaver somniferum HOM05D002282 ORTHO05D002403 3.6e-21 105.9 174 42.5
PGR031G2323 Punica granatum HOM05D002282 ORTHO05D002403 8.1e-21 104.8 171 39.8
Aa31LG3G15950 Aethionema arabicum HOM05D002282 ORTHO05D002403 6.8e-20 101.7 158 40.5
CDE11G1255 Ceratophyllum demersum HOM05D002282 ORTHO05D002403 1.5e-19 100.5 191 35.1
PSO407G0173 Papaver somniferum HOM05D002282 ORTHO05D002403 1.5e-19 100.5 190 41.1
Atru.chr4.2932 Acer truncatum HOM05D002282 ORTHO05D002403 2.6e-19 99.8 191 41.4
Nitab4.5_0004432g0020 Nicotiana tabacum HOM05D002282 ORTHO05D002403 7.5e-19 98.2 223 37.7
Zm00001eb013980 Zea mays HOM05D002282 ORTHO05D002403 2.9e-18 96.3 202 36.1
Glyma.17G029800 Glycine max HOM05D002282 ORTHO05D002403 1.6e-16 90.5 194 36.6
Os03g0300300 Oryza sativa ssp. japonica HOM05D002282 ORTHO05D002403 6.0e-16 88.6 202 33.2
Glyma.07G244100 Glycine max HOM05D002282 ORTHO05D002403 7.8e-16 88.2 194 36.6
HPP92_021476 Vanilla planifolia HOM05D002282 ORTHO05D002403 2.3e-15 86.7 193 38.3
Actinidia14272 Actinidia chinensis HOM05D002282 ORTHO05D002403 1.8e-12 77.0 117 40.2
ATR0693G215 Amborella trichopoda HOM05D002282 ORTHO05D002403 1.8e-12 77.0 207 32.9
SalBow6G6907 Salvia bowleyana HOM05D035506 ORTHO05D002403 1.1e-09 67.8 41 87.8
FvH4_6g31810 Fragaria vesca HOM05D002282 ORTHO05D002403 4.1e-09 65.9 80 45.0
vmacro13795 Vaccinium macrocarpon HOM05D002282 ORTHO05D002403 9.2e-09 64.7 73 46.6
COL.COLO4_34694 Corchorus olitorius HOM05D002282 ORTHO05D002403 2.7e-08 63.2 76 48.7
Sc19g0003390 Simmondsia chinensis HOM05D002282 ORTHO05D002403 6.0e-08 62.0 75 41.3
Dinv44338 Davidia involucrata HOM05D002282 ORTHO05D002403 7.3e-06 55.1 62 53.2
Actinidia13377 Actinidia chinensis HOM05D002282 ORTHO05D002403 9.6e-06 54.7 59 50.8


User provided reference genes

Program Settings