Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.9e-170 602.4 303 100.0
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.0e-160 570.1 295 96.9
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 5.6e-151 537.7 303 88.4
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.7e-147 526.2 300 87.0
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.1e-146 523.5 303 86.5
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 2.1e-142 509.2 301 82.7
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.5e-140 503.1 300 83.0
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.0e-139 500.4 303 80.9
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.3e-139 500.0 303 80.9
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.7e-139 499.6 303 80.5
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.7e-139 499.6 299 82.9
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 2.2e-139 499.2 300 81.0
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 3.2e-138 495.4 303 80.5
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 4.2e-138 495.0 303 81.5
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 9.3e-138 493.8 302 79.8
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 9.3e-138 493.8 302 80.5
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.2e-137 493.4 299 81.6
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.2e-137 493.4 303 78.5
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.6e-137 493.0 303 79.2
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.6e-137 493.0 303 79.2
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.6e-137 493.0 303 80.9
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 2.1e-137 492.7 303 78.9
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 2.7e-137 492.3 303 80.9
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.6e-137 491.9 303 79.2
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 6.1e-137 491.1 299 80.6
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.0e-136 490.3 303 78.5
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.3e-136 490.0 303 80.9
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.3e-136 490.0 303 79.2
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.3e-136 490.0 303 79.2
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.8e-136 489.6 300 80.7
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.8e-136 489.6 303 78.9
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 2.3e-136 489.2 300 79.7
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.3e-136 489.2 303 80.9
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 3.9e-136 488.4 303 77.9
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 5.1e-136 488.0 300 79.7
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 5.1e-136 488.0 300 79.3
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 6.7e-136 487.6 303 80.2
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.1e-135 486.9 303 80.5
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.5e-135 486.5 300 79.7
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 2.5e-135 485.7 302 79.8
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 2.5e-135 485.7 300 79.3
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 3.3e-135 485.3 300 79.3
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 3.3e-135 485.3 300 79.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.4e-135 484.2 303 79.5
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.6e-134 483.0 303 78.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.8e-134 482.3 303 78.9
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.8e-134 482.3 303 78.9
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 2.8e-134 482.3 303 79.2
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 3.7e-134 481.9 303 79.2
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 1.4e-133 479.9 303 77.9
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 3.1e-133 478.8 299 78.6
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.3e-133 478.0 300 78.3
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.2e-132 476.9 300 77.7
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.5e-132 476.5 299 78.3
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 7.7e-132 474.2 300 77.7
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 4.2e-130 468.4 303 77.2
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 5.5e-130 468.0 303 76.6
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 8.8e-128 460.7 303 76.2
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 7.4e-127 457.6 305 76.1
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.3e-126 456.8 300 73.3
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.7e-126 456.4 302 75.2
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 6.3e-126 454.5 304 74.7
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.4e-125 452.6 306 74.2
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 4.1e-125 451.8 303 73.9
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.2e-124 450.3 302 73.8
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 3.4e-124 448.7 304 74.3
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-123 446.8 303 73.9
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 2.9e-123 445.7 302 73.2
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 6.5e-123 444.5 302 72.5
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.5e-123 444.1 221 99.1
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 1.1e-122 443.7 302 72.5
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.1e-122 443.7 311 72.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.9e-122 443.0 303 72.6
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.5e-122 442.6 300 72.3
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 5.5e-122 441.4 302 72.5
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 2.1e-121 439.5 305 72.5
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.7e-121 439.1 302 72.5
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 3.6e-121 438.7 302 72.2
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 4.7e-121 438.3 303 72.3
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.7e-121 438.3 302 72.2
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.7e-121 438.3 302 72.2
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.0e-120 437.2 306 72.2
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.8e-120 436.4 300 72.0
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 2.3e-120 436.0 303 72.3
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 2.3e-120 436.0 302 72.2
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 2.3e-120 436.0 303 72.3
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 2.3e-120 436.0 303 72.3
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.3e-120 436.0 306 72.9
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 3.0e-120 435.6 302 72.5
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 5.2e-120 434.9 306 72.9
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 2.6e-119 432.6 287 74.6
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 9.7e-119 430.6 225 95.1
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 2.8e-118 429.1 305 72.8
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.8e-118 429.1 303 71.6
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.1e-117 427.2 300 70.3
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 7.0e-117 424.5 300 70.3
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.7e-115 419.9 275 76.4
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 5.5e-114 414.8 251 80.5
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.2e-111 407.1 251 78.9
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.3e-104 382.9 300 64.7
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 7.5e-103 377.9 234 79.1
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.7e-102 376.7 277 70.0
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 6.3e-102 374.8 299 63.9
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.7e-99 366.7 225 79.1
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.5e-95 353.6 218 80.7
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.5e-95 353.6 235 73.6
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 3.4e-95 352.4 306 58.8
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 7.5e-95 351.3 248 68.1
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.7e-94 350.1 215 79.1
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 4.3e-90 335.5 254 65.7
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 4.4e-87 325.5 277 59.6
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 2.8e-81 306.2 300 56.3
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 2.0e-79 300.1 339 51.0
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 7.3e-74 281.6 173 78.0
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.9e-62 243.0 318 45.3
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 2.4e-53 213.4 143 77.6
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 6.4e-46 188.7 163 58.9
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 6.0e-44 182.2 343 36.4
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.1e-42 177.9 177 54.2
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 3.7e-41 172.9 303 38.6
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.5e-39 167.5 105 79.0
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 2.4e-32 143.7 88 73.9
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 2.2e-30 137.1 91 72.5
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 6.0e-28 129.0 91 73.6
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.5e-26 124.4 351 30.5
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 4.3e-26 122.9 86 75.6
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.1e-24 118.2 138 50.7
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 5.9e-23 112.5 72 70.8
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 3.3e-18 96.7 64 76.6
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.0e-14 85.1 60 60.0
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 5.0e-14 82.8 46 82.6


User provided reference genes

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