Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 2.3e-140 502.7 340 100.0
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 7.3e-107 391.3 387 65.1
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 2.0e-104 383.3 388 63.9
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 1.4e-97 360.5 405 66.4
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 5.3e-97 358.6 361 62.0
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 5.3e-97 358.6 361 62.0
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 1.9e-94 350.1 370 58.9
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.4e-94 349.7 370 58.6
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 5.4e-94 348.6 370 58.9
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 6.0e-93 345.1 390 55.1
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 7.9e-93 344.7 391 57.5
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 3.0e-92 342.8 381 56.4
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 5.1e-92 342.0 370 57.6
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 6.7e-92 341.7 396 54.5
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 1.5e-91 340.5 365 57.8
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 1.5e-91 340.5 362 58.3
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 4.3e-91 339.0 395 58.2
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 5.6e-91 338.6 398 56.0
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 5.6e-91 338.6 364 56.3
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 5.6e-91 338.6 360 58.9
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 7.4e-91 338.2 403 56.6
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 9.6e-91 337.8 358 57.8
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 1.3e-90 337.4 404 53.5
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 1.3e-90 337.4 404 53.5
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.3e-90 337.4 265 69.8
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 2.1e-90 336.7 391 54.7
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 4.8e-90 335.5 265 69.8
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 8.1e-90 334.7 357 56.0
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 1.1e-89 334.3 379 55.1
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 1.4e-89 334.0 370 56.5
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 1.8e-89 333.6 391 56.0
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 3.1e-89 332.8 361 57.6
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 9.0e-89 331.3 362 56.1
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 1.5e-88 330.5 388 55.2
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 1.5e-88 330.5 361 57.1
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 4.5e-88 328.9 266 67.3
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 7.6e-88 328.2 388 53.9
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 7.6e-88 328.2 361 56.8
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 7.6e-88 328.2 425 54.8
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.0e-87 327.8 344 58.4
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 2.9e-87 326.2 262 69.1
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 4.9e-87 325.5 365 55.9
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 6.5e-87 325.1 380 56.3
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 3.2e-86 322.8 299 62.2
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 3.2e-86 322.8 266 66.9
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 7.1e-86 321.6 266 66.5
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 9.3e-86 321.2 264 66.7
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 9.3e-86 321.2 389 57.8
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 1.6e-85 320.5 266 66.2
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 2.1e-85 320.1 262 67.6
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 2.7e-85 319.7 362 55.2
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 2.7e-85 319.7 437 51.7
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 4.6e-85 318.9 366 56.6
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 6.0e-85 318.5 367 55.0
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 6.0e-85 318.5 390 55.1
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 6.0e-85 318.5 262 66.4
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 6.0e-85 318.5 262 66.4
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 1.8e-84 317.0 377 53.8
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 3.0e-84 316.2 358 55.9
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 5.1e-84 315.5 266 65.4
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 6.7e-84 315.1 364 53.6
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 6.7e-84 315.1 380 56.8
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 3.3e-83 312.8 387 55.6
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 3.3e-83 312.8 364 56.6
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 5.7e-83 312.0 366 53.0
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 7.4e-83 311.6 412 53.2
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 9.6e-83 311.2 262 64.5
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 9.6e-83 311.2 266 64.7
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 1.3e-82 310.8 369 53.4
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 1.6e-82 310.5 265 64.5
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.6e-82 310.5 266 64.7
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 2.1e-82 310.1 261 65.9
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 3.7e-82 309.3 265 64.2
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.1e-81 307.8 360 53.9
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.1e-81 307.8 360 53.9
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 2.4e-81 306.6 362 52.8
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.4e-81 306.6 362 53.9
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 4.1e-81 305.8 358 53.4
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 6.9e-81 305.1 362 52.2
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 6.9e-81 305.1 362 52.2
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 9.0e-81 304.7 266 63.2
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 1.5e-80 303.9 366 51.9
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 2.0e-80 303.5 362 52.5
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 2.6e-80 303.1 266 62.0
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.6e-80 303.1 410 53.7
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 3.4e-80 302.8 268 61.6
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 4.5e-80 302.4 370 51.4
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 7.6e-80 301.6 413 49.2
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.4e-78 297.4 395 50.4
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 1.4e-78 297.4 348 52.9
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 1.9e-78 297.0 263 63.1
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 3.5e-77 292.7 324 56.2
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 3.5e-77 292.7 415 50.4
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 4.6e-77 292.4 368 50.5
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.3e-75 285.8 370 51.4
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 3.7e-74 282.7 240 65.4
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 9.0e-73 278.1 245 63.3
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.9e-72 275.4 242 64.0
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 3.2e-70 269.6 331 52.9
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.1e-69 265.4 242 62.8
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 6.3e-66 255.4 266 52.6
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 5.0e-63 245.7 268 50.7
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 2.5e-62 243.4 364 45.3
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.6e-61 240.7 266 50.4
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 6.7e-60 235.3 263 51.3
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.7e-58 230.7 224 60.3
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 1.0e-55 221.5 229 54.1
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.9e-55 219.9 263 48.7
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.9e-55 219.9 263 48.7
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 3.0e-52 209.9 259 45.6
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 8.8e-52 208.4 263 44.9
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 2.2e-50 203.8 259 43.6
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 3.2e-46 189.9 282 46.5
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 4.2e-46 189.5 282 45.0
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.8e-44 184.1 119 82.4
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 5.7e-43 179.1 235 62.6
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 3.1e-41 173.3 326 40.5
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 4.1e-41 172.9 244 47.1
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.9e-40 169.1 220 48.6
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.7e-40 168.7 197 52.8
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 5.6e-30 136.0 157 48.4
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.2e-30 135.6 109 72.5
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 9.8e-27 125.2 95 62.1
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 2.2e-26 124.0 76 78.9
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.0e-23 115.2 101 70.3
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 8.3e-18 95.5 64 71.9
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.0e-16 90.9 113 45.1
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.2e-08 65.1 155 27.1
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 3.0e-07 60.5 44 63.6


User provided reference genes

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