Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 1.2e-129 466.5 231 100.0
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 6.3e-86 321.2 197 77.2
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 5.4e-85 318.2 214 71.5
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 2.3e-83 312.8 212 68.4
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 3.3e-82 308.9 210 69.5
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 5.5e-82 308.1 204 70.1
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 5.5e-82 308.1 213 69.0
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.2e-81 307.0 205 71.2
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 3.6e-81 305.4 216 66.2
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 1.5e-79 300.1 207 67.6
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 2.0e-79 299.7 198 69.2
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 2.0e-79 299.7 208 65.9
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 2.6e-79 299.3 204 69.1
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 2.6e-79 299.3 208 67.3
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 3.4e-79 298.9 220 65.9
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 5.7e-79 298.1 197 69.5
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 9.8e-79 297.4 212 66.0
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 1.3e-78 297.0 195 70.3
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 1.3e-78 297.0 214 65.0
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 3.7e-78 295.4 212 67.9
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 6.3e-78 294.7 234 62.0
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 8.3e-78 294.3 211 65.9
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 1.1e-77 293.9 208 66.8
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 1.8e-77 293.1 208 64.4
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 2.4e-77 292.7 223 60.5
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.4e-77 292.7 210 63.3
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 3.1e-77 292.4 204 66.2
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 7.0e-77 291.2 212 64.6
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 1.2e-76 290.4 197 69.5
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 2.0e-76 289.7 222 61.7
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.0e-76 289.7 211 64.9
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 2.0e-76 289.7 211 64.9
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 2.7e-76 289.3 194 71.1
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 3.5e-76 288.9 209 64.6
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 5.9e-76 288.1 209 63.2
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 7.8e-76 287.7 197 67.0
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 1.3e-75 287.0 212 65.6
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 2.3e-75 286.2 212 64.6
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 2.9e-75 285.8 210 65.7
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 5.0e-75 285.0 204 66.2
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 8.6e-75 284.3 197 66.0
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.9e-74 283.1 202 64.4
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 1.9e-74 283.1 210 64.3
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 3.3e-74 282.3 229 59.4
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 5.6e-74 281.6 221 59.3
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 7.3e-74 281.2 212 62.3
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 9.5e-74 280.8 219 61.6
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 9.5e-74 280.8 213 62.4
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 1.6e-73 280.0 212 62.7
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 3.6e-73 278.9 219 61.2
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 3.6e-73 278.9 213 63.4
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 4.7e-73 278.5 195 68.2
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 4.7e-73 278.5 212 63.2
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 6.1e-73 278.1 215 62.8
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 6.1e-73 278.1 210 63.8
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 8.0e-73 277.7 194 65.5
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.0e-72 277.3 208 65.9
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.4e-72 276.9 215 61.9
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 1.8e-72 276.6 215 61.9
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 2.3e-72 276.2 193 69.9
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 3.0e-72 275.8 208 61.5
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 4.0e-72 275.4 216 62.0
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.5e-71 273.5 227 60.8
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 2.6e-71 272.7 187 67.9
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 2.6e-71 272.7 193 67.4
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 7.5e-71 271.2 203 64.0
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 1.3e-67 260.4 172 74.4
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 9.5e-66 254.2 210 59.0
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 8.9e-64 247.7 193 64.8
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.4e-61 240.4 172 69.2
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.6e-60 236.9 202 56.4
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 4.6e-60 235.3 193 58.5
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 1.0e-59 234.2 215 55.3
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 8.9e-56 221.1 196 56.1
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 1.2e-55 220.7 192 56.2
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 4.1e-53 212.2 192 53.6
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 3.0e-51 206.1 168 63.1
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 8.6e-51 204.5 148 63.5
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 1.6e-49 200.3 215 48.8
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.8e-48 196.8 162 63.6
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 3.2e-45 186.0 132 68.9
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 2.1e-44 183.3 123 68.3
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 2.3e-43 179.9 208 43.3
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 8.1e-41 171.4 212 42.5
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 1.2e-39 167.5 121 68.6
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 5.6e-34 148.7 96 67.7
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.4e-32 143.3 169 49.7
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 3.8e-30 136.0 110 62.7
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.6e-28 130.6 96 64.6
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 9.6e-26 121.3 105 57.1
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 2.1e-25 120.2 198 38.4
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 2.8e-25 119.8 95 61.1
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 4.0e-24 115.9 80 67.5
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.6e-15 86.7 73 63.0
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 4.9e-14 82.4 122 39.3
PRCOL_00002242 Prasinoderma coloniale HOM05D060700 ORTHO05D009694 6.5e-06 55.5 159 30.8


User provided reference genes

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