Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0531 Salvia bowleyana HOM05D004465 ORTHO05D351996 1.2e-36 156.0 76 100.0
Actinidia00724 Actinidia chinensis HOM05D004465 ORTHO05D005450 3.9e-08 61.2 64 54.7
Hma1.2p1_0628F.1_g191790 Hydrangea macrophylla HOM05D004465 ORTHO05D005450 4.3e-07 57.8 36 75.0
Actinidia24311 Actinidia chinensis HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
CSS0023645 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
CSS0050172 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
CAN.G956.9 Capsicum annuum HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Cc04_g13300 Coffea canephora HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Dinv32970 Davidia involucrata HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Migut.D00252 Erythranthe guttata HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
HanXRQChr15g0466601 Helianthus annuus HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Lsat_1_v5_gn_2_2880 Lactuca sativa HOM05D004465 ORTHO05D005450 7.3e-07 57.0 30 86.7
Lsat_1_v5_gn_9_1881 Lactuca sativa HOM05D004465 ORTHO05D005450 7.3e-07 57.0 30 86.7
Lj1A45T35 Lonicera japonica HOM05D004465 ORTHO05D005450 7.3e-07 57.0 37 70.3
Lju41A26G23 Lonicera japonica HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Nitab4.5_0001323g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Nitab4.5_0002927g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Oeu006227.1 Olea europaea HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
PSO170G6090 Papaver somniferum HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
PSO302G0160 Papaver somniferum HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Peaxi162Scf00941g00114 Petunia axillaris HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Rhsim13G0021500 Rhododendron simsii HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
SalBow3G2805 Salvia bowleyana HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Solyc09g074090.3 Solanum lycopersicum HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Sopen09g028910 Solanum pennellii HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
PGSC0003DMG400003807 Solanum tuberosum HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
vmacro02540 Vaccinium macrocarpon HOM05D004465 ORTHO05D005450 7.3e-07 57.0 33 78.8
Os04g0520000 Oryza sativa ssp. japonica HOM05D004465 ORTHO05D005450 9.6e-07 56.6 33 75.8
TAR633G0251 Trochodendron aralioides HOM05D004465 ORTHO05D005450 9.6e-07 56.6 33 75.8
unitig_0.g1195 Utricularia gibba HOM05D004465 ORTHO05D005450 9.6e-07 56.6 33 75.8
Zm00001eb067490 Zea mays HOM05D004465 ORTHO05D005450 9.6e-07 56.6 33 75.8
CANSAT25G0403 Cannabis sativa HOM05D004465 ORTHO05D005450 1.2e-06 56.2 33 75.8
Eucgr.H01542 Eucalyptus grandis HOM05D004465 ORTHO05D005450 1.6e-06 55.8 33 75.8
Nn1g08362 Nelumbo nucifera HOM05D004465 ORTHO05D005450 1.6e-06 55.8 33 72.7
Oeu047890.1 Olea europaea HOM05D004465 ORTHO05D005450 1.6e-06 55.8 33 75.8
Sed0001639 Sechium edule HOM05D004465 ORTHO05D005450 1.6e-06 55.8 33 75.8
CDE05G1996 Ceratophyllum demersum HOM05D004465 ORTHO05D005450 2.1e-06 55.5 33 72.7
GSVIVG01011064001 Vitis vinifera HOM05D004465 ORTHO05D005450 2.1e-06 55.5 33 72.7
PGR119G1155 Punica granatum HOM05D004465 ORTHO05D005450 2.8e-06 55.1 33 72.7
ClCG04G004880 Citrullus lanatus HOM05D004465 ORTHO05D005450 3.6e-06 54.7 33 72.7
MELO3C008880.2 Cucumis melo HOM05D004465 ORTHO05D005450 3.6e-06 54.7 33 72.7
MSTRG.21585 Avicennia marina HOM05D004465 ORTHO05D005450 4.7e-06 54.3 33 75.8
MBI19_g15845_MAGBIO Magnolia biondii HOM05D004465 ORTHO05D005450 4.7e-06 54.3 33 66.7
ECA247G0279 Erigeron canadensis HOM05D004465 ORTHO05D005450 6.2e-06 53.9 33 75.8
Aqoxy2G03197 Aquilegia oxysepala HOM05D004465 ORTHO05D005450 8.1e-06 53.5 33 66.7
CANSAT25G2682 Cannabis sativa HOM05D004465 ORTHO05D005450 8.1e-06 53.5 33 69.7
CsaV3_1G000270 Cucumis sativus L. HOM05D004465 ORTHO05D005450 8.1e-06 53.5 36 66.7


User provided reference genes

Program Settings