Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 6.6e-57 224.6 190 100.0
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.3e-49 200.3 109 90.8
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 1.3e-33 147.1 101 76.2
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 9.6e-32 141.0 109 69.7
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 1.3e-31 140.6 111 68.5
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 6.3e-31 138.3 110 70.0
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 6.3e-31 138.3 98 74.5
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 8.2e-31 137.9 110 69.1
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 1.1e-30 137.5 107 69.2
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.4e-30 136.3 109 67.9
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 2.4e-30 136.3 106 67.9
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 3.1e-30 136.0 105 73.3
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 4.1e-30 135.6 107 68.2
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 5.3e-30 135.2 115 66.1
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 5.3e-30 135.2 107 68.2
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 9.0e-30 134.4 106 67.9
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.2e-29 134.0 99 71.7
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 3.4e-29 132.5 114 65.8
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 4.5e-29 132.1 100 69.0
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 5.9e-29 131.7 109 66.1
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 7.6e-29 131.3 96 72.9
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 1.7e-28 130.2 106 67.9
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 1.7e-28 130.2 108 63.0
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.9e-28 129.4 109 66.1
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 2.9e-28 129.4 96 71.9
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 6.5e-28 128.3 98 71.4
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 1.1e-27 127.5 110 66.4
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 1.4e-27 127.1 115 62.6
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 1.4e-27 127.1 106 67.0
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 2.5e-27 126.3 95 70.5
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 3.2e-27 125.9 101 70.3
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 3.2e-27 125.9 106 65.1
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.2e-27 125.6 109 63.3
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 5.5e-27 125.2 92 71.7
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 5.5e-27 125.2 95 70.5
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 5.5e-27 125.2 99 64.6
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 1.2e-26 124.0 107 65.4
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 1.6e-26 123.6 109 63.3
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 1.6e-26 123.6 97 70.1
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 3.5e-26 122.5 106 65.1
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 3.5e-26 122.5 101 65.3
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 3.5e-26 122.5 100 63.0
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 7.9e-26 121.3 104 62.5
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 1.0e-25 120.9 100 66.0
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 1.3e-25 120.6 94 69.1
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 1.3e-25 120.6 107 64.5
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.3e-25 120.6 115 60.0
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 3.0e-25 119.4 68 88.2
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 3.9e-25 119.0 102 63.7
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 3.9e-25 119.0 93 69.9
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 6.7e-25 118.2 106 64.2
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 6.7e-25 118.2 106 64.2
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 6.7e-25 118.2 106 64.2
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 1.9e-24 116.7 115 59.1
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 3.3e-24 115.9 63 85.7
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 7.4e-24 114.8 106 66.0
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 9.7e-24 114.4 96 69.8
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 9.7e-24 114.4 71 83.1
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.2e-23 113.2 104 60.6
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 2.2e-23 113.2 96 65.6
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 3.7e-23 112.5 108 58.3
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 4.8e-23 112.1 66 81.8
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 4.8e-23 112.1 63 88.9
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 4.8e-23 112.1 63 88.9
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 4.8e-23 112.1 98 62.2
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 6.3e-23 111.7 64 82.8
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 6.3e-23 111.7 63 84.1
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 8.2e-23 111.3 85 69.4
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 8.2e-23 111.3 118 56.8
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 1.1e-22 110.9 108 59.3
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.4e-22 110.5 95 64.2
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.4e-22 110.5 62 83.9
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 1.8e-22 110.2 62 88.7
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 1.8e-22 110.2 62 88.7
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 2.4e-22 109.8 74 74.3
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 3.1e-22 109.4 80 68.8
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 3.1e-22 109.4 96 64.6
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 4.1e-22 109.0 95 64.2
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 4.1e-22 109.0 108 58.3
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 4.1e-22 109.0 112 54.5
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 1.2e-21 107.5 70 77.1
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 2.0e-21 106.7 64 79.7
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 7.7e-21 104.8 103 57.3
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.7e-20 103.6 52 92.3
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 2.9e-20 102.8 95 61.1
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 5.0e-20 102.1 51 94.1
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 8.5e-20 101.3 63 84.1
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.1e-19 100.9 92 62.0
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 2.7e-18 96.3 98 57.1
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.6e-18 95.5 95 57.9
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 1.4e-17 94.0 102 52.9
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.5e-16 90.5 62 71.0
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 4.3e-16 89.0 104 50.0
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.3e-15 87.4 60 70.0
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 1.1e-08 64.3 60 53.3


User provided reference genes

Program Settings