Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0071900 Salix brachista HOM05D002223 ORTHO05D004187 2.1e-52 208.8 104 100.0
Potri.018G083600 Populus trichocarpa HOM05D002223 ORTHO05D004187 4.9e-30 134.4 79 86.1
Manes.16G113200 Manihot esculenta HOM05D002223 ORTHO05D004187 4.6e-20 101.3 81 65.4
TWI34G1374 Tripterygium wilfordii HOM05D002223 ORTHO05D004187 6.1e-20 100.9 88 62.5
Duzib150G1030 Durio zibethinus HOM05D002223 ORTHO05D004187 2.4e-16 89.0 81 56.8
Actinidia20395 Actinidia chinensis HOM05D002223 ORTHO05D004187 3.1e-16 88.6 80 60.0
Gohir.D05G026400 Gossypium hirsutum HOM05D002223 ORTHO05D004187 3.1e-16 88.6 82 56.1
Gorai.009G026500 Gossypium raimondii HOM05D002223 ORTHO05D004187 3.1e-16 88.6 82 56.1
Thecc.09G106400 Theobroma cacao HOM05D002223 ORTHO05D004187 4.1e-16 88.2 81 54.3
Ciclev10007255m.g Citrus clementina HOM05D002223 ORTHO05D004187 1.5e-15 86.3 104 47.1
Dinv36664 Davidia involucrata HOM05D002223 ORTHO05D004187 8.5e-14 80.5 80 56.2
Lj7C656T11 Lonicera japonica HOM05D002223 ORTHO05D004187 1.4e-13 79.7 80 55.0
COL.COLO4_34815 Corchorus olitorius HOM05D002223 ORTHO05D004187 1.9e-13 79.3 95 43.2
Nitab4.5_0001139g0020 Nicotiana tabacum HOM05D002223 ORTHO05D004187 5.5e-13 77.8 84 52.4
HanXRQChr09g0239371 Helianthus annuus HOM05D002223 ORTHO05D004187 1.6e-12 76.3 80 52.5
Prupe.7G226000 Prunus persica HOM05D002223 ORTHO05D004187 1.6e-12 76.3 81 50.6
Eucgr.C01271 Eucalyptus grandis HOM05D002223 ORTHO05D004187 1.8e-11 72.8 86 45.3
Lsat_1_v5_gn_7_41480 Lactuca sativa HOM05D002223 ORTHO05D004187 1.8e-11 72.8 81 50.6
MD15G1191200 Malus domestica HOM05D002223 ORTHO05D004187 1.8e-11 72.8 83 53.0
Atru.chr7.1378 Acer truncatum HOM05D002223 ORTHO05D004187 3.0e-11 72.0 81 46.9
Nitab4.5_0001734g0020 Nicotiana tabacum HOM05D002223 ORTHO05D004187 3.9e-11 71.6 81 49.4
GSVIVG01015355001 Vitis vinifera HOM05D002223 ORTHO05D004187 1.1e-10 70.1 80 47.5
Cpa.g.sc23.66 Carica papaya HOM05D002223 ORTHO05D004187 3.3e-10 68.6 85 47.1
ECA240G1552 Erigeron canadensis HOM05D002223 ORTHO05D004187 5.7e-10 67.8 79 45.6
FAN23G1639 Fragaria x ananassa HOM05D001491 ORTHO05D004187 5.7e-10 67.8 89 41.6
Peaxi162Scf00231g00432 Petunia axillaris HOM05D002223 ORTHO05D004187 9.7e-10 67.0 108 42.6
Lalb_Chr22g0352691 Lupinus albus HOM05D002223 ORTHO05D004187 1.3e-09 66.6 73 46.6
DCAR_028695 Daucus carota HOM05D002223 ORTHO05D004187 1.7e-09 66.2 82 45.1
FvH4_1g05520 Fragaria vesca HOM05D002223 ORTHO05D004187 2.2e-09 65.9 89 40.4
FAN26G1558 Fragaria x ananassa HOM05D002223 ORTHO05D004187 2.8e-09 65.5 89 40.4
Lj4g0012717 Lotus japonicus HOM05D002223 ORTHO05D004187 2.8e-09 65.5 82 42.7
FAN19G2095 Fragaria x ananassa HOM05D002223 ORTHO05D004187 3.7e-09 65.1 89 40.4
FAN26G0568 Fragaria x ananassa HOM05D002223 ORTHO05D004187 3.7e-09 65.1 89 40.4
FAN28G0975 Fragaria x ananassa HOM05D002223 ORTHO05D004187 3.7e-09 65.1 89 40.4
MBI04_g04854_MAGBIO Magnolia biondii HOM05D002223 ORTHO05D004187 3.7e-09 65.1 90 45.6
Cc06_g10010 Coffea canephora HOM05D002223 ORTHO05D004187 6.3e-09 64.3 79 40.5
Medtr8g103227 Medicago truncatula HOM05D002223 ORTHO05D004187 1.1e-08 63.5 83 47.0
Oeu064906.2 Olea europaea HOM05D002223 ORTHO05D004187 1.1e-08 63.5 80 42.5
PGR142G3208 Punica granatum HOM05D002223 ORTHO05D004187 1.4e-08 63.2 93 41.9
TPR.G23456 Trifolium pratense HOM05D002223 ORTHO05D004187 1.4e-08 63.2 81 44.4
Aqoxy7G01546 Aquilegia oxysepala HOM05D002223 ORTHO05D004187 2.4e-08 62.4 61 52.5
Ca_17325_v3 Cicer arietinum L. HOM05D002223 ORTHO05D004187 2.4e-08 62.4 81 45.7
PGSC0003DMG400005092 Solanum tuberosum HOM05D002223 ORTHO05D004187 4.1e-08 61.6 83 45.8
Glyma.08G037000 Glycine max HOM05D002223 ORTHO05D004187 6.9e-08 60.8 91 39.6
Haze_25778 Corylus avellana HOM05D002223 ORTHO05D004187 9.1e-08 60.5 57 52.6
arahy.Tifrunner.gnm1.ann1.LGD3I1 Arachis hypogaea HOM05D002223 ORTHO05D004187 4.5e-07 58.2 88 37.5
Glyma.05G229600 Glycine max HOM05D002223 ORTHO05D004187 1.3e-06 56.6 82 37.8
arahy.Tifrunner.gnm1.ann1.AAED67 Arachis hypogaea HOM05D002223 ORTHO05D004187 1.7e-06 56.2 88 36.4
CANSAT02G0015 Cannabis sativa HOM05D002223 ORTHO05D004187 1.7e-06 56.2 57 50.9
VMungo0251G2909 Vigna mungo HOM05D002223 ORTHO05D004187 2.9e-06 55.5 89 38.2


User provided reference genes

Program Settings