Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 0.0e+00 1523.1 757 100.0
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 0.0e+00 1206.4 697 87.2
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 2.0e-261 906.0 706 65.9
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 1.9e-240 836.3 704 61.8
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 7.8e-234 814.3 703 62.2
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.7e-233 813.1 704 61.4
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 2.5e-232 809.3 705 62.1
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 2.5e-232 809.3 715 61.0
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.9e-227 793.1 706 60.3
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 5.6e-224 781.6 700 60.0
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 1.1e-222 777.3 707 58.4
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 1.4e-222 776.9 608 65.1
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 3.1e-222 775.8 705 58.3
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.1e-219 767.3 699 58.9
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 1.6e-218 763.5 709 57.0
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 3.5e-218 762.3 702 58.4
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.0e-217 759.2 701 58.6
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 5.1e-217 758.4 701 58.3
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.9e-216 756.5 701 58.3
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 5.6e-216 755.0 708 59.0
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 8.1e-215 751.1 701 58.3
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 8.1e-215 751.1 706 57.1
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.1e-214 750.7 702 57.0
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 3.4e-213 745.7 700 56.3
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 5.8e-213 745.0 707 57.3
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 9.9e-213 744.2 786 51.8
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 4.9e-212 741.9 703 57.0
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.4e-211 740.3 712 56.2
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.6e-210 736.9 706 56.8
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 1.6e-210 736.9 709 58.4
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 6.0e-210 734.9 706 56.7
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 2.3e-209 733.0 714 56.4
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.9e-208 729.9 640 60.2
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.1e-206 724.2 707 55.2
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 5.3e-206 721.8 629 58.5
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 2.9e-204 716.1 726 55.1
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 3.5e-202 709.1 680 56.5
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 4.6e-202 708.8 646 58.4
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 3.0e-201 706.1 616 61.0
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.4e-198 697.2 707 52.5
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 3.4e-197 692.6 687 54.6
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 4.9e-196 688.7 669 54.6
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.4e-195 687.2 670 54.5
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 2.5e-195 686.4 696 53.9
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.2e-195 686.0 701 53.6
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 6.0e-194 681.8 627 56.8
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.3e-193 680.6 702 52.8
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.3e-193 680.6 694 52.7
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.8e-193 680.2 703 53.9
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.5e-192 677.2 702 53.0
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 1.5e-192 677.2 703 52.9
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 5.7e-192 675.2 699 52.5
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 7.4e-192 674.9 611 57.3
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.6e-191 673.7 703 52.6
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 6.3e-191 671.8 703 53.6
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 7.6e-189 664.8 723 51.0
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 7.6e-189 664.8 712 51.7
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.3e-188 664.1 739 49.8
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 2.2e-188 663.3 704 52.3
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 8.5e-188 661.4 640 54.8
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.4e-187 660.6 705 51.9
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.4e-187 660.6 705 51.9
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.4e-187 660.6 661 53.7
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 3.2e-187 659.4 704 51.8
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 6.1e-186 655.2 706 51.8
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.1e-184 651.0 615 57.6
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 2.8e-183 646.4 685 51.8
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.2e-181 641.0 627 54.1
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 7.7e-181 638.3 667 53.2
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 7.2e-179 631.7 543 58.9
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.2e-178 630.9 725 48.3
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 4.8e-175 619.0 674 50.7
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.4e-174 617.5 478 67.4
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 5.0e-172 609.0 725 49.0
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 1.8e-169 600.5 635 51.3
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 5.2e-169 599.0 716 47.8
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.3e-168 596.3 662 51.1
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 1.1e-166 591.3 494 62.1
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.5e-163 580.1 669 50.1
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 5.5e-163 578.9 525 58.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 5.7e-160 568.9 656 47.4
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 4.1e-158 562.8 679 45.8
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 5.3e-158 562.4 500 59.4
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.9e-155 553.9 701 47.4
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 4.0e-153 546.2 690 49.3
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 2.0e-149 533.9 606 51.2
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.7e-143 513.1 606 50.2
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.2e-138 498.0 522 51.1
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 1.7e-135 487.6 484 53.5
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.9e-134 484.2 375 64.8
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 1.3e-132 478.0 356 66.3
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.4e-126 458.0 310 71.6
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 5.4e-118 429.5 358 61.7
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.7e-111 407.9 695 37.4
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 3.9e-108 396.7 401 55.6
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.1e-105 387.1 309 61.8
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.5e-96 358.2 343 55.1
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.6e-93 348.2 337 54.9
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 5.1e-92 343.2 656 34.0
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 1.1e-89 335.5 366 49.5
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.8e-84 318.2 693 32.9
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.4e-81 308.5 371 47.4
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.6e-77 295.0 641 33.9
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 6.3e-74 283.1 320 50.6
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.1e-73 280.8 605 32.4
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 3.6e-69 267.3 311 52.7
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 1.3e-63 248.8 554 32.9
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.9e-63 247.7 398 41.0
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.1e-46 192.6 159 54.7
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.5e-46 192.2 331 40.2
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 2.1e-45 188.3 183 55.7
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.7e-42 178.7 251 41.0
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 1.8e-41 175.3 183 49.7
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 6.1e-37 160.2 136 57.4
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 3.4e-35 154.5 124 57.3
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 5.7e-35 153.7 240 39.6
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.3e-31 142.5 185 43.2
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 5.0e-31 140.6 136 44.1
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.2e-21 109.4 164 40.2
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 5.8e-19 100.5 77 63.6
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 2.4e-17 95.1 125 44.8
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.2e-17 94.7 298 28.2
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 9.2e-17 93.2 174 36.8
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.7e-16 91.7 114 49.1
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 6.0e-16 90.5 81 56.8
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 2.5e-14 85.1 296 25.0
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 1.1e-09 69.7 214 28.5
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 4.1e-09 67.8 65 44.6
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 1.0e-07 63.2 148 33.1
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 3.0e-07 61.6 221 23.5


User provided reference genes

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