Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0055600 Salix brachista HOM05D003349 ORTHO05D350155 0.0e+00 1110.1 637 100.0
Sabra18G0055700 Salix brachista HOM05D003349 ORTHO05D350099 3.9e-194 682.2 768 57.2
Sabra19G0041800 Salix brachista HOM05D003349 ORTHO05D003898 7.2e-15 86.7 58 75.9
Sabra11G0089600 Salix brachista HOM05D003349 ORTHO05D003898 9.5e-15 86.3 58 75.9
Potri.019G033900 Populus trichocarpa HOM05D003349 ORTHO05D003898 1.2e-14 85.9 58 74.1
Sabra11G0092800 Salix brachista HOM05D001236 ORTHO05D001090 2.7e-14 84.7 58 74.1
Potri.013G058700 Populus trichocarpa HOM05D003349 ORTHO05D003898 6.1e-14 83.6 58 72.4
Sabra13G0052200 Salix brachista HOM05D003349 ORTHO05D003898 6.1e-14 83.6 58 72.4
Cpa.g.sc51.107 Carica papaya HOM05D003349 ORTHO05D003898 4.0e-13 80.9 59 69.5
CiPaw.06G089600 Carya illinoinensis HOM05D003349 ORTHO05D003898 5.2e-13 80.5 58 70.7
Manes.09G142100 Manihot esculenta HOM05D003349 ORTHO05D003898 5.2e-13 80.5 60 66.7
Thecc.05G293700 Theobroma cacao HOM05D003349 ORTHO05D003898 1.2e-12 79.3 58 69.0
Duzib128G1865 Durio zibethinus HOM05D003349 ORTHO05D003898 1.5e-12 79.0 58 69.0
Haze_19412 Corylus avellana HOM05D003349 ORTHO05D003898 2.0e-12 78.6 58 69.0
CiPaw.09G001500 Carya illinoinensis HOM05D003349 ORTHO05D003898 2.6e-12 78.2 58 69.0
Manes.08G150100 Manihot esculenta HOM05D003349 ORTHO05D003898 2.6e-12 78.2 58 67.2
Ciclev10019371m.g Citrus clementina HOM05D003349 ORTHO05D003898 3.4e-12 77.8 58 69.0
Duzib177G0419 Durio zibethinus HOM05D003349 ORTHO05D003898 3.4e-12 77.8 58 69.0
Gohir.A11G259100 Gossypium hirsutum HOM05D003349 ORTHO05D003898 3.4e-12 77.8 58 69.0
Gohir.D11G269200 Gossypium hirsutum HOM05D003349 ORTHO05D003898 3.4e-12 77.8 58 69.0
Gorai.007G289100 Gossypium raimondii HOM05D003349 ORTHO05D003898 3.4e-12 77.8 58 69.0
COL.COLO4_13609 Corchorus olitorius HOM05D003349 ORTHO05D003898 4.4e-12 77.4 58 69.0
PGR042G2987 Punica granatum HOM05D003349 ORTHO05D003898 4.4e-12 77.4 58 67.2
PSO384G0567 Papaver somniferum HOM05D003349 ORTHO05D003898 5.7e-12 77.0 58 65.5
Hma1.2p1_0376F.1_g139170 Hydrangea macrophylla HOM05D003349 ORTHO05D003898 9.8e-12 76.3 58 67.2
PSO339G2750 Papaver somniferum HOM05D003349 ORTHO05D003898 9.8e-12 76.3 58 65.5
CDE07G0844 Ceratophyllum demersum HOM05D003349 ORTHO05D003898 2.8e-11 74.7 49 75.5
Hund19241 Selenicereus undatus HOM05D003349 ORTHO05D003898 2.8e-11 74.7 56 67.9
GSVIVG01033391001 Vitis vinifera HOM05D003349 ORTHO05D003898 2.8e-11 74.7 60 63.3
Atru.chr2.1365 Acer truncatum HOM05D003349 ORTHO05D003898 3.7e-11 74.3 58 65.5
Actinidia22087 Actinidia chinensis HOM05D003349 ORTHO05D003898 3.7e-11 74.3 56 67.9
CDE06G0484 Ceratophyllum demersum HOM05D003349 ORTHO05D003898 3.7e-11 74.3 49 75.5
Prupe.7G003500 Prunus persica HOM05D003349 ORTHO05D003898 3.7e-11 74.3 58 63.8
Cpa.g.sc51.102 Carica papaya HOM05D003349 ORTHO05D003898 4.9e-11 73.9 65 64.6
TAR369G0075 Trochodendron aralioides HOM05D003349 ORTHO05D003898 4.9e-11 73.9 56 67.9
Lj1g0027644 Lotus japonicus HOM05D003349 ORTHO05D003898 6.3e-11 73.6 57 63.2
THA.LOC104821510 Tarenaya hassleriana HOM05D003349 ORTHO05D003898 6.3e-11 73.6 58 63.8
Dinv37011 Davidia involucrata HOM05D003349 ORTHO05D003898 8.3e-11 73.2 58 65.5
Rhsim03G0001200 Rhododendron simsii HOM05D003349 ORTHO05D003898 8.3e-11 73.2 58 65.5
Medtr0495s0010 Medicago truncatula HOM05D003349 ORTHO05D003898 1.1e-10 72.8 58 62.1
Medtr6g032885 Medicago truncatula HOM05D003349 ORTHO05D003898 1.1e-10 72.8 58 62.1
Sabra15G0069100 Salix brachista HOM05D003349 ORTHO05D003898 1.1e-10 72.8 53 71.7
Sabra15G0069300 Salix brachista HOM05D003349 ORTHO05D003898 1.1e-10 72.8 53 71.7
Sabra15G0072800 Salix brachista HOM05D003349 ORTHO05D003898 1.1e-10 72.8 53 71.7
arahy.Tifrunner.gnm1.ann1.GFD0T8 Arachis hypogaea HOM05D003349 ORTHO05D003898 1.4e-10 72.4 58 62.1
arahy.Tifrunner.gnm1.ann1.N26BUN Arachis hypogaea HOM05D003349 ORTHO05D003898 1.4e-10 72.4 58 62.1
MSTRG.19938 Avicennia marina HOM05D003349 ORTHO05D003898 1.4e-10 72.4 55 67.3
Lj1A1137T83 Lonicera japonica HOM05D003349 ORTHO05D003898 1.4e-10 72.4 58 63.8
TWI60G1263 Tripterygium wilfordii HOM05D003349 ORTHO05D003898 1.4e-10 72.4 58 63.8
TAR633G2041 Trochodendron aralioides HOM05D003349 ORTHO05D003898 1.4e-10 72.4 58 63.8
Migut.J01894 Erythranthe guttata HOM05D003349 ORTHO05D003898 1.8e-10 72.0 55 67.3
Lsat_1_v5_gn_2_57641 Lactuca sativa HOM05D003349 ORTHO05D003898 1.8e-10 72.0 58 63.8
BcaB01g02049 Brassica carinata HOM05D003349 ORTHO05D003898 2.4e-10 71.6 58 62.1
BcaNung04049 Brassica carinata HOM05D003349 ORTHO05D003898 2.4e-10 71.6 58 62.1
BcaNung04050 Brassica carinata HOM05D003349 ORTHO05D003898 2.4e-10 71.6 58 62.1
A09p01870 Brassica napus HOM05D003349 ORTHO05D003898 2.4e-10 71.6 58 62.1
C09p01910 Brassica napus HOM05D003349 ORTHO05D003898 2.4e-10 71.6 58 62.1
BolC9t53126H Brassica oleracea HOM05D003349 ORTHO05D003898 2.4e-10 71.6 58 62.1
BraA09t35838Z Brassica rapa HOM05D003349 ORTHO05D003898 2.4e-10 71.6 58 62.1
CANSAT78G1787 Cannabis sativa HOM05D003349 ORTHO05D003898 2.4e-10 71.6 63 60.3
vmacro12571 Vaccinium macrocarpon HOM05D003349 ORTHO05D003898 2.4e-10 71.6 58 65.5
CSS0039180 Camellia sinensis var. sinensis HOM05D003349 ORTHO05D003898 3.1e-10 71.2 60 60.0
Cc06_g22870 Coffea canephora HOM05D003349 ORTHO05D003898 3.1e-10 71.2 62 59.7
SalBow6G1268 Salvia bowleyana HOM05D003349 ORTHO05D003898 3.1e-10 71.2 55 67.3
Aa31LG2G1970 Aethionema arabicum HOM05D003349 ORTHO05D003898 4.1e-10 70.9 58 62.1
Eucgr.K01495 Eucalyptus grandis HOM05D003349 ORTHO05D003898 5.4e-10 70.5 57 61.4
Thhalv10028548m.g Eutrema salsugineum HOM05D003349 ORTHO05D003898 5.4e-10 70.5 58 62.1
Sed0027207 Sechium edule HOM05D003349 ORTHO05D003898 5.4e-10 70.5 58 62.1
SGA_v2.0_scaffold24G10518 Striga asiatica HOM05D003349 ORTHO05D003898 5.4e-10 70.5 55 65.5
TPR.G34626 Trifolium pratense HOM05D003349 ORTHO05D003898 5.4e-10 70.5 57 61.4
QL07p020065 Quercus lobata HOM05D003349 ORTHO05D003898 7.0e-10 70.1 58 62.1
Sp6g02300 Schrenkiella parvula HOM05D003349 ORTHO05D003898 7.0e-10 70.1 48 72.9
TAR623G1645 Trochodendron aralioides HOM05D003349 ORTHO05D003898 7.0e-10 70.1 58 62.1
ATR0697G133 Amborella trichopoda HOM05D003349 ORTHO05D003898 9.2e-10 69.7 49 69.4
Aqoxy1G00500 Aquilegia oxysepala HOM05D003349 ORTHO05D003898 9.2e-10 69.7 49 69.4
AL1G64640 Arabidopsis lyrata HOM05D003349 ORTHO05D003898 9.2e-10 69.7 58 62.1
AT1G54385 Arabidopsis thaliana HOM05D003349 ORTHO05D003898 9.2e-10 69.7 58 62.1
CARHR055490 Cardamine hirsuta HOM05D003349 ORTHO05D003898 9.2e-10 69.7 58 62.1
Glyma.16G152900 Glycine max HOM05D003349 ORTHO05D003898 9.2e-10 69.7 58 58.6
Lsat_1_v5_gn_1_59620 Lactuca sativa HOM05D003349 ORTHO05D003898 9.2e-10 69.7 58 63.8
TAR636G3347 Trochodendron aralioides HOM05D003349 ORTHO05D003898 9.2e-10 69.7 58 62.1
Carub.0002s0958 Capsella rubella HOM05D003349 ORTHO05D003898 1.2e-09 69.3 58 62.1
Lj2A357T88 Lonicera japonica HOM05D003349 ORTHO05D003898 1.2e-09 69.3 49 73.5
Oeu012406.1 Olea europaea HOM05D003349 ORTHO05D003898 1.2e-09 69.3 58 60.3
Sc19g0006470 Simmondsia chinensis HOM05D003349 ORTHO05D003898 1.2e-09 69.3 51 68.6
SGA_v2.0_scaffold118G32450 Striga asiatica HOM05D003349 ORTHO05D003898 1.2e-09 69.3 55 65.5
EL10Ac3g06814 Beta vulgaris HOM05D003349 ORTHO05D003898 1.6e-09 68.9 56 62.5
CsaV3_4G013310 Cucumis sativus L. HOM05D003349 ORTHO05D003898 1.6e-09 68.9 57 61.4
Sed0005648 Sechium edule HOM05D003349 ORTHO05D003898 1.6e-09 68.9 58 60.3
CAN.G317.13 Capsicum annuum HOM05D003349 ORTHO05D003898 2.0e-09 68.6 49 69.4
Ca_21768_v3 Cicer arietinum L. HOM05D003349 ORTHO05D003898 2.0e-09 68.6 58 58.6
Glyma.02G071700 Glycine max HOM05D003349 ORTHO05D003898 2.0e-09 68.6 58 58.6
RcHm_v2.0_Chr3g0497191 Rosa chinensis HOM05D003349 ORTHO05D003898 2.0e-09 68.6 58 58.6
SHI21767 Sapria himalayana HOM05D003349 ORTHO05D003898 2.0e-09 68.6 58 56.9
Glyma.19G110600 Glycine max HOM05D003349 ORTHO05D003898 2.7e-09 68.2 49 71.4
Lalb_Chr02g0157061 Lupinus albus HOM05D003349 ORTHO05D003898 2.7e-09 68.2 58 60.3
Psat1g096120 Pisum sativum HOM05D003349 ORTHO05D003898 2.7e-09 68.2 58 58.6
TWI34G0012 Tripterygium wilfordii HOM05D003349 ORTHO05D003898 2.7e-09 68.2 58 62.1
VMungo1383G1871 Vigna mungo HOM05D003349 ORTHO05D003898 2.7e-09 68.2 58 60.3
Zm00001eb200470 Zea mays HOM05D003349 ORTHO05D003898 2.7e-09 68.2 55 61.8
ClCG04G005280 Citrullus lanatus HOM05D003349 ORTHO05D003898 3.5e-09 67.8 57 59.6
MELO3C008798.2 Cucumis melo HOM05D003349 ORTHO05D003898 3.5e-09 67.8 57 59.6
Os11g0580000 Oryza sativa ssp. japonica HOM05D003349 ORTHO05D003898 3.5e-09 67.8 49 67.3
Peaxi162Scf00076g01031 Petunia axillaris HOM05D003349 ORTHO05D003898 3.5e-09 67.8 49 69.4
PGSC0003DMG400008643 Solanum tuberosum HOM05D003349 ORTHO05D003898 3.5e-09 67.8 49 69.4
HanXRQChr01g0024711 Helianthus annuus HOM05D003349 ORTHO05D003898 4.5e-09 67.4 57 61.4
Nn2g15886 Nelumbo nucifera HOM05D003349 ORTHO05D003898 4.5e-09 67.4 63 55.6
unitig_899.g15643 Utricularia gibba HOM05D003349 ORTHO05D003898 4.5e-09 67.4 55 63.6
Ca_25618_v3 Cicer arietinum L. HOM05D003349 ORTHO05D003898 5.9e-09 67.0 57 59.6
ECA285G0003 Erigeron canadensis HOM05D003349 ORTHO05D003898 5.9e-09 67.0 54 63.0
FvH4_1g28060 Fragaria vesca HOM05D003349 ORTHO05D003898 7.7e-09 66.6 58 56.9
FAN19G0867 Fragaria x ananassa HOM05D003349 ORTHO05D003898 7.7e-09 66.6 58 56.9
FAN23G0882 Fragaria x ananassa HOM05D003349 ORTHO05D003898 7.7e-09 66.6 58 56.9
FAN26G3194 Fragaria x ananassa HOM05D003349 ORTHO05D003898 7.7e-09 66.6 58 56.9
Glyma.16G041800 Glycine max HOM05D003349 ORTHO05D003898 7.7e-09 66.6 49 69.4
Nitab4.5_0000001g0070 Nicotiana tabacum HOM05D003349 ORTHO05D003898 7.7e-09 66.6 49 67.3
ECA238G0201 Erigeron canadensis HOM05D003349 ORTHO05D003898 1.0e-08 66.2 55 61.8
Lj2g0007320 Lotus japonicus HOM05D003349 ORTHO05D003898 1.0e-08 66.2 58 56.9
Lalb_Chr06g0173961 Lupinus albus HOM05D003349 ORTHO05D003898 1.0e-08 66.2 58 55.2
Oeu060005.1 Olea europaea HOM05D003349 ORTHO05D003898 1.0e-08 66.2 53 62.3
Sopen03g015010 Solanum pennellii HOM05D003349 ORTHO05D003898 1.0e-08 66.2 49 67.3
HPP92_004178 Vanilla planifolia HOM05D003349 ORTHO05D003898 1.0e-08 66.2 49 63.3
AUR62032062 Chenopodium quinoa HOM05D003349 ORTHO05D003898 1.3e-08 65.9 56 64.3
Nn7g35824 Nelumbo nucifera HOM05D003349 ORTHO05D003898 1.7e-08 65.5 56 62.5
DCAR_019880 Daucus carota HOM05D003349 ORTHO05D003898 2.3e-08 65.1 49 65.3
CANSAT56G0778 Cannabis sativa HOM05D003349 ORTHO05D003898 2.9e-08 64.7 58 55.2
Lalb_Chr21g0317171 Lupinus albus HOM05D003349 ORTHO05D003898 6.6e-08 63.5 58 56.9
Nn4g24247 Nelumbo nucifera HOM05D003349 ORTHO05D003898 6.6e-08 63.5 62 53.2
AUR62032685 Chenopodium quinoa HOM05D003349 ORTHO05D003898 8.6e-08 63.2 56 62.5
DCAR_009680 Daucus carota HOM05D003349 ORTHO05D003898 8.6e-08 63.2 49 65.3
HanXRQChr09g0266371 Helianthus annuus HOM05D003349 ORTHO05D003898 1.1e-07 62.8 50 70.0
MD12G1003000 Malus domestica HOM05D003349 ORTHO05D003898 1.1e-07 62.8 58 56.9
FvH4_5g28880 Fragaria vesca HOM05D003349 ORTHO05D003898 1.5e-07 62.4 48 64.6
FAN13G1757 Fragaria x ananassa HOM05D003349 ORTHO05D003898 1.5e-07 62.4 48 64.6
FAN18G3983 Fragaria x ananassa HOM05D003349 ORTHO05D003898 1.5e-07 62.4 48 64.6
Phvul.004G079400 Phaseolus vulgaris HOM05D003349 ORTHO05D003898 1.5e-07 62.4 59 54.2
PGR142G2675 Punica granatum HOM05D003349 ORTHO05D003898 1.9e-07 62.0 57 54.4
AagrBONN_evm.TU.Sc2ySwM_117.2517 Anthoceros agrestis HOM05D003349 ORTHO05D003898 3.3e-07 61.2 55 54.5
Nn5g30180 Nelumbo nucifera HOM05D003349 ORTHO05D003898 3.3e-07 61.2 76 47.4
Phvul.001G110000 Phaseolus vulgaris HOM05D003349 ORTHO05D003898 4.3e-07 60.8 49 69.4
Mapoly0001s0286 Marchantia polymorpha HOM05D003349 ORTHO05D003898 1.6e-06 58.9 54 53.7
THA.LOC104820732 Tarenaya hassleriana HOM05D003349 ORTHO05D003898 2.8e-06 58.2 70 44.3
arahy.Tifrunner.gnm1.ann1.L5U228 Arachis hypogaea HOM05D003349 ORTHO05D003898 6.1e-06 57.0 58 51.7
Pp3c5_7300 Physcomitrium patens HOM05D003349 ORTHO05D003898 6.1e-06 57.0 71 46.5


User provided reference genes

Program Settings