Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0053300 Salix brachista HOM05D003986 ORTHO05D004916 2.0e-115 419.1 207 100.0
Sabra18G0052900 Salix brachista HOM05D003986 ORTHO05D004916 3.2e-97 358.6 227 81.5
Sabra18G0053600 Salix brachista HOM05D003986 ORTHO05D004916 3.2e-97 358.6 227 81.5
Sabra18G0053500 Salix brachista HOM05D003986 ORTHO05D004916 4.2e-97 358.2 227 81.1
Sabra18G0054000 Salix brachista HOM05D003986 ORTHO05D004916 1.2e-80 303.5 195 80.5
Sabra13G0078400 Salix brachista HOM05D003986 ORTHO05D004916 2.7e-19 99.8 125 48.8
Sabra18G0053100 Salix brachista HOM05D003986 ORTHO05D004078 1.4e-15 87.4 47 93.6
Sabra19G0063600 Salix brachista HOM05D003986 ORTHO05D004916 6.6e-10 68.6 69 52.2
COL.COLO4_06656 Corchorus olitorius HOM05D003986 ORTHO05D004916 7.3e-09 65.1 84 44.0
CsaV3_5G027880 Cucumis sativus L. HOM05D003986 ORTHO05D004916 7.3e-09 65.1 59 61.0
Lalb_Chr16g0387401 Lupinus albus HOM05D003986 ORTHO05D004916 1.2e-08 64.3 59 59.3
MELO3C005265.2 Cucumis melo HOM05D003986 ORTHO05D004916 1.6e-08 63.9 59 59.3
Potri.013G085000 Populus trichocarpa HOM05D003986 ORTHO05D004916 1.6e-08 63.9 59 59.3
Sed0014719 Sechium edule HOM05D003986 ORTHO05D004916 1.6e-08 63.9 59 59.3
Atru.chr11.800 Acer truncatum HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
arahy.Tifrunner.gnm1.ann1.374THF Arachis hypogaea HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
arahy.Tifrunner.gnm1.ann1.R76IPR Arachis hypogaea HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
CiPaw.06G055800 Carya illinoinensis HOM05D003986 ORTHO05D004916 2.1e-08 63.5 55 61.8
Glyma.05G241400 Glycine max HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
Glyma.08G048400 Glycine max HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
Lj4g0022556 Lotus japonicus HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
Manes.17G086100 Manihot esculenta HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
Phvul.002G324500 Phaseolus vulgaris HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
Psat7g004480 Pisum sativum HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
Potri.019G054600 Populus trichocarpa HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
VMungo0251G0132 Vigna mungo HOM05D003986 ORTHO05D004916 2.1e-08 63.5 59 57.6
ClCG01G006690 Citrullus lanatus HOM05D003986 ORTHO05D004916 3.6e-08 62.8 57 59.6
Eucgr.B02697 Eucalyptus grandis HOM05D003986 ORTHO05D004916 4.7e-08 62.4 55 60.0
Medtr8g106090 Medicago truncatula HOM05D003986 ORTHO05D004916 4.7e-08 62.4 59 55.9
QL03p038358 Quercus lobata HOM05D003986 ORTHO05D004916 4.7e-08 62.4 59 55.9
TPR.G12867 Trifolium pratense HOM05D003986 ORTHO05D004916 4.7e-08 62.4 59 55.9
CANSAT78G0669 Cannabis sativa HOM05D003986 ORTHO05D004916 6.2e-08 62.0 59 57.6
Cpa.g.sc2.149 Carica papaya HOM05D003986 ORTHO05D004916 6.2e-08 62.0 52 63.5
Gohir.A03G112200 Gossypium hirsutum HOM05D003986 ORTHO05D004916 6.2e-08 62.0 59 55.9
Gohir.D02G136832 Gossypium hirsutum HOM05D003986 ORTHO05D004916 6.2e-08 62.0 59 55.9
Gorai.005G152800 Gossypium raimondii HOM05D003986 ORTHO05D004916 6.2e-08 62.0 59 55.9
Lj3C862T8 Lonicera japonica HOM05D003986 ORTHO05D004916 6.2e-08 62.0 59 55.9
AL1G40240 Arabidopsis lyrata HOM05D003986 ORTHO05D004916 8.1e-08 61.6 59 55.9
AT1G24706 Arabidopsis thaliana HOM05D003986 ORTHO05D004916 8.1e-08 61.6 59 55.9
Carub.0001s2544 Capsella rubella HOM05D003986 ORTHO05D004916 8.1e-08 61.6 59 55.9
CARHR026420 Cardamine hirsuta HOM05D003986 ORTHO05D004916 8.1e-08 61.6 59 55.9
Lalb_Chr05g0222051 Lupinus albus HOM05D003986 ORTHO05D004916 8.1e-08 61.6 59 55.9
Aa31LG7G9380 Aethionema arabicum HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
Aqoxy3G04028 Aquilegia oxysepala HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
A08p26750 Brassica napus HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
C03p73260 Brassica napus HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
BolC3t19622H Brassica oleracea HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
BraA08t34620Z Brassica rapa HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
Haze_08333 Corylus avellana HOM05D003986 ORTHO05D004916 1.1e-07 61.2 50 64.0
PSO063G2585 Papaver somniferum HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
PSO782G5475 Papaver somniferum HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
PGR142G4089 Punica granatum HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
Sp1g23110 Schrenkiella parvula HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
THA.LOC104807876 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
THA.LOC104825570 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 1.1e-07 61.2 59 54.2
Actinidia12415 Actinidia chinensis HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
Ca_17244_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
Ca_29522_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
DCAR_026811 Daucus carota HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
Dinv11756 Davidia involucrata HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
Dinv14386 Davidia involucrata HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
ECA246G1343 Erigeron canadensis HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
HanXRQChr12g0381871 Helianthus annuus HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
Lsat_1_v5_gn_3_102381 Lactuca sativa HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
GSVIVG01011619001 Vitis vinifera HOM05D003986 ORTHO05D004916 1.4e-07 60.8 59 54.2
Ah.02g127910 Amaranthus hybridus HOM05D003986 ORTHO05D004916 1.8e-07 60.5 55 56.4
EL10Ac6g14201 Beta vulgaris HOM05D003986 ORTHO05D004916 1.8e-07 60.5 55 56.4
Nn4g24477 Nelumbo nucifera HOM05D003986 ORTHO05D004916 1.8e-07 60.5 59 54.2
Prupe.3G150800 Prunus persica HOM05D003986 ORTHO05D004916 1.8e-07 60.5 59 54.2
Sc14g0006590 Simmondsia chinensis HOM05D003986 ORTHO05D004916 1.8e-07 60.5 52 59.6
BcaB03g12045 Brassica carinata HOM05D003986 ORTHO05D004916 2.4e-07 60.1 47 63.8
Thhalv10006540m.g Eutrema salsugineum HOM05D003986 ORTHO05D004916 2.4e-07 60.1 57 54.4
Medtr7g117220 Medicago truncatula HOM05D003986 ORTHO05D004916 2.4e-07 60.1 59 54.2
Thecc.02G306600 Theobroma cacao HOM05D003986 ORTHO05D004916 2.4e-07 60.1 59 54.2
TWI74G0603 Tripterygium wilfordii HOM05D003986 ORTHO05D004916 2.4e-07 60.1 59 55.9
TAR629G0821 Trochodendron aralioides HOM05D003986 ORTHO05D004916 2.4e-07 60.1 59 52.5
CSS0009129 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 3.1e-07 59.7 59 52.5
CSS0026713 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 3.1e-07 59.7 59 52.5
AUR62014146 Chenopodium quinoa HOM05D003986 ORTHO05D004916 3.1e-07 59.7 57 52.6
SHI04403 Sapria himalayana HOM05D003986 ORTHO05D004916 3.1e-07 59.7 57 54.4
unitig_8.g4016 Utricularia gibba HOM05D003986 ORTHO05D004916 3.1e-07 59.7 57 54.4
HPP92_004743 Vanilla planifolia HOM05D003986 ORTHO05D004916 3.1e-07 59.7 59 54.2
Lalb_Chr18g0049821 Lupinus albus HOM05D003986 ORTHO05D004916 4.0e-07 59.3 47 66.0
Lalb_Chr18g0050041 Lupinus albus HOM05D003986 ORTHO05D004916 4.0e-07 59.3 47 66.0
Oeu006345.3 Olea europaea HOM05D003986 ORTHO05D004916 4.0e-07 59.3 59 52.5
AUR62038486 Chenopodium quinoa HOM05D003986 ORTHO05D004916 5.3e-07 58.9 55 54.5
MSTRG.2114 Avicennia marina HOM05D003986 ORTHO05D004916 6.9e-07 58.5 59 50.8
Migut.E00504 Erythranthe guttata HOM05D003986 ORTHO05D004916 6.9e-07 58.5 59 50.8
MBI18_g21002_MAGBIO Magnolia biondii HOM05D003986 ORTHO05D004916 6.9e-07 58.5 47 63.8
ATR0021G052 Amborella trichopoda HOM05D003986 ORTHO05D004916 9.0e-07 58.2 52 57.7
Ciclev10014076m.g Citrus clementina HOM05D003986 ORTHO05D004916 9.0e-07 58.2 47 61.7
MD09G1258800 Malus domestica HOM05D003986 ORTHO05D004916 9.0e-07 58.2 59 50.8
Nitab4.5_0000011g0120 Nicotiana tabacum HOM05D003986 ORTHO05D004916 1.2e-06 57.8 63 47.6
Hund24923 Selenicereus undatus HOM05D003986 ORTHO05D004916 1.5e-06 57.4 52 55.8
CDE05G3646 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 2.0e-06 57.0 59 49.2
SalBow2G1878 Salvia bowleyana HOM05D003986 ORTHO05D004916 2.6e-06 56.6 57 50.9
Solyc05g017890.4 Solanum lycopersicum HOM05D003986 ORTHO05D004916 2.6e-06 56.6 59 49.2
Sopen05g014610 Solanum pennellii HOM05D003986 ORTHO05D004916 2.6e-06 56.6 59 49.2
CAN.G206.116 Capsicum annuum HOM05D003986 ORTHO05D004916 4.4e-06 55.8 59 49.2
FAN22G0296 Fragaria x ananassa HOM05D003986 ORTHO05D004916 4.4e-06 55.8 52 55.8
Mapoly0001s0369 Marchantia polymorpha HOM05D003986 ORTHO05D004916 4.4e-06 55.8 52 53.8
SGA_v2.0_scaffold3G01767 Striga asiatica HOM05D003986 ORTHO05D004916 4.4e-06 55.8 57 50.9
AagrBONN_evm.TU.Sc2ySwM_368.2552 Anthoceros agrestis HOM05D003986 ORTHO05D004916 5.8e-06 55.5 57 47.4
Nitab4.5_0004735g0030 Nicotiana tabacum HOM05D003986 ORTHO05D004916 5.8e-06 55.5 59 47.5
Peaxi162Scf00937g00119 Petunia axillaris HOM05D003986 ORTHO05D004916 5.8e-06 55.5 59 47.5
FvH4_4g33200 Fragaria vesca HOM05D003986 ORTHO05D004916 9.9e-06 54.7 52 53.8
FAN07G2168 Fragaria x ananassa HOM05D003986 ORTHO05D004916 9.9e-06 54.7 52 53.8
FAN12G0920 Fragaria x ananassa HOM05D003986 ORTHO05D004916 9.9e-06 54.7 52 53.8
FAN17G2354 Fragaria x ananassa HOM05D003986 ORTHO05D004916 9.9e-06 54.7 52 53.8


User provided reference genes

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