Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 5.3e-149 532.3 671 100.0
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 8.7e-136 488.4 671 96.9
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 4.1e-69 266.9 584 86.8
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 4.7e-65 253.4 678 75.4
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 6.1e-65 253.1 583 81.3
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 1.4e-64 251.9 575 79.5
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 6.4e-62 243.0 178 71.3
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 2.0e-60 238.0 562 83.5
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 1.6e-57 228.4 562 81.0
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 8.0e-57 226.1 690 76.7
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 1.2e-55 222.2 565 83.9
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 1.2e-55 222.2 568 84.7
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 1.5e-55 221.9 589 85.9
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 3.4e-55 220.7 575 81.2
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 1.7e-54 218.4 582 85.6
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 3.7e-54 217.2 628 72.6
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 8.3e-54 216.1 571 83.4
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 8.3e-54 216.1 571 83.4
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 7.1e-53 213.0 544 82.2
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.2e-52 212.2 574 82.9
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 1.6e-52 211.8 672 64.4
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 2.7e-52 211.1 538 86.4
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.7e-52 211.1 573 82.9
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 7.8e-52 209.5 560 84.1
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 1.7e-51 208.4 193 60.1
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 8.6e-51 206.1 576 77.6
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 1.1e-50 205.7 188 61.2
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 2.5e-50 204.5 536 86.0
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 4.3e-50 203.8 565 83.2
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.1e-49 201.4 547 74.2
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 2.8e-49 201.1 568 80.3
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.8e-49 201.1 194 59.3
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 2.8e-49 201.1 501 88.2
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 3.6e-49 200.7 199 56.3
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 6.2e-49 199.9 526 82.7
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 6.2e-49 199.9 551 79.7
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 8.1e-49 199.5 567 82.9
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 1.1e-48 199.1 522 82.4
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 1.8e-48 198.4 535 82.4
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 8.9e-48 196.1 183 60.1
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 1.2e-47 195.7 568 82.0
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 1.2e-47 195.7 138 68.8
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 1.2e-47 195.7 671 68.6
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.5e-47 195.3 562 80.1
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 1.5e-47 195.3 559 80.0
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 4.4e-47 193.7 481 88.8
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 4.4e-47 193.7 508 84.4
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 5.8e-47 193.4 153 66.7
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 9.9e-47 192.6 525 81.5
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 2.2e-46 191.4 562 82.7
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 2.9e-46 191.0 174 59.2
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 4.9e-46 190.3 184 57.6
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 4.9e-46 190.3 560 66.4
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 6.4e-46 189.9 186 57.0
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 1.9e-45 188.3 182 56.6
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 7.1e-45 186.4 512 82.2
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 9.2e-45 186.0 180 55.6
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 9.2e-45 186.0 504 87.7
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 1.6e-44 185.3 666 75.8
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 2.7e-44 184.5 486 86.2
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 6.0e-44 183.3 174 56.3
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 6.0e-44 183.3 178 59.0
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 1.0e-43 182.6 189 56.1
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 1.0e-43 182.6 189 56.1
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 1.0e-43 182.6 189 56.1
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 1.3e-43 182.2 179 58.1
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 1.3e-43 182.2 119 73.9
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 1.7e-43 181.8 183 55.7
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 1.7e-43 181.8 144 61.1
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 2.3e-43 181.4 175 56.6
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 1.1e-42 179.1 167 57.5
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 1.5e-42 178.7 198 54.5
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 1.9e-42 178.3 557 72.4
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 2.5e-42 177.9 175 55.4
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 2.5e-42 177.9 175 55.4
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 4.3e-42 177.2 180 54.4
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 7.3e-42 176.4 188 53.7
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 9.6e-42 176.0 188 57.4
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 1.2e-41 175.6 181 54.7
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 2.4e-40 171.4 150 59.3
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 8.9e-40 169.5 101 83.2
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 8.9e-40 169.5 141 60.3
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 8.9e-40 169.5 141 60.3
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 4.4e-39 167.2 106 75.5
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 2.9e-38 164.5 556 81.8
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 5.4e-37 160.2 102 75.5
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 4.6e-36 157.1 112 68.8
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 1.7e-35 155.2 122 59.0
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 1.9e-34 151.8 183 42.6
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 8.4e-30 136.3 77 80.5
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 7.9e-28 129.8 71 85.9
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 2.3e-27 128.3 143 49.7
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 3.9e-27 127.5 442 86.9
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 9.9e-23 112.8 65 80.0
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 3.0e-19 101.3 121 43.0
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 1.1e-18 99.4 120 42.5
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 1.5e-18 99.0 102 42.2
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 1.5e-18 99.0 102 42.2
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 4.3e-18 97.4 120 42.5
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 1.6e-17 95.5 53 81.1
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 3.1e-16 91.3 130 38.5
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 3.5e-12 77.8 59 59.3
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.9e-10 72.0 39 84.6
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 3.7e-09 67.8 47 76.6
FAN02G2590 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.1e-08 66.2 43 72.1
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 4.1e-08 64.3 47 72.3
GSVIVG01018090001 Vitis vinifera HOM05D002479 ORTHO05D002675 3.8e-06 57.8 77 33.8
Nitab4.5_0001047g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 5.0e-06 57.4 106 30.2
CANSAT78G2316 Cannabis sativa HOM05D002479 ORTHO05D002675 6.5e-06 57.0 61 34.4
Nitab4.5_0003787g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 6.5e-06 57.0 106 30.2
Glyma.08G174800 Glycine max HOM05D002479 ORTHO05D002675 8.4e-06 56.6 125 27.2
Solyc11g006700.1 Solanum lycopersicum HOM05D000001 ORTHO05D000003 8.4e-06 56.6 106 29.2
HPP92_016533 Vanilla planifolia HOM05D002479 ORTHO05D002675 8.4e-06 56.6 73 39.7


User provided reference genes

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