Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0060100 Salix brachista HOM05D005049 ORTHO05D006032 1.8e-122 442.6 216 100.0
Potri.017G073200 Populus trichocarpa HOM05D005049 ORTHO05D006032 1.4e-90 336.7 216 79.6
Manes.17G121600 Manihot esculenta HOM05D005049 ORTHO05D006032 6.4e-72 274.6 210 64.3
Prupe.3G284100 Prunus persica HOM05D005049 ORTHO05D006032 1.1e-68 263.8 216 61.1
Actinidia35742 Actinidia chinensis HOM05D005049 ORTHO05D006032 4.3e-68 261.9 210 62.4
Psat1g056840 Pisum sativum HOM05D005049 ORTHO05D006032 5.6e-68 261.5 215 59.5
Haze_14669 Corylus avellana HOM05D005049 ORTHO05D006032 1.6e-67 260.0 221 57.9
TAR622G0573 Trochodendron aralioides HOM05D005049 ORTHO05D006032 1.6e-67 260.0 214 60.7
MD17G1034700 Malus domestica HOM05D005049 ORTHO05D006032 2.1e-67 259.6 216 61.1
CSS0003936 Camellia sinensis var. sinensis HOM05D005049 ORTHO05D006032 3.6e-67 258.8 210 61.0
Medtr6g007165 Medicago truncatula HOM05D005049 ORTHO05D006032 6.2e-67 258.1 216 58.3
Nn4g22794 Nelumbo nucifera HOM05D005049 ORTHO05D006032 1.8e-66 256.5 210 60.5
RcHm_v2.0_Chr2g0171441 Rosa chinensis HOM05D005049 ORTHO05D006032 4.0e-66 255.4 216 61.6
QL02p076639 Quercus lobata HOM05D005049 ORTHO05D006032 8.9e-66 254.2 211 56.4
Sc07g0003030 Simmondsia chinensis HOM05D005049 ORTHO05D006032 8.9e-66 254.2 220 58.6
Duzib264G0847 Durio zibethinus HOM05D005049 ORTHO05D006032 1.2e-65 253.8 210 61.0
Cpa.g.sc39.89 Carica papaya HOM05D005049 ORTHO05D006032 2.0e-65 253.1 210 61.0
Dinv35060 Davidia involucrata HOM05D005049 ORTHO05D006032 2.0e-65 253.1 210 60.0
HanXRQChr07g0198731 Helianthus annuus HOM05D005049 ORTHO05D006032 2.6e-65 252.7 210 58.6
Nitab4.5_0003337g0090 Nicotiana tabacum HOM05D005049 ORTHO05D006032 2.6e-65 252.7 216 58.8
ECA238G2197 Erigeron canadensis HOM05D005049 ORTHO05D006032 3.4e-65 252.3 210 59.5
VMungo0464G1607 Vigna mungo HOM05D005049 ORTHO05D006032 4.4e-65 251.9 210 58.6
Hma1.2p1_0858F.1_g229450 Hydrangea macrophylla HOM05D005049 ORTHO05D006032 5.8e-65 251.5 217 58.5
TPR.G2274 Trifolium pratense HOM05D005049 ORTHO05D006032 5.8e-65 251.5 215 57.7
GSVIVG01032478001 Vitis vinifera HOM05D005049 ORTHO05D006032 5.8e-65 251.5 201 60.7
Nitab4.5_0005176g0050 Nicotiana tabacum HOM05D005049 ORTHO05D006032 7.5e-65 251.1 220 58.6
Aqoxy3G01017 Aquilegia oxysepala HOM05D005049 ORTHO05D006032 9.8e-65 250.8 216 56.9
Cfa007428 Carpinus fangiana HOM05D005049 ORTHO05D006032 9.8e-65 250.8 211 57.8
Glyma.13G168600 Glycine max HOM05D005049 ORTHO05D006032 1.3e-64 250.4 210 58.1
CiPaw.03G037900 Carya illinoinensis HOM05D005049 ORTHO05D006032 2.2e-64 249.6 210 57.6
Eucgr.I01812 Eucalyptus grandis HOM05D005049 ORTHO05D006032 3.7e-64 248.8 212 59.9
CAN.G206.31 Capsicum annuum HOM05D005049 ORTHO05D006032 4.9e-64 248.4 216 58.3
Duzib147G1079 Durio zibethinus HOM05D005049 ORTHO05D006032 8.3e-64 247.7 210 59.5
Thecc.04G008900 Theobroma cacao HOM05D005049 ORTHO05D006032 1.1e-63 247.3 210 59.5
Actinidia36083 Actinidia chinensis HOM05D005049 ORTHO05D006032 1.9e-63 246.5 210 56.7
Gohir.A09G026200 Gossypium hirsutum HOM05D005049 ORTHO05D006032 2.4e-63 246.1 210 60.0
CANSAT64G0408 Cannabis sativa HOM05D005049 ORTHO05D006032 3.2e-63 245.7 210 58.6
Glyma.06G185500 Glycine max HOM05D005049 ORTHO05D006032 4.1e-63 245.4 214 57.5
Phvul.004G014500 Phaseolus vulgaris HOM05D005049 ORTHO05D006032 4.1e-63 245.4 210 56.7
Atru.chr6.2298 Acer truncatum HOM05D005049 ORTHO05D006032 5.4e-63 245.0 214 58.4
Lj2g0009991 Lotus japonicus HOM05D005049 ORTHO05D006032 1.2e-62 243.8 235 53.6
Ah.11g045070 Amaranthus hybridus HOM05D005049 ORTHO05D006032 2.0e-62 243.0 216 57.4
Ciclev10015290m.g Citrus clementina HOM05D005049 ORTHO05D006032 2.0e-62 243.0 210 57.6
Gorai.006G029800 Gossypium raimondii HOM05D005049 ORTHO05D006032 2.7e-62 242.7 210 59.0
TWI12G0306 Tripterygium wilfordii HOM05D005049 ORTHO05D006032 6.0e-62 241.5 242 51.2
Lalb_Chr02g0160341 Lupinus albus HOM05D005049 ORTHO05D006032 1.0e-61 240.7 210 57.1
PGR142G2968 Punica granatum HOM05D005049 ORTHO05D006032 1.7e-61 240.0 214 57.9
Migut.H00120 Erythranthe guttata HOM05D005049 ORTHO05D006032 2.3e-61 239.6 208 55.3
Sopen02g031640 Solanum pennellii HOM05D005049 ORTHO05D006032 2.3e-61 239.6 216 56.0
SGA_v2.0_scaffold66G22479 Striga asiatica HOM05D005049 ORTHO05D006032 2.3e-61 239.6 216 53.2
Prupe.6G347800 Prunus persica HOM05D005049 ORTHO05D006032 3.9e-61 238.8 210 60.0
PGSC0003DMG400000525 Solanum tuberosum HOM05D005049 ORTHO05D006032 3.9e-61 238.8 216 56.0
EL10Ac2g02398 Beta vulgaris HOM05D005049 ORTHO05D006032 8.6e-61 237.7 216 56.0
Solyc02g086870.4 Solanum lycopersicum HOM05D005049 ORTHO05D006032 8.6e-61 237.7 216 55.6
CsaV3_3G042430 Cucumis sativus L. HOM05D005049 ORTHO05D006032 1.5e-60 236.9 209 59.8
Sed0008163 Sechium edule HOM05D005049 ORTHO05D006032 1.5e-60 236.9 210 59.5
MBI16_g40725_MAGBIO Magnolia biondii HOM05D005049 ORTHO05D006032 1.9e-60 236.5 210 54.8
MSTRG.3171 Avicennia marina HOM05D005049 ORTHO05D006032 2.5e-60 236.1 216 52.3
MELO3C009957.2 Cucumis melo HOM05D005049 ORTHO05D006032 2.5e-60 236.1 209 59.3
PSO478G2829 Papaver somniferum HOM05D005049 ORTHO05D006032 3.3e-60 235.7 215 56.3
PSO017G6025 Papaver somniferum HOM05D005049 ORTHO05D006032 4.7e-59 231.9 215 55.8
Oeu004708.3 Olea europaea HOM05D005049 ORTHO05D006032 1.4e-58 230.3 239 50.2
ATR0730G137 Amborella trichopoda HOM05D005049 ORTHO05D006032 3.1e-58 229.2 210 55.7
A04p13200 Brassica napus HOM05D005049 ORTHO05D006032 5.2e-58 228.4 210 55.7
BraA04t16979Z Brassica rapa HOM05D005049 ORTHO05D006032 5.2e-58 228.4 210 55.7
SGA_v2.0_scaffold205G41694 Striga asiatica HOM05D005049 ORTHO05D006032 6.8e-58 228.0 234 49.1
HPP92_021346 Vanilla planifolia HOM05D005049 ORTHO05D006032 1.5e-57 226.9 211 53.1
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 2.6e-57 226.1 210 54.8
Lsat_1_v5_gn_2_92181 Lactuca sativa HOM05D005049 ORTHO05D006032 2.6e-57 226.1 210 55.2
AT5G40280 Arabidopsis thaliana HOM05D005049 ORTHO05D006032 3.4e-57 225.7 210 54.8
C04p46950 Brassica napus HOM05D005049 ORTHO05D006032 5.8e-57 224.9 210 54.8
arahy.Tifrunner.gnm1.ann1.B7LRKU Arachis hypogaea HOM05D005049 ORTHO05D006032 1.7e-56 223.4 216 52.3
FvH4_6g50640 Fragaria vesca HOM05D005049 ORTHO05D006032 1.7e-56 223.4 210 56.2
Carub.0007s3535 Capsella rubella HOM05D005049 ORTHO05D006032 2.2e-56 223.0 210 54.8
Thhalv10027764m.g Eutrema salsugineum HOM05D005049 ORTHO05D006032 2.2e-56 223.0 210 53.3
Aa31LG9G1340 Aethionema arabicum HOM05D005049 ORTHO05D006032 4.9e-56 221.9 210 53.3
BolC4t26289H Brassica oleracea HOM05D005049 ORTHO05D006032 4.9e-56 221.9 218 52.8
arahy.Tifrunner.gnm1.ann1.41NV30 Arachis hypogaea HOM05D005049 ORTHO05D006032 1.1e-55 220.7 216 51.9
arahy.Tifrunner.gnm1.ann1.EYLE23 Arachis hypogaea HOM05D005049 ORTHO05D006032 1.1e-55 220.7 216 51.9
BcaB06g27470 Brassica carinata HOM05D005049 ORTHO05D006032 1.1e-55 220.7 215 52.6
CARHR261810 Cardamine hirsuta HOM05D005049 ORTHO05D006032 1.2e-54 217.2 210 52.9
MD09G1034200 Malus domestica HOM05D005049 ORTHO05D006032 1.2e-54 217.2 221 54.3
Sp7g01660 Schrenkiella parvula HOM05D005049 ORTHO05D006032 2.1e-54 216.5 210 53.3
Zm00001eb153900 Zea mays HOM05D005049 ORTHO05D006032 6.0e-54 214.9 211 52.6
A04p15750 Brassica napus HOM05D005049 ORTHO05D006032 1.0e-53 214.2 206 53.9
BraA04t17209Z Brassica rapa HOM05D005049 ORTHO05D006032 1.0e-53 214.2 206 53.9
THA.LOC104805397 Tarenaya hassleriana HOM05D005049 ORTHO05D006032 1.3e-53 213.8 218 51.8
AUR62040116 Chenopodium quinoa HOM05D005049 ORTHO05D006032 3.6e-51 205.7 192 54.2
HPP92_021351 Vanilla planifolia HOM05D005049 ORTHO05D006032 8.1e-51 204.5 179 56.4
Pp3c14_3780 Physcomitrium patens HOM05D005049 ORTHO05D006032 5.4e-47 191.8 216 46.3
DCAR_015040 Daucus carota HOM05D005049 ORTHO05D006032 9.2e-47 191.0 139 68.3
FAN14G5348 Fragaria x ananassa HOM05D005049 ORTHO05D006032 3.5e-46 189.1 210 50.5
vmacro05822 Vaccinium macrocarpon HOM05D005049 ORTHO05D006032 3.0e-45 186.0 225 45.8
Ca_04197_v3 Cicer arietinum L. HOM05D005049 ORTHO05D006032 5.6e-44 181.8 149 61.1
Mapoly0123s0027 Marchantia polymorpha HOM05D005049 ORTHO05D006032 1.1e-42 177.6 209 45.9
AagrBONN_evm.TU.Sc2ySwM_117.2022 Anthoceros agrestis HOM05D005049 ORTHO05D006032 1.4e-42 177.2 203 44.3
SMO172G0207 Selaginella moellendorffii HOM05D005049 ORTHO05D006032 1.7e-40 170.2 210 42.9
Hund02271 Selenicereus undatus HOM05D005049 ORTHO05D006032 3.8e-40 169.1 192 49.0
CBR_g12691 Chara braunii HOM05D005049 ORTHO05D006032 2.1e-38 163.3 207 42.0
AUR62032496 Chenopodium quinoa HOM05D005049 ORTHO05D006032 4.6e-38 162.2 169 51.5
FAN14G3165 Fragaria x ananassa HOM05D005049 ORTHO05D006032 4.6e-38 162.2 179 49.7
BcaB06g27754 Brassica carinata HOM05D005049 ORTHO05D006032 7.3e-36 154.8 190 47.9
unitig_52.g17670 Utricularia gibba HOM05D005049 ORTHO05D006032 2.4e-34 149.8 116 52.6
Cc07_g02260 Coffea canephora HOM05D005049 ORTHO05D006032 1.2e-33 147.5 102 61.8
Lj9C583G13 Lonicera japonica HOM05D005049 ORTHO05D006032 5.8e-33 145.2 96 65.6
FAN02G4030 Fragaria x ananassa HOM05D005049 ORTHO05D006032 2.4e-31 139.8 111 58.6
MCO05G513 Micromonas commoda HOM05D005049 ORTHO05D006032 3.5e-30 136.0 183 39.3
PRCOL_00002137 Prasinoderma coloniale HOM05D005049 ORTHO05D006032 3.3e-28 129.4 177 41.8
Cre14.g612500 Chlamydomonas reinhardtii HOM05D005049 ORTHO05D006032 1.6e-27 127.1 210 37.6
Lj7A514T33 Lonicera japonica HOM05D005049 ORTHO05D006032 3.8e-24 115.9 115 56.5
C04p50070 Brassica napus HOM05D005049 ORTHO05D006032 3.2e-23 112.8 147 42.2
Gohir.D09G025601 Gossypium hirsutum HOM05D005049 ORTHO05D006032 3.0e-21 106.3 84 69.0
ECA236G0066 Erigeron canadensis HOM05D000454 ORTHO05D006032 2.5e-20 103.2 84 64.3
Peaxi162Scf00129g01124 Petunia axillaris HOM05D005049 ORTHO05D006032 2.5e-20 103.2 84 64.3
Cc07_g02250 Coffea canephora HOM05D005049 ORTHO05D006032 1.3e-19 100.9 84 63.1
Hma1.2p1_0802F.1_g220350 Hydrangea macrophylla HOM05D005049 ORTHO05D006032 4.5e-17 92.4 96 44.8
ClCG10G014210 Citrullus lanatus HOM05D005049 ORTHO05D006032 5.1e-13 79.0 48 81.2
Haze_27246 Corylus avellana HOM05D005049 ORTHO05D006032 1.1e-12 77.8 129 37.2
COL.COLO4_28950 Corchorus olitorius HOM05D005049 ORTHO05D006032 2.5e-12 76.6 107 39.3
Glyma.06G243150 Glycine max HOM05D005049 ORTHO05D006032 1.1e-10 71.2 46 71.7
Os01g0737800 Oryza sativa ssp. japonica HOM05D005049 ORTHO05D006032 4.5e-09 65.9 60 51.7
Glyma.19G008900 Glycine max HOM05D005049 ORTHO05D006032 8.5e-08 61.6 60 50.0


User provided reference genes

Program Settings